Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1 250 3e-61 >seq1 Length=8525130 Score = 250 bits (276), Expect = 3e-61 Identities = 1027/1601 (64%), Gaps = 55/1601 (3%) Strand=Plus/Plus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559 ||||| ||||||||||| |||||||| |||||| || || | ||| | || | Sbjct 555842 GTTCAAGGACTGAGACTGGTCGATGAAGGCACCACGGTCGGCAGACATCTGGACAACCTG 555901 Query 109560 CTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCAC 109619 ||| ||| ||||| ||||||||||| | |||||| || | || |||| Sbjct 555902 GCGCTGGGAAATCTCCCAAACAGTCTTGTAAAGGGCCTTGATGTCGGCAGGGATGTTGGG 555961 Query 109620 GATGTTTTGAATAGAGCCACCAGCCTTCACCA-TGAGA---TCCTTCATCTCTTTCGACC 109675 |||||| |||||||| || | ||| || ||| | | |||||| | | |||| Sbjct 555962 GATGTTCTGAATAGATCC----GTTCTCAGCAATGATACGGTTCTTCATGGCATCAGACC 556017 Query 109676 AGAGACCGACCTTTTTGAGATCGT----CAACAAGATGCTTGTTGACCACGACAAATTCA 109731 | | || | | ||||| | |||| || | || || || || ||| Sbjct 556018 ACAAGCCCATGTCGACAAGATCCTTGAGCAACCAGGGG----TTAACAACCTGGAACTCA 556073 Query 109732 CCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTG 109791 ||||| | || || |||| ||||| | |||||||| ||||| |||||||||||| Sbjct 556074 CCAGCCAAGACACGGCGCTGGTAAATGTTGGAAGTGTAGGGCTCGAAGCACTCATTGTTG 556133 Query 109792 CCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGA 109851 || || || || | || || || || ||||||||||| | | | | ||| |||| | Sbjct 556134 CCAAGAATCTGCGAGGTAGATGCAGTAGGCATGGGAGCAAGCAACAAAGAGTTGCGGATA 556193 Query 109852 CCCTTCGTCTTTACCCGCTCACGCATTGCG----TCCCAATCATAACGACCACTAAATTT 109907 || | | ||| ||| |||| ||| | ||||| || | | | || Sbjct 556194 CCGTGCTCCTTGACCTGCTCC----TTGAGGCTATCCCACTCCCAGAGGTCGCTG----- 556244 Query 109908 AGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAA 109967 | || ||| |||||| || ||| || | |||||||| || ||||| |||||||| Sbjct 556245 -GGCTTGACATTCCACATGTCGAATTGGAGGATACCCTCAGAGGCGGGAGAGCCCTTGAA 556303 Query 109968 ACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATA 110027 | | ||| | ||||| ||| |||||||| || || | || || || || Sbjct 556304 AGTAGAGTAGGGACCCTCTTCCTTGGCCAACTGCACAGAGGCAGTGACGGCAGCGTGGTA 556363 Query 110028 CATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACC 110087 || ||||| ||||| || |||| |||| ||| | |||||||| |||| Sbjct 556364 GATGGTCTCGAAAATCTGCTTGTTCAGCTCACGAGCCTCAGGGGACTCGAAGGGGAGACG 556423 Query 110088 ACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCAT 110147 | | || | || || |||||||||||||||| ||||||||| || || ||| Sbjct 556424 TAGAGCGAGGAAGGCGTCAGCAAGACCCTGAACACCGACACCAATGGGACGGTGACGCAT 556483 Query 110148 GTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATT 110207 ||| | ||||| | |||||||| |||| ||| |||| | || | || Sbjct 556484 GTTGCTGTTACGAGCCTCCTGAACGGGGTAGTGGTTGACGTCAATGATCTTGTTCAAGTT 556543 Query 110208 CTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTT 110267 ||| || |||| ||||||||| || | | | || || || ||| || Sbjct 556544 GCGGACAACAACCTGGGTGACTTCATGGAGCTTCTTGAAGTCATAC---TTGCCCTCGTT 556600 Query 110268 ATTGACAT---ATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTT 110324 | | || | || ||||||| || ||||| ||||| |||| ||| || Sbjct 556601 GTAGTCAACGAAAGCAGGAAGAGCAAGGGAAGCAAGGTTGCAGACAGCGACCTCATCAGG 556660 Query 110325 GTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTT 110384 | | ||| || | ||| || || || | |||||| || ||| |||||||||||| Sbjct 556661 GGCACAGTACTCGATAATCTCAGTGCAGAGGTTGGAGCTGCGGATGGTACCCAAGTTCTT 556720 Query 110385 CTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGT 110444 ||| || ||| |||||| ||||| ||||||||| | ||| ||||||| || || Sbjct 556721 CTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGT 556780 Query 110445 CTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAG--TTGCGTTAGCGA- 110500 ||| | || || ||||| | ||| | | || | || || | ||||| || | Sbjct 556781 CTGAGCCTCAAGGATGGCGTACCAAAGCTTCTG-AGCCTTGATGGTCTTGCG---GCCAC 556836 Query 110501 GACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAA 110560 | || || |||||||||| ||||| | |||| ||||||| ||||| ||| | || Sbjct 556837 GGCCCTCAGCCTCGTACTTCTCGTACAGGGCCTCGAATTCCTCACCGTAGCAATCGGCAA 556896 Query 110561 GACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCA 110620 | || || || ||| || | ||||| ||| | ||| || |||||| | ||||| Sbjct 556897 GGCCAGGGCACTCGTTGGGGCACATGAGGGTCCACTCTCCGTTCTTCTCAACACGCTTCA 556956 Query 110621 TGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCAC 110680 |||| || || |||||||| | || ||| || |||||| ||| | ||||| | || Sbjct 556957 TGAAAAGATCGGGAATCCAGAGAGCAAGGAAGAGATCACGGGCACGGACTTCTTCCTTAC 557016 Query 110681 CTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGA 110740 | || || ||| || || | || || | || ||| | |||||| || || || |||| Sbjct 557017 CATGATTCTTGCGAAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGA 557076 Query 110741 CAGCGATGGATCCCTTACG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGA 110797 |||| || || ||| ||| | |||| || ||||| || ||| |||| Sbjct 557077 TGGCGAAGGCACCGGGACGCTTGTTACCACCTTGGTCGACGTAGCGGGCGGTGTTGTTGA 557136 Query 110798 AGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACT 110857 |||| | | ||| || || | || | ||| ||| || ||||| || || Sbjct 557137 AGACACGCAACATGGGGATGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGC 557196 Query 110858 TATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTG 110917 ||||||| ||| |||| | | |||||| ||||| ||| ||| || | Sbjct 557197 CTGTGGCACGGATGCGGTGGGCGTTGAGACCAATGCCACCAGCCATCTTGGAGATCATGG 557256 Query 110918 CACA-CTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGA 110976 |||| ||| |||| ||| | |||||||| ||||| ||| |||| || ||| | Sbjct 557257 CACAGGTCT-TGAGGGTATCGTAAATACCCTCAATGCTATCCTCCTTCATGTCAACCAAG 557315 Query 110977 AAGCAAGAAGACATCTGAGGAC-GAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATG 111035 ||||| ||||| | ||| | || | || || || || |||||||| ||||| | ||||| Sbjct 557316 AAGCAGGAAGAAAGCTG-GCACTGGGGTGTACCGGCGTTGAAGAGGGTAGGGGAGGCATG 557374 Query 111036 AATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCGAG 111074 ||| ||| |||| ||||| |||||| || ||||| Sbjct 557375 GGTGA--AGAACTTGTTAGACATGAGGTTGTAGGTCTCGAG 557413 Score = 109 bits (120), Expect = 6e-19 Identities = 149/205 (73%), Gaps = 5/205 (2%) Strand=Plus/Minus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| || ||||| || || || |||||||||||||| || |||| || || Sbjct 3939565 GGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACC 3939506 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 |||||||| || | ||||| ||||| ||||||| ||| ||||| |||||||| Sbjct 3939505 GGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCAGAGAAGAAGAT 3939446 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GA 119670 ||||| || || || || | ||||||| ||| |||||| ||| |||||| || Sbjct 3939445 ACCCTCGACGGCAGCAAAGGCAACGAGACGCTGAGC-AAAGGTAGAGTTCTTGTCAGAGA 3939387 Query 119671 ACCACTTGAGAGCCCAGTTGGCCTT 119695 |||||| || ||||||| |||||| Sbjct 3939386 TCCACTTCAGGGCCCAGTCGGCCTT 3939362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975808582800