Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq1 378 9e-100
seq2 116 5e-21
>seq1
Length=8525130
Score = 378 bits (418), Expect = 9e-100
Identities = 1043/1589 (66%), Gaps = 21/1589 (1%)
Strand=Plus/Plus
Query 6565 CTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTT 6624
||| || ||||| || || ||||| || ||||| | ||||| |||||||| || ||
Sbjct 1959009 CTTCTCGTCTTCCTCCTTGTACTTCTCAGCATCAGCAAGCATCTGCTCAATGTCCTCCTT 1959068
Query 6625 CGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATC 6684
|| | | ||||| || || || || |||||| | ||| || || | |||| ||
Sbjct 1959069 GGAGAGGCGGCCCTTGTCGTTGGTGATGACAATCTTATTGGACTTGCCAGTACCCTTCTC 1959128
Query 6685 TTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGG 6744
| || || |||| ||||| || |||||||||||||| | || | ||| || ||
Sbjct 1959129 GACGGCGGAGACGTTCATGATACCGTTGGCATCAACATCGAAGGTGACCTCAATCTGGGG 1959188
Query 6745 TGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATC 6804
||| | || || | || || || || | || || | || || || |||| ||
Sbjct 1959189 AACACCACGGGGGGCAGGGGGGATGCCAGTGAGCTCGAACTTGCCGAGCAAGTTGTTGTC 1959248
Query 6805 CGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATT--GTCACCGCAGGTTGATTATCT 6862
| | | || ||| ||||| || ||||| | || | ||||| || || || ||
Sbjct 1959249 CTTGGTGCGCTGACGCTCACCCTCGTAGACCTGGATAAGGACACCG--GGCTGGTTGTCA 1959306
Query 6863 TGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACC 6922
|| ||||||| | ||||| | |||| || || || | || || | |
Sbjct 1959307 GAGAAGGTAGAGAAGACCTCGGACTTCTTGGTGGGAACGGTGGTGTTGCGGGGGATCAGC 1959366
Query 6923 GGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGT 6982
|||||| |||||||| ||| |||| || ||||| || || | || || | |||
Sbjct 1959367 TTGGTCATCATACCACCAGCAGTCTCGATACCGAGAGAGAGGGGAGCGACATCAAGGAGG 1959426
Query 6983 AACAGGTCTT--GAACAGATTC-GTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTC 7039
| | || | | || | | | ||||| | | ||| || || ||||| |
Sbjct 1959427 AGGATTTCCTTGGTGGAGGTGGAGGTGGTGTCACCAGACAGGATAGCAGCCTGGACGGCA 1959486
Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099
|| ||||| || || |||||||||||||| || | || || | || || ||||| ||
Sbjct 1959487 GCACCGTAAGCAACAGCCTCATCGGGGTTGATGGACTTGTTGGGCTCCTTGCCGTTGAAG 1959546
Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159
|| || | | | | || || ||||| || || || |||||||| | ||| ||
Sbjct 1959547 TAGTCGGTAATGAGCTTCTGGATGCGGGGGATACGGGTGGAACCACCGACGAGAACAATC 1959606
Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219
|| | || | || |||||||| | ||| ||| ||||| || | ||
Sbjct 1959607 TCGTGGACCTGGCTCTTGTCGATCTTGGCGTCAGCAAGGACACGGTCGACGGGCTGGATG 1959666
Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279
||||| | |||| || || || || ||||| |||||||| ||||| || |||
Sbjct 1959667 GTAGAGCGGAAGAGGTCCTGGCAAAGCTCTTCGAAACGAGCACGGGTGATGGAGGTGTAG 1959726
Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339
|| || | || ||| | | || || || ||||||| || || || | ||||| |
Sbjct 1959727 AAGTCGATACCCTCGAAGAGAGAGTCGATCTCAATGGAGGTCTGAGCGGAGGAAGAAAGG 1959786
Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399
|| ||||| || ||||| || || || || | ||| || | |||||| ||| |
Sbjct 1959787 GTACGCTTGGCACGCTCGCAAGCAGTGCGGAGACGGCGCATGGCACGGTTGTTTGATGTC 1959846
Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCG 7459
| |||||| || || ||||| || || | || ||||| || ||| | |||
Sbjct 1959847 AGATCTTTTTTGCTCTTGCGTTTGAATTCGTTAGCAAAGTGGTTAACGAGACGGTTGTCG 1959906
Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519
|| ||||||||||||||||| || || || || || | ||||| ||||||||||| |
Sbjct 1959907 AAGTCTTCACCACCCAAGTGGGTGTCACCAGCAGTGGACTTGACCTCAAAGATACCCTCC 1959966
Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTC 7579
|||||| | | | |||||||| || ||||||||||| || || || ||||| |||||
Sbjct 1959967 TCAATGGTGAGGAGAGAAACATCGAAGGTACCACCACCAAGATCGAAGATGAGGACGTTG 1960026
Query 7580 GTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTA 7639
||| || | ||||| || |||||||| || || || || || || || || ||
Sbjct 1960027 CGCTCGCCGGAGATCTTCTTGTCAAGACCGTAGGCAATGGCAGCGGCAGTAGGCTCGTTG 1960086
