Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1 230 4e-55 >seq1 Length=8525130 Score = 230 bits (254), Expect = 4e-55 Identities = 569/857 (66%), Gaps = 18/857 (2%) Strand=Plus/Plus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| |||||||||||||||| | |||| |||||| |||||||| || ||| Sbjct 3939008 GAGATCTGGCAGATGTACAAGAAGGCCGAGGCCTCATTCTGGACAGCCGAAGAAATCGAT 3939067 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTC-TATCCA--AAGACGAGCAGCATTTTCTC 25590 || ||||||| || ||| ||| || | | || | | |||||| | | || || Sbjct 3939068 CTTTCCAAGGATCTGCACGATTGGAACAACCGTCTCAACGATGACGAGAAATACTTCATC 3939127 Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650 || | | || |||||||| |||||||| ||||| || |||||||| || |||| Sbjct 3939128 TCCCACATTCTTGCCTTCTTTGCCGCCTCTGACGGTATTGTTAACGAGAACCTTCTCGAG 3939187 Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 | ||| ||| || || ||| |||| || ||||||||||||||||| Sbjct 3939188 CGCTTCTCCAACGAGGTCCAGATTCCCGAGGGTCGCTGCTTCTACGGTTTCCAGATCATG 3939247 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCT-GATGACGTACATTACAGACGT 25769 || || || | ||||||||| || || |||| | ||| || ||| | | || Sbjct 3939248 ATGGAGAACATCCACTCTGAGACATACTCCCTGCTTATTGAT-ACCTACGTCAAGGAGCC 3939306 Query 25770 CGCCGAGAG-AGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828 || || | | || || || ||||| ||| ||| ||| | ||| | ||||| Sbjct 3939307 TACCCAGCGCACATAC-CTCTTCAACGCCATTGAGACCATTCCCTGTATCCGCAAGAAGG 3939365 Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAG 25888 | |||||| ||||||||||| | ||| | |||| |||| |||| || || | Sbjct 3939366 CCGACTGGGCCCTGAAGTGGATCTCTGACAAGAACTCTACCTTTGCTCAGCGTCTCGTTG 3939425 Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948 |||||||||| || ||||| ||||| ||| ||| | ||||| ||||||||||||||| Sbjct 3939426 CCTTTGCTGCCGTCGAGGGTATCTTCTTCTCTGGTGCCTTTGCCTCCATCTTCTGGCTCA 3939485 Query 25949 AGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGG 26008 || || || ||||||||| ||| ||| ||||||||||||||| | ||||||| Sbjct 3939486 AGAAGCGCGGTCTCATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGG 3939545 Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTC-- 26066 |||| |||| || ||||||||||| ||| ||| |||| ||| |||| | | | Sbjct 3939546 GTCTTCACACCGACTTTGCCTGCCT--TCTGCAC-TCCCAC---CTCAACAACCGTGCCA 3939599 Query 26067 TCAA-GAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNN 26125 ||| ||| | | | | ||||||| || ||||| || ||| ||||||| | Sbjct 3939600 GCAAGGAGGTCATTGCCGGCATCATCACTGACGCTGTCACCATTGAGCAGGAGTTCCTTA 3939659 Query 26126 NNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTG 26185 | ||||||||| || ||||||| || ||||||| Sbjct 3939660 CCGAGGCTCTTCCTTGCGCTCTGCTCGGCATGAACGCCAACCTCATGAAGCAGTACATTG 3939719 Query 26186 AGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTAC-AGTACGCCT 26244 ||| || || || | ||| || | || || || | | ||| ||| | || Sbjct 3939720 AGTTCGTCGCTGATCGTCTCCTCGTCGCTCTTGGCAACGAGAAGATTTACAAGTCCACC- 3939778 Query 26245 AACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAG 26304 ||||| |||||||| ||||| ||||| || | | || |||||||||||||| || ||| Sbjct 3939779 AACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTCGAGAAG 3939838 Query 26305 AGGGTCGGCGACTATCA 26321 | || ||||| || || Sbjct 3939839 CGTGTTGGCGAGTACCA 3939855 Score = 199 bits (220), Expect = 7e-46 Identities = 959/1494 (64%), Gaps = 62/1494 (4%) Strand=Plus/Plus Query 221422 GGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGGAGAAG 221480 ||||||||||||||||||||| || ||| |||||| || ||| | ||||| || || Sbjct 556352 GGCAGCGTGGTAGATGGTCTCGAAAATCTGCTTGTTCAG-CTCACGAGCCTCAGGGGACT 556410 Query 221481 TGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGG 221540 |||||| | ||| || | ||| |||| || || ||||| || |||| ||| |||| Sbjct 556411 CGAAGGGGAGACGTAGAGCGAGGAAGGCGTCAGCAAGACCCTGAACACCGACACCAATGG 556470 Query 221541 GCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGAT 221598 | | ||| | | ||||| | || | || ||| ||||| || ||||||||| || Sbjct 556471 GACGGTGACGCATGTTGCTGTTACGAGC-CTCCTGA-ACGGGGTAGTGGTTGACGTCAAT 556528 Query 221599 CAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTC-TGGTGATT-- 221655 | ||||| | ||| | ||| ||| |||| ||| | |||| ||| | || Sbjct 556529 GATCTTGTTCAAGTTGCG------GAC---AACAACCTGGGTGA-CTTCATGGAGCTTCT 556578 Query 221656 -GAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGG 221714 ||| | ||| ||| ||| || | || || ||||| || |||| | | Sbjct 556579 TGAAGTCATACTTGCCCTCGTTGTAG------TCAACGAAAGCAGGAAGAGCAAGGGAAG 556632 Query 221715 CCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGT 221774 | ||||| || || || ||||| || | |||| || ||||| || ||||||| Sbjct 556633 CAAGGTTGCAGACAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCAGAGGT 556692 Query 221775 TGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG-TCCTTG 221833 || || |||||| |||| || || || || |||||| ||| ||| | |||||| Sbjct 556693 TGGAGCTGCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTGCGGTTG-CAGTGGTCCTTG 556751 Query 221834 TAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCT 221893 |||||||| ||||| |||||||| ||||||| | || || || ||| || | | Sbjct 556752 TAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGGATGGCGTACCAAAGCT-T 556810 Query 221894 CTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCAT 221952 ||| || | | ||| | | | ||||| | || | | | || || || || | Sbjct 556811 CTGAGCCTTGATGGTCTTGCGGCCACGGCCCTCAGCCTCGTACTTCTCG-TACAGGGCCT 556869 Query 221953 GTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACT 222012 | || | |||||||| ||| | ||||| || ||| | ||| ||||| || | Sbjct 556870 --CGAATTCCTCACCGTAGCAATCGGCAAGGCCAGGGCACTCGTTGGGGCACATGAGGGT 556927 Query 222013 CCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAA 222072 ||| | ||| | | || | || |||||| || || || ||||| || || | || Sbjct 556928 CCACTCTCCGTTCTTCTCAACACGCTTCATGAAAAGATCGGGAATCCAGAGAGCAAGGAA 556987 Query 222073 GAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAA 222132 |||||| | || || || ||| || | || || | || || | |||||||| Sbjct 556988 GAGATCACGGGCACGGACTTCTTCCTTACCATGATTCTTGCGAAGGTCAAGGAACTCAAA 557047 Query 222133 AATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACC 222192 | || |||||||| ||||| || |||| ||| | || ||||| |||||||| ||||| Sbjct 557048 GACATCTGCGTGCCAGGGCTCAAGGTAGATGGCGAAGGCACCGGGACGCTTGTTACCACC 557107 Query 222193 CTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGA 222252 || || || | | |||||||| || | | || | | |||||||| Sbjct 557108 TTGGTCGACGTAGCGGGCGGTGTTGTTGAAGACACGCAACATGGGGATGACACCGTTGGA 557167 Query 222253 TCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATGCC 222312 ||||||||| || ||||| | || ||| | | | ||| | || Sbjct 557168 GGTACCGTTGGTACCAGCGATGTAAGAGCCTGTGGCACGGATGCGGTGGGCGTTGAGACC 557227 Query 222313 GATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTC 222372 || ||||| || || ||||||||||| ||| ||||||| || || || ||||| Sbjct 557228 AATGCCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTATCGTAAATACCCTC 557287 Query 222373 CATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACA 222432 || |||||||| | || | || || || || || | ||| | | || | || Sbjct 557288 AATGCTATCCTCCTTCATGTCAACCAAGAAGCAGGAAGAAAGCTGGCACTGGGGTGTACC 557347 Query 222433 GGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGT 222492 |||||| || || || || ||| || || ||| | ||||||| || | ||| || Sbjct 557348 GGCGTTGAAGAGGGTAGGGGAGGCATGGGTGAAGAACTTGTTAGACATGAGGTTGTAGGT 557407 Query 222493 CTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTA 222552 ||| | || | |||||||||| || ||| | ||| ||||||| ||||| Sbjct 557408 CTCGAGAACACGCTCGATGTTGTCACCCCAAATACCGACAGCGACTCTCATGATCATGTG 557467 Query 222553 CTGGGGCCTCTCCACAGGACCCTTGGAG---CTGGAGAGCAGGTACGATTTTTCCAGAGT 222609 |||||| | ||| || || |||| | | ||||||||| || || ||||| Sbjct 557468 CTGGGGACGCTCGAC--GA-TCTTGCCGTCAATCTTGAGCAGGTATGAGCGCTCAAGAGT 557524 Query 222610 CTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGCTC 222669 |||||| || ||||| | | || ||||| | | ||| || | ||| | ||| ||||| Sbjct 557525 CTTGAAGCCGAAGTACTGGTAGTTGAAGTCACGGTCGTAGACAATGGCAGAGTCAAGCTC 557584 Query 222670 CGACTTGTGCT---TTACGCTCAACTCGAAAAAGCGCTCAGACACGAGGGGAG-CGTTCT 222725 | ||||||| | |||| ||||| | || || | | ||| | | ||| Sbjct 557585 CTCTTTGTGCTTCATAACGC---ACTCGTATGTCTCCTTGGAGATCATGGGCGAGGCTCT 557641 Query 222726 CTTTGGTGTCGGGGTTAACGTTGTGGTACAGCTGCCACATGGCATCAG-AGA--ACGTGT 222782 | ||| | | |||||| || | |||||| || | ||| || || ||| ||| || | Sbjct 557642 C-TTGTTCTTGGGGTTGACATAGTGGTAGAG--GTCAC-TGACAACAGTAGACCACTGCT 557697 Query 222783 CGGGAGTCTGCTTGTGCAGATTCGACACGGCGATCCGAGACGCCAAGATACCATAGTCAG 222842 |||||||||||| || || || || || || | | || | ||| | ||||||| Sbjct 557698 TCTTAGTCTGCTTGTGAAGGTTGGAAACAGCAATTCTGGCAGCGAGGATGGCGTAGTCAG 557757 Query 222843 GGTGCACGGTG---GTCATGCTGGCTAGGGTCT---GAGCCAGGAGCACGTCGA 222890 |||| |||| |||||| ||| ||||| |||| |||||| | ||| Sbjct 557758 GGTG---GGTGACCGTCATGTAGGCAGCGGTCTCGGCAGCCTGGAGCAAGACGA 557808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844498125440