Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1 379 4e-100 >seq1 Length=8525130 Score = 379 bits (420), Expect = 4e-100 Identities = 1235/1883 (66%), Gaps = 90/1883 (5%) Strand=Plus/Plus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | ||| | |||||||||| ||| || || ||||||||||||||||| Sbjct 555714 ACGGTGAACTGAATGGGAGCGGCAGCAGCCTGGGTACGGAGGTAGTACATGCCGGTCTTG 555773 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668 || || ||| ||| ||| | |||||| |||| ||| |||| | || Sbjct 555774 AGACCGAGCTT---CCAACCGGCGAAGTGCAT-GCTGGTGA---TCTTGCCC-----ATG 555821 Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728 ||| | | | || || | ||||| ||||||| |||||| ||||| | | Sbjct 555822 GTGGGCTCACGCATG-------TGGATGTTCAAGGACTGAGACTGGTCGATGAAGGCACC 555874 Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788 | ||| || | ||| | | | | | |||||| | |||||| || |||||| | | Sbjct 555875 ACGGTCGGCAGACATCTGGACAACCTGGCGCTGGGAAATCTCCCAAACAGTCTTGTAAAG 555934 Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGT 212845 | |||| ||| | |||| | |||||||||||| | ||| || | | ||| | Sbjct 555935 GGCCTTGATGTCGGCAGGGATGTTGGGGATGTTCTGAATAGATCCGTTCTCAGCAATGAT 555994 Query 212846 CAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTG 212905 | | | |||| | || ||| | |||| || | || ||||| || Sbjct 555995 ACGGTTCTT---CATGGCATCAGACCACAAGCCCATGTCGACAAGATCCTTGAGCAACCA 556051 Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965 ||||| || | |||||| ||||| | | || | | |||||||| ||| |||||||| Sbjct 556052 GGGGTTAACAACCTGGAACTCACCAGCCAAGACACGGCGCTGGTAAATGTTGGAAGTGTA 556111 Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025 |||||||| || ||| ||||| || |||||||| | || || || ||||||||||| Sbjct 556112 GGGCTCGAAGCACTCATTGTTGCCAAGAATCTGCGAGGTAGATGCAGTAGGCATGGGAGC 556171 Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCC--GAAGCTCTGCCCAG 213083 | || | | ||| | | |||||||| || | | || || ||| | Sbjct 556172 AAGCAACAAAGAGTTGCGGATACCGTGCTCCTTGACCTG-CTCCTTGAGGCTAT------ 556224 Query 213084 TCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCT 213143 |||| || ||||| |||| | ||| || ||||||||||| || || | ||| || Sbjct 556225 -CCCA-CTCCCAGA--GGTCGCTGGGCTTGACATTCCACATGTCGAATTGGAGGATACC- 556279 Query 213144 TTGCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTC 213199 |||| |||| ||||| | ||| |||||||| || | |||||||||| || Sbjct 556280 ---CTCAGAGGCGGGAGAGCCCTTGAAAGTAGAGTAGGGACCCTCTTCCTTGGCCAACT- 556335 Query 213200 GCAG-GACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCT 213258 ||| || || | |||||||| ||||||||| || || |||| | |||| |||| Sbjct 556336 GCACAGAGGCAGTGACGGCAGCGTGGTAGATGGTCTCGAAAATCTGCTTGTTCAGCTCAC 556395 Query 213259 TGGCCTCTGGGGACGTGAAGGGCAT-CATCATGCGTTGGAACACATCAGCCAGCCCCTGG 213317 ||||| |||||| |||||| | | | ||| |||| | ||||| || ||||| Sbjct 556396 GAGCCTCAGGGGACTCGAAGGGGAGACGTAGAGCGA-GGAAGGCGTCAGCAAGACCCTGA 556454 Query 213318 ACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTA 213376 || |||| || ||||| | ||| | || ||| || |||| ||||| | |||||| Sbjct 556455 ACACCGACACCAATGGGACGGTGACGCATGTTGCTGTTACGAGC-CTCCTGAACGGGGTA 556513 Query 213377 AAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGAC---ATGGGC 213433 |||| ||| ||||||||||| | ||||||| | || | |||||| |||| Sbjct 556514 GTGGTTGACGTCAATGATCTTGTTCAAGTTGCGGACAACAACCTGGGTGACTTCATGG-- 556571 Query 213434 CAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAA---ACTCAGGCAGGGCGAT 213490 || | || ||| | || | |||| ||| | ||| | |||| || || | Sbjct 556572 -AGCTTCT--TGAAGTCATACTT-GCCCTCGTTGTAGTCAACGAAAGCAGGAAGAGCAAG 556627 Query 213491 GCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCA 213550 | || |||||||| || || ||||| | || | | |||||| || ||||| ||||| Sbjct 556628 GGAAGCAAGGTTGCAGACAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCA 556687 Query 213551 CAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAA-T 213609 |||||| || |||||||| |||| ||||| ||||| ||| ||| | |||| | Sbjct 556688 GAGGTTGGAGCTGCGGATGGTACCCAAGTTCTTCTGGTTGCTCTT-GCGGTTGCAGTGGT 556746 Query 213610 CCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGA 213669 |||||||||||||| ||||| || ||||| ||| | | | || || | ||| | Sbjct 556747 CCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGGATGGCGTACCAAA 556806 Query 213670 GGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGT-AGCCTCGTACTGTTCGTAG 213728 | | | ||||||| | || | || ||| | | ||||||||||| ||||| Sbjct 556807 GCTTCTGAGCCTTGATG----GTCTTGCGGCCACGGCCCTCAGCCTCGTACTTCTCGTAC 556862 Query 213729 AGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATG 213788 || | | |||||| | || || | | || || || || ||| |||||| Sbjct 556863 AGGGCCTCGAATTCCTCACCGTAGCAATCGGCAAGGCCAGGGCACTCGTTGGGGCACATG 556922 Query 213789 AGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGC 213847 ||| |||| || |||| | |||| || | || |||||| || || || | ||| || || Sbjct 556923 