Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq7 152 1e-31
seq3 134 3e-26
seq1 116 8e-21
>seq7
Length=1200748
Score = 152 bits (168), Expect = 1e-31
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|||||||| ||||||||||| || || || ||||| |||| || || | ||||| |||
Sbjct 1041547 ACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCG 1041488
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || || || ||||| || || || || || || || ||
Sbjct 1041487 AGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTATCCTGG 1041428
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || |||||| || ||||||||||| ||| ||||| |||||||| | |||||||
Sbjct 1041427 ATCTTGGACTTGACATTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTT 1041368
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || || ||||| | |||||
Sbjct 1041367 CCCGTAAGGGTCTTGACGAAAATCTGCAT 1041339
>seq3
Length=4610873
Score = 134 bits (148), Expect = 3e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || |||||| ||| || ||||| ||||| || | ||||| | ||||||||
Sbjct 3673210 ACGAGATGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCA 3673269
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||||||||| || |||||||| ||||| ||||| |||||||| || || || || |||
Sbjct 3673270 AGCTGCTTACCAGCAAAGATAAGACGTTGCTGGTCAGGAGGAATACCCTCCTTATCCTGA 3673329
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| || ||||| || ||| || || || | || | ||||||
Sbjct 3673330 ATCTTCGACTTGACGTTGTCGATGGTATCAGAAGACTCAACCTCCAATGTGATCGTCTTG 3673389
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || || ||||| | |||||
Sbjct 3673390 CCGGTGAGGGTCTTGACGAAAATCTGCAT 3673418
Score = 131 bits (144), Expect = 4e-25
Identities = 140/185 (76%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || ||| ||| || ||||| |||||||| | || || | ||||| |||
Sbjct 3673894 ACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCATCCTCG 3673953
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || ||||| || || || || ||||| || ||||| || || ||||| |||
Sbjct 3673954 AGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCAGGGGGAATTCCCTCCTTGTCCTGA 3674013
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| ||||||||||| ||| || || || ||||||| |||||
Sbjct 3674014 ATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCAACCTCGAGGGTAATGGTCTTG 3674073
Query 195112 CCTGT 195116
|| ||
Sbjct 3674074 CCGGT 3674078
Score = 129 bits (142), Expect = 1e-24
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| ||||| ||||| || ||||| ||||| ||| ||||| | || || ||||||||
Sbjct 3673443 GTGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCGTCCTCGAGCTG 3673502
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|||||| || |||||||| || || || || ||||| || || || || ||||| || ||
Sbjct 3673503 CTTACCGGCAAAGATAAGACGCTGCTGATCAGGAGGGATACCCTCCTTATCTTGGATCTT 3673562
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
| |||||| || || || |||||||| || ||||| | |||| ||||| || ||
Sbjct 3673563 TGACTTGACATTGTCGATTGTGTCCGATGACTCAACTTCTAATGTAATAGTCTTGCCAGT 3673622
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| ||| || || || | ||||||
Sbjct 3673623 AAGAGTCTTGACAAAGATTTGCAT 3673646
>seq1
Length=8525130
Score = 116 bits (128), Expect = 8e-21
Identities = 133/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
|| || || ||||| |||| || || | ||||| ||||||||||| || ||||||||
Sbjct 1348136 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 1348077
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || ||||| || |||||||| || || || || || || |||||| || ||
Sbjct 1348076 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCG 1348017
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
||||||||||| || || || ||||||| ||||| || |||| || || |||||
Sbjct 1348016 ATGGTGTCCGAGGACTCGACCTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTCACGAA 1347958
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481230403942
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |