Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1 251 9e-62 >seq1 Length=8525130 Score = 251 bits (278), Expect = 9e-62 Identities = 900/1391 (65%), Gaps = 27/1391 (2%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||| | ||||| ||||||| || || | || || |||| Sbjct 557473 CCCCAGCACATGATCATGAGAGTCGCTGTCGGTATTTGGGGTGACAACATCGAGCGTGTT 557414 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | ||||| ||| || ||||| | |||| ||| || | || ||||||||| Sbjct 557413 CTCGAGACCTACAACCTCATGTCTAACAAGTTCTTCACCCATGCCTCCCCTACCCTCTTC 557354 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 ||||| |||||||| ||| | || || ||| | ||| | ||||||||| Sbjct 557353 AACGCCGGTACACCCCAGTGCCAGCTTTCTTCCTGCTTCTTGGTTGACATGAAGGAGGAT 557294 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 || | || ||||||| || |||| |||||| ||||| ||| ||||||| Sbjct 557293 AGCATTGAGGGTATTTACGATACCCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGGT 557234 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAG-TCTCGTATTAGAGGTACAAA 111910 || || || | || ||| || | |||| || | ||| || ||||| || Sbjct 557233 GGCATTGGTCTCAACGCCCACCGCATCCGTGCCA-CAGGCTCTTACATCGCTGGTACCAA 557175 Query 111911 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 111970 ||| || | ||| | || || ||| | || || || ||| ||| || ||||| || Sbjct 557174 CGGTACCTCCAACGGTGTCATCCCCATGTTGCGTGTCTTCAACAACACCGCCCGCTACGT 557115 Query 111971 AAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 112024 |||||| ||| ||||| | || | |||| |||| |||||||| ||||| Sbjct 557114 CGACCAAGGTGGTAACAAGCGTCCC---GGTGCCTTCGCCATCTACCTTGAGCCCTGGCA 557058 Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTG 112084 ||| ||| || | ||||||||||| | || || || ||| | || || | || Sbjct 557057 CGCAGATGTCTTTGAGTTCCTTGACCTTCGCAAGAATCATGGTAAGGAAGAAGTCCGTGC 556998 Query 112085 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 112144 ||| ||||||||| |||||||||||||| ||||| ||||||||| | |||||| ||| Sbjct 556997 CCGTGATCTCTTCCTTGCTCTCTGGATTCCCGATCTTTTCATGAAGCGTGTTGAGAAGAA 556938 Query 112145 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGA 112204 || | ||| | ||| | || || || || || || || ||||| | ||||| Sbjct 556937 CGGAGAGTGGACCCTCATGTGCCCCAACGAGTGCCCTGGCCTTGCCGATTGCTACGGTGA 556878 Query 112205 GGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCG-GGCGACTGCGACGGTGC 112263 ||| || || ||||| ||| |||||||||| || | || ||| | ||| | | Sbjct 556877 GGAATTCGAGGCCCTGTACGAGAAGTACGAGGCTGAGGGCCGTGGCCGC-AAGACCAT-C 556820 Query 112264 CAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAT 112322 || | || | | ||| | || || || || |||| ||||||||||||| || | Sbjct 556819 AAGGCTCAGAAGCTTTGGTACGCCATCCTTGAGGCTCAGACCGAGACTGGTAACCCCTTC 556760 Query 112323 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 112382 ||||| ||||| ||| ||| |||| ||||| || || ||||| |||||| ||| Sbjct 556759 ATGCTCTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACTTGGGTACCATCCGC 556700 Query 112383 AGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 112442 || ||||||||||| || || || | || | | | |||||| ||||| || Sbjct 556699 AGCTCCAACCTCTGCACTGAGATTATCGAGTACTGTGCCCCTGATGAGGTCGCTGTCTGC 556640 Query 112443 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA--TTTGATT 112500 ||||| || || | ||||| || | || || | | | || | | || | ||| | Sbjct 556639 AACCTTGCTTCCCTTGCTCTTCCTGCTTTCGTTGA-CTACA-ACGAGGGCAAGTATGACT 556582 Query 112501 ATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATA 112560 | || ||||| ||||| || | ||| ||| | |||| | ||||| Sbjct 556581 TCAAGAAGCTCCATGAAGTCACCCAGGTTGTTGTCCGCAACTTGAACAAGATCATTGACG 556522 Query 112561 GAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTC 112620 || ||||||||| || |||||||| || ||| | |||||||| |||||| Sbjct 556521 TCAACCACTACCCCGTTCAGGAGGCTCGTAACAGCAACATGCGTCACCGTCCCATTGGTG 556462 Query 112621 TCGGTGTCCAAGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTTGATTCCG 112677 ||||||| || ||||| || || | ||| | ||| ||| || | || || ||| Sbjct 556461 TCGGTGTTCAGGGTCTTGCTGACGCCTTCCTCGCTCTACGTCTCC---CCTTCGAGTCCC 556405 Query 112678 ACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGG 112737 || || || | || || || || ||||| || || ||||| || | | Sbjct 556404 CTGAGGCTCGTGAGCTGAACAAGCAGATTTTCGAGACCATCTACCACGCTGCCGTCACTG 556345 Query 112738 CGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTT 112797 | | | ||||||| ||| || ||||| || || || |||| ||||| || | Sbjct 556344 CCTCTGTGCAGTTGGCCAAGGAAGAGGGTCCCTACTCTACTTTCAAGGGCTCTCCCGCCT 556285 Query 112798 CACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGACTGG 112856 | | || | || ||||| || |||| |||| || | || ||| | || || ||| Sbjct 556284 CTGAGGGTATCCTCCAATTCGACATGT-GGAATGTCAAGCCCAGCGACCTCTGGGAGTGG 556226 Query 112857 GACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCA 112916 || |||||||| | |||||||| | ||| | || ||| | | ||| | || || Sbjct 556225 GATAGCCTCAAGGAGCAGGTCAAGGAGCACGGTATCCGCAACTCTTTGTTGCTTGCTCCC 556166 Query 112917 ATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACG 112976 ||||| || || || ||| | || || | || || ||||| ||||| || |||||||| Sbjct 556165 ATGCCTACTGCATCTACCTCGCAGATTCTTGGCAACAATGAGTGCTTCGAGCCCTACACT 556106 Query 112977 ACGAACATCTA 112987 | ||||| || Sbjct 556105 TCCAACATTTA 556095 Score = 168 bits (186), Expect = 8e-37 Identities = 185/245 (76%), Gaps = 6/245 (2%) Strand=Plus/Plus Query 102090 CTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 102149 ||||| | ||||| | || |||| ||||| | ||||| || || ||||| ||||| Sbjct 3939323 CTCTTCAACGCCATTGAGACCATTCCCTGTATCCGCAAGAAGGCCGACTGGGCCCTGAAG 3939382 Query 102150 TGGTT---TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTT 102206 ||| | ||| | || || | |||||||| |||| ||| | || ||||| || Sbjct 3939383 TGGATCTCTGACAAGAACTC---TACCTTTGCTCAGCGTCTCGTTGCCTTTGCTGCCGTC 3939439 Query 102207 GAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTC 102266 ||||||||||||||||||||| |||| | | || | |||||||||||||| |||||| Sbjct 3939440 GAGGGTATCTTCTTCTCTGGTGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTC 3939499 Query 102267 ATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAG 102326 ||||| ||||| ||||||||||||||| ||||||||||||||||| || ||| || Sbjct 3939500 ATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACCGAC 3939559 Query 102327 TTTGC 102331 ||||| Sbjct 3939560 TTTGC 3939564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742198258720