AGGGTCCACTCTCCGTTCTTCTCA-ACACGCTTCATGAAAAGATCGGGAATCCAGAGAGC 556981 Query 213848 GGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAA 213907 ||| || || | || | || ||| ||| || ||||| || || || || Sbjct 556982 AAGGAAGAGATCACGGGCACGGACTTCTTCCTTACCATGATTCTTGCGAAGGTCAAGGAA 557041 Query 213908 GTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG-- 213965 ||||||| || |||||||| ||||| | ||||||||| ||||| || || | |||| Sbjct 557042 CTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCGAAGGCACCGGGACGCTTGTT 557101 Query 213966 -CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCC 214024 || || ||||| || | ||| ||||||||| |||| | ||| | | || Sbjct 557102 ACCACCTTGGTCGACGTAGCGGGCGGTGTTGTTGAAGACACGCAACATGGGGATGACACC 557161 Query 214025 GTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGT--TGCTCATG 214082 |||||| |||||||| || || || || ||||| | ||| | | | || | | Sbjct 557162 GTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCTGTGGCACGGATGCGGTGGGCGTT 557221 Query 214083 GAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATG 214142 |||| || |||||||| || ||||||||||||||| ||| | | | || || Sbjct 557222 GAGA--CCAATGCCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTATCGTAA 557279 Query 214143 ATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG 214202 || || | ||||| || || | | || | |||||||||| || |||||| | | Sbjct 557280 ATACCCTCAATGCTATCCTCCTTCATGTCAACCAAGAAGCAGGAAGAAAGCTGGCACTGG 557339 Query 214203 GACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGC 214262 | | || | |||||| || || ||| ||||||| | | ||||||||||| | ||| Sbjct 557340 GGTGTACCGGCGTTGAAGAGGGTAGGGGAGGCATGGGTGAAGAACTTGTTAGACATGAGG 557399 Query 214263 CTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATC 214322 |||||||||| || || ||||| || || | |||| ||||| Sbjct 557400 TTGTAGGTCTCGAGAACACGCTCGATGTTGTCACCCCAAATACCGACAGCGACTCTCATG 557459 Query 214323 AGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCC---CTTGAGCAGGTAGGAGCGC 214379 | |||||||||||| | ||| | | || ||| | | |||||||||||| |||||| Sbjct 557460 ATCATGTGCTGGGGACGCTCGA-CGATC--TTGCCGTCAATCTTGAGCAGGTATGAGCGC 557516 Query 214380 TCCAGAGTCTTGAACCCAAAGTA 214402 || ||||||||||| || ||||| Sbjct 557517 TCAAGAGTCTTGAAGCCGAAGTA 557539 Score = 224 bits (248), Expect = 2e-53 Identities = 491/728 (67%), Gaps = 13/728 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || | ||||| |||||||| ||||| || | | ||||||||||| Sbjct 3939856 CTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTC 3939797 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCC-AGCA 47957 ||||||| ||||||||||| | || || | | | || ||| | | || | Sbjct 3939796 CATGAAGTCGAAGGGGTTGGTGGACTTGTAAATCT-TCTCGTTGCCAAGAGCGACGAGGA 3939738 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | |||| |||||| |||| ||||| | ||||||| || ||||||||| | || | Sbjct 3939737 GACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTTGGCGTTCATGCCGAGCAGAG 3939678 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAAT-- 48075 || | ||||| || || ||||||| ||| || || || || | || Sbjct 3939677 CGCAAGGAAGAGCCTCGGTAAGGAACTCCTGCTCAATGGTGACAGCGTCAGTGATGATGC 3939618 Query 48076 CTGC--TTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 | || | | | | || | |||| |||| ||||| || | || | |||| Sbjct 3939617 CGGCAATGACCTCCTTGCTGGCACGGTT-GTTG---AGGTG---GGAGTGCAGAAGGCAG 3939565 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 |||||||| |||| | || ||||| || ||||||| ||||||||||| ||||| Sbjct 3939564 GCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCG 3939505 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||||| || | || ||||||||||| || | || || | |||||||||||||| Sbjct 3939504 GGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCAGAGAAGAAGATA 3939445 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 ||||| || || || || || ||| | || | || | || ||||||||| |||||| Sbjct 3939444 CCCTCGACGGCAGCAAAGGCAACGAGACGCTGAGCAAAGGTAGAGTTCTTGTCAGAGATC 3939385 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373 || || |||||||| |||||||| ||| || || || ||||| ||||| |||| Sbjct 3939384 CACTTCAGGGCCCAGTCGGCCTTCTTGCGGATACAGGGAATGGTCTCAATGGCGTTGAAG 3939325 Query 48374 AGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433 || | ||| || | ||| || |||||| | ||| | ||| ||||| Sbjct 3939324 AGGTATGTGCGCTGGGTAGGCTCCTTGACGTAGGTATCAATAAGCAGGGAGTATGTCTCA 3939265 Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493 ||||| | ||||| || ||||||||| ||||||||| | |||| | ||| Sbjct 3939264 GAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGACCCTCGGGAATCTGG 3939205 Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553 || || ||||||| | ||| || || ||||| || || || || || || || |||||| Sbjct 3939204 ACCTCGTTGGAGAAGCGCTCGAGAAGGTTCTCGTTAACAATACCGTCAGAGGCGGCAAAG 3939145 Query 48554 AAGGCAAG 48561 |||||||| Sbjct 3939144 AAGGCAAG 3939137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532497251840