Query 7640 ATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGC 7699
|| ||||| || ||| ||||||||||| | ||||| || || || || || ||
Sbjct 1960087 ATGATACGGAGGACGTTGAGGCCAGCAATGAGACCGGCATCCTTGGTAGCCTGACGCTGA 1960146
Query 7700 GAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATAC 7759
|| ||||| |||||||| ||||| || | ||| |||| |||| | |||||| ||
Sbjct 1960147 GAGTCGTTGAAGTAGGCGGGGACAGTGATGACAGCGTTGTTGACGGTGCCACCGAGGTAA 1960206
Query 7760 GATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAAC 7819
| || || | || ||| ||| | || | ||| || || || || |||| | ||
Sbjct 1960207 GCCTCAGCAGTCTCGCGCATCTTGATGAGGATCATGGAAGAGATTTCCTCAGGGGTGAA- 1960265
Query 7820 TGTTTCGTT-TCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC---GGG 7875
|| | ||| || || || || ||||| || | ||||| || || |||| |
Sbjct 1960266 GGTCTTGTTCTCGCCCTTGAACTCAACCTCGACAATGGGCTT----GC--CACCCTTGTC 1960319
Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935
|| ||||| | | | | ||||||||| | ||||||| || || ||||| |
Sbjct 1960320 AATGACCTTGAAGGGGAAGTGCTTCATATCGGCCTGGACCTCAGCATCGGAGAACTTGCG 1960379
Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995
|| || |||||||| || || || || ||||| |||||||||||||| ||||||||
Sbjct 1960380 GCCAATGAGACGCTTGGCGTCGAAGACGGTGTTGTTGGGGTTCATGGCGACCTGGTTCTT 1960439
Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055
|| || || || || ||||| || | || || || |||||| | || || || ||
Sbjct 1960440 GGCGGCATCACCAATCAGACGCTC---GGTGTCGGTGAAAGCGACGAAAGAAGGAGTGGT 1960496
Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115
|| || || |||||||| || || || || ||||| | | |||| ||||| ||
Sbjct 1960497 ACGGTTACCCTGGTCGTTGGCGATGATGTCGCAACGGTCTTCACGGAAGACACCGACACA 1960556
Query 8116 CGAATACGTTGTTCCTAAATCAATACCGA 8144
|| || || || || ||||| |||||||
Sbjct 1960557 AGAGTAGGTGGTACCCAAATCGATACCGA 1960585
>seq2
Length=6006343
Score = 116 bits (128), Expect = 5e-21
Identities = 224/330 (68%), Gaps = 9/330 (3%)
Strand=Plus/Minus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
|||||| || | |||||||||||| ||||| || || || || ||||| |||| |||
Sbjct 4320332 ATCGAAGTCCTGACCACCCAAGTGAGTATCACCAGCAGTAGCCTTGACGGTGAAGACACC 4320273
Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575
|| | |||| | | || ||||| || ||||||||||| || || | ||||| ||
Sbjct 4320272 ACCCTGGATGTGGAGGAGGGAGACATCGAAAGTACCACCACCAAGATCGTAGATGAGGAC 4320213
Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCG------AGACCGTACGCGATAGCCGCCGCCGT 7629
||| || | ||| | |||| || |||||||| || || || || || ||
Sbjct 4320212 GTTGCGCTCCTTGTC---GGACTTACCGGCACCAAGACCGTAGGCAATGGCGGCAGCGGT 4320156
Query 7630 TGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGC 7689
|| || || || ||||| || ||| || |||||||| | | ||||| || || ||
Sbjct 4320155 AGGCTCGTTGATGATACGGAGGACGTTGAGACCAGCAATGGCACCAGCATCCTTGGTAGC 4320096
Query 7690 TTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTT 7749
|| || || ||||| |||||||| ||||| || | ||| || | | || |||||
Sbjct 4320095 CTGACGCTGGTTGTCGTTGAAGTAGGCGGGGACAGTGATGACAGCCTTCTCAACCTTCTT 4320036
Query 7750 ACCGAGATACGATTCCGCGATATCTTTCAT 7779
|| || | | || || || || |||||
Sbjct 4320035 GCCAAGCTTGGTCTCGGCAATCTCCTTCAT 4320006
Score = 86.0 bits (94), Expect = 8e-12
Identities = 138/196 (70%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656
||| ||||||||||| || | ||| || || || || || |||| | ||| ||| |||
Sbjct 761816 CTTCTCGAGACCGTAGGCAAGAGCAGCAGCAGTGGGCTCGTTAACGACACGGAGAACGTT 761875
Query 7657 CAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCT-TGTCGTTGCGAATCGTTAAAGTAGG 7715
||||||||||| | || || || || ||| || || || | |||||| ||||| |
Sbjct 761876 GAGGCCAGCAATCTGACCAGCGTCCTTGGT-GCTCTGACGCTGAGCATCGTTGAAGTAAG 761934
Query 7716 CCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTT 7775
| ||||| || ||||| |||| | | || ||| ||| || | || ||| | || |
Sbjct 761935 CAGGGACAGTGACGACGGCGTTCTTAACAGGCTTGGAGAGGTAAGCCTCAGCGGTCTCCT 761994
Query 7776 TCATTTTGGTAAGAAC 7791
|||| ||| | |||||
Sbjct 761995 TCATCTTGTTGAGAAC 762010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635132593581840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |