Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1 190 2e-43 >seq1 Length=8525130 Score = 190 bits (210), Expect = 2e-43 Identities = 651/999 (65%), Gaps = 22/999 (2%) Strand=Plus/Plus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 || ||||| | |||||||| || ||||| ||||| || || | || || | ||| || Sbjct 556095 TAAATGTTGGAAGTGTAGGGCTCGAAGCACTCATTGTTGCCAAGAATCTGCGAGGTAGAT 556154 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 || || ||||| || || | ||| | | ||| || | ||| | ||||||| | ||| Sbjct 556155 GCAGTAGGCATGGGAGCAAGCAACAAAGAGTTGCGGATACCGTGCTCCTTGACCTGCTCC 556214 Query 106055 TTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATATCAAATTGAAG 106113 ||||| |||||| || || | ||| || || || |||| |||| || ||||| || Sbjct 556215 TTGAGGCTATCCCACTCCCAGAGGTCGCTGGGCTTGACATTCC-ACATGTCGAATTGGAG 556273 Query 106114 CACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAA 106173 | || | || | |||||| |||| || || |||| ||| | | | ||||| Sbjct 556274 GATACCCTCAGAGGCGGGAGAGCCCTTGAAAGTAGAGTAGGGACCCTCTTCCTTGGCCAA 556333 Query 106174 TT-CACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCT 106232 | ||||| || | || ||||| || ||||| || || || | |||| || Sbjct 556334 CTGCACAGAG-GCAGTGACGGCAGCGTGGTAGATGGTCTCGAAAATCTGCTTGTTCAGCT 556392 Query 106233 CCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCT 106291 | || ||| || || || | | || | | | | || | || || ||||| Sbjct 556393 CACGAGCCTCAGGGGACTCGAAGGGG-AGACGTAGAGCGAGGAAGGCGTCAGCAAGACCC 556451 Query 106292 TGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGA 106351 |||||||| | |||||| || | ||| ||||| || || || || || |||||| Sbjct 556452 TGAACACCGACACCAATGGGACGGTGACGCATGTTGCTGTTACGAGCCTCCTGAACGGGG 556511 Query 106352 TAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGA 106411 || || |||||||| ||| | || | ||||| || |||| |||||| Sbjct 556512 TAGTGGTTGACGTCAATGATCTTGTTCAAGTTGCGGACAACAACCTGGGTGACTTCATGG 556571 Query 106412 AGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACAT---ACTTTGGAAGGGCGATT 106468 || || | | ||| | ||| ||| | | | || | ||||| || | Sbjct 556572 AGCTTCTTGAAGTCATACTTGCC---CTCGTTGTAGTCAACGAAAGCAGGAAGAGCAAGG 556628 Query 106469 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAC 106528 || || | ||||| ||||| |||||| | |||||| | ||| || || || Sbjct 556629 GAAGCAAGGTTGCAGACAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCAG 556688 Query 106529 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCC 106588 | |||||| || || || ||||| ||||| ||||| ||||| |||||| ||| Sbjct 556689 AGGTTGGAGCTGCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCC 556748 Query 106589 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-C 106647 |||||||||||| |||| | || ||||| ||||| | || || || || | ||| | | Sbjct 556749 TTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGGATGGCGTACCAAAGC 556808 Query 106648 ATCGGCGGCTGGTACAATGGCGTTG--GCC-CGTCCCTCCGCCTCGTACTTTGTGTAGAG 106704 || | | || | |||| ||| ||| || ||||| ||||||||||| ||| || Sbjct 556809 TTCTGAGCCTTG----ATGGTCTTGCGGCCACGGCCCTCAGCCTCGTACTTCTCGTACAG 556864 Query 106705 GGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAG 106764 ||| || || |||||||| |||| || || || || || || || | || Sbjct 556865 GGCCTCGAATTCCTCACCGTAGCAATCGGCAAGGCCAGGGCACTCGTTGGGGCACATGAG 556924 Query 106765 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGA 106824 | ||| | || || |||||| |||||||||||||| || |||||||| || | Sbjct 556925 GGTCCACTCTCCGTTCTTCTCAACACGCTTCATGAAAAGATCGGGAATCCAGAGAGCAAG 556984 Query 106825 AAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACT 106883 |||||||| | ||| || | ||||| | ||| || || || | |||||||||| Sbjct 556985 GAAGAGATCACGGGCACGGA-CTTCTTCCTTACCATGATTCTTGCGAAGGTCAAGGAACT 557043 Query 106884 CCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA 106922 | | || ||| |||||||| |||||||| |||| |||| Sbjct 557044 CAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCGA 557082 Score = 96.9 bits (106), Expect = 4e-15 Identities = 148/210 (70%), Gaps = 6/210 (3%) Strand=Plus/Minus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || ||| |||||||| || || || || || || || |||||| || || Sbjct 3939565 GGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACC 3939506 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 ||||||||||| |||||||| | ||| | || | | || | || ||||||||||| Sbjct 3939505 GGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCAGAGAAGAAGAT 3939446 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA-- 117450 |||||| || ||||| |||| || |||| || |||| ||| || ||||| Sbjct 3939445 ACCCTCGACGGCAGCAAAGGCAACGAGACGCTGAGCAAAGG---TAGAGTTCTTGTCAGA 3939389 Query 117451 -AACCATTTCATTGCCCATTTCGCCTTCTT 117479 | ||| |||| ||||| | |||||||| Sbjct 3939388 GATCCACTTCAGGGCCCAGTCGGCCTTCTT 3939359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980608256240