Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1 378 9e-100 seq2 116 5e-21 >seq1 Length=8525130 Score = 378 bits (418), Expect = 9e-100 Identities = 1043/1589 (66%), Gaps = 21/1589 (1%) Strand=Plus/Plus Query 6565 CTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTT 6624 ||| || ||||| || || ||||| || ||||| | ||||| |||||||| || || Sbjct 1959009 CTTCTCGTCTTCCTCCTTGTACTTCTCAGCATCAGCAAGCATCTGCTCAATGTCCTCCTT 1959068 Query 6625 CGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATC 6684 || | | ||||| || || || || |||||| | ||| || || | |||| || Sbjct 1959069 GGAGAGGCGGCCCTTGTCGTTGGTGATGACAATCTTATTGGACTTGCCAGTACCCTTCTC 1959128 Query 6685 TTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGG 6744 | || || |||| ||||| || |||||||||||||| | || | ||| || || Sbjct 1959129 GACGGCGGAGACGTTCATGATACCGTTGGCATCAACATCGAAGGTGACCTCAATCTGGGG 1959188 Query 6745 TGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATC 6804 ||| | || || | || || || || | || || | || || || |||| || Sbjct 1959189 AACACCACGGGGGGCAGGGGGGATGCCAGTGAGCTCGAACTTGCCGAGCAAGTTGTTGTC 1959248 Query 6805 CGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATT--GTCACCGCAGGTTGATTATCT 6862 | | | || ||| ||||| || ||||| | || | ||||| || || || || Sbjct 1959249 CTTGGTGCGCTGACGCTCACCCTCGTAGACCTGGATAAGGACACCG--GGCTGGTTGTCA 1959306 Query 6863 TGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACC 6922 || ||||||| | ||||| | |||| || || || | || || | | Sbjct 1959307 GAGAAGGTAGAGAAGACCTCGGACTTCTTGGTGGGAACGGTGGTGTTGCGGGGGATCAGC 1959366 Query 6923 GGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGT 6982 |||||| |||||||| ||| |||| || ||||| || || | || || | ||| Sbjct 1959367 TTGGTCATCATACCACCAGCAGTCTCGATACCGAGAGAGAGGGGAGCGACATCAAGGAGG 1959426 Query 6983 AACAGGTCTT--GAACAGATTC-GTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTC 7039 | | || | | || | | | ||||| | | ||| || || ||||| | Sbjct 1959427 AGGATTTCCTTGGTGGAGGTGGAGGTGGTGTCACCAGACAGGATAGCAGCCTGGACGGCA 1959486 Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || ||||| || || |||||||||||||| || | || || | || || ||||| || Sbjct 1959487 GCACCGTAAGCAACAGCCTCATCGGGGTTGATGGACTTGTTGGGCTCCTTGCCGTTGAAG 1959546 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 || || | | | | || || ||||| || || || |||||||| | ||| || Sbjct 1959547 TAGTCGGTAATGAGCTTCTGGATGCGGGGGATACGGGTGGAACCACCGACGAGAACAATC 1959606 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 || | || | || |||||||| | ||| ||| ||||| || | || Sbjct 1959607 TCGTGGACCTGGCTCTTGTCGATCTTGGCGTCAGCAAGGACACGGTCGACGGGCTGGATG 1959666 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 ||||| | |||| || || || || ||||| |||||||| ||||| || ||| Sbjct 1959667 GTAGAGCGGAAGAGGTCCTGGCAAAGCTCTTCGAAACGAGCACGGGTGATGGAGGTGTAG 1959726 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || || | || ||| | | || || || ||||||| || || || | ||||| | Sbjct 1959727 AAGTCGATACCCTCGAAGAGAGAGTCGATCTCAATGGAGGTCTGAGCGGAGGAAGAAAGG 1959786 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || ||||| || || || || | ||| || | |||||| ||| | Sbjct 1959787 GTACGCTTGGCACGCTCGCAAGCAGTGCGGAGACGGCGCATGGCACGGTTGTTTGATGTC 1959846 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCG 7459 | |||||| || || ||||| || || | || ||||| || ||| | ||| Sbjct 1959847 AGATCTTTTTTGCTCTTGCGTTTGAATTCGTTAGCAAAGTGGTTAACGAGACGGTTGTCG 1959906 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 || ||||||||||||||||| || || || || || | ||||| ||||||||||| | Sbjct 1959907 AAGTCTTCACCACCCAAGTGGGTGTCACCAGCAGTGGACTTGACCTCAAAGATACCCTCC 1959966 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTC 7579 |||||| | | | |||||||| || ||||||||||| || || || ||||| ||||| Sbjct 1959967 TCAATGGTGAGGAGAGAAACATCGAAGGTACCACCACCAAGATCGAAGATGAGGACGTTG 1960026 Query 7580 GTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTA 7639 ||| || | ||||| || |||||||| || || || || || || || || || Sbjct 1960027 CGCTCGCCGGAGATCTTCTTGTCAAGACCGTAGGCAATGGCAGCGGCAGTAGGCTCGTTG 1960086 Query 7640 ATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGC 7699 || ||||| || ||| ||||||||||| | ||||| || || || || || || Sbjct 1960087 ATGATACGGAGGACGTTGAGGCCAGCAATGAGACCGGCATCCTTGGTAGCCTGACGCTGA 1960146 Query 7700 GAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATAC 7759 || ||||| |||||||| ||||| || | ||| |||| |||| | |||||| || Sbjct 1960147 GAGTCGTTGAAGTAGGCGGGGACAGTGATGACAGCGTTGTTGACGGTGCCACCGAGGTAA 1960206 Query 7760 GATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAAC 7819 | || || | || ||| ||| | || | ||| || || || || |||| | || Sbjct 1960207 GCCTCAGCAGTCTCGCGCATCTTGATGAGGATCATGGAAGAGATTTCCTCAGGGGTGAA- 1960265 Query 7820 TGTTTCGTT-TCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC---GGG 7875 || | ||| || || || || ||||| || | ||||| || || |||| | Sbjct 1960266 GGTCTTGTTCTCGCCCTTGAACTCAACCTCGACAATGGGCTT----GC--CACCCTTGTC 1960319 Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935 || ||||| | | | | ||||||||| | ||||||| || || ||||| | Sbjct 1960320 AATGACCTTGAAGGGGAAGTGCTTCATATCGGCCTGGACCTCAGCATCGGAGAACTTGCG 1960379 Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995 || || |||||||| || || || || ||||| |||||||||||||| |||||||| Sbjct 1960380 GCCAATGAGACGCTTGGCGTCGAAGACGGTGTTGTTGGGGTTCATGGCGACCTGGTTCTT 1960439 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055 || || || || || ||||| || | || || || |||||| | || || || || Sbjct 1960440 GGCGGCATCACCAATCAGACGCTC---GGTGTCGGTGAAAGCGACGAAAGAAGGAGTGGT 1960496 Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 || || || |||||||| || || || || ||||| | | |||| ||||| || Sbjct 1960497 ACGGTTACCCTGGTCGTTGGCGATGATGTCGCAACGGTCTTCACGGAAGACACCGACACA 1960556 Query 8116 CGAATACGTTGTTCCTAAATCAATACCGA 8144 || || || || || ||||| ||||||| Sbjct 1960557 AGAGTAGGTGGTACCCAAATCGATACCGA 1960585 >seq2 Length=6006343 Score = 116 bits (128), Expect = 5e-21 Identities = 224/330 (68%), Gaps = 9/330 (3%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||| || | |||||||||||| ||||| || || || || ||||| |||| ||| Sbjct 4320332 ATCGAAGTCCTGACCACCCAAGTGAGTATCACCAGCAGTAGCCTTGACGGTGAAGACACC 4320273 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 || | |||| | | || ||||| || ||||||||||| || || | ||||| || Sbjct 4320272 ACCCTGGATGTGGAGGAGGGAGACATCGAAAGTACCACCACCAAGATCGTAGATGAGGAC 4320213 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCG------AGACCGTACGCGATAGCCGCCGCCGT 7629 ||| || | ||| | |||| || |||||||| || || || || || || Sbjct 4320212 GTTGCGCTCCTTGTC---GGACTTACCGGCACCAAGACCGTAGGCAATGGCGGCAGCGGT 4320156 Query 7630 TGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGC 7689 || || || || ||||| || ||| || |||||||| | | ||||| || || || Sbjct 4320155 AGGCTCGTTGATGATACGGAGGACGTTGAGACCAGCAATGGCACCAGCATCCTTGGTAGC 4320096 Query 7690 TTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTT 7749 || || || ||||| |||||||| ||||| || | ||| || | | || ||||| Sbjct 4320095 CTGACGCTGGTTGTCGTTGAAGTAGGCGGGGACAGTGATGACAGCCTTCTCAACCTTCTT 4320036 Query 7750 ACCGAGATACGATTCCGCGATATCTTTCAT 7779 || || | | || || || || ||||| Sbjct 4320035 GCCAAGCTTGGTCTCGGCAATCTCCTTCAT 4320006 Score = 86.0 bits (94), Expect = 8e-12 Identities = 138/196 (70%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656 ||| ||||||||||| || | ||| || || || || || |||| | ||| ||| ||| Sbjct 761816 CTTCTCGAGACCGTAGGCAAGAGCAGCAGCAGTGGGCTCGTTAACGACACGGAGAACGTT 761875 Query 7657 CAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCT-TGTCGTTGCGAATCGTTAAAGTAGG 7715 ||||||||||| | || || || || ||| || || || | |||||| ||||| | Sbjct 761876 GAGGCCAGCAATCTGACCAGCGTCCTTGGT-GCTCTGACGCTGAGCATCGTTGAAGTAAG 761934 Query 7716 CCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTT 7775 | ||||| || ||||| |||| | | || ||| ||| || | || ||| | || | Sbjct 761935 CAGGGACAGTGACGACGGCGTTCTTAACAGGCTTGGAGAGGTAAGCCTCAGCGGTCTCCT 761994 Query 7776 TCATTTTGGTAAGAAC 7791 |||| ||| | ||||| Sbjct 761995 TCATCTTGTTGAGAAC 762010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132593581840