Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1 158 1e-33 >seq1 Length=8525130 Score = 158 bits (174), Expect = 1e-33 Identities = 887/1396 (64%), Gaps = 33/1396 (2%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||| | ||||| |||| || || || |||| || ||| Sbjct 557473 CCCCAGCACATGATCATGAGAGTCGCTGTCGGTATTTGGGGTGACAACATCGAGCGTGTT 557414 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || ||||| | | || | |||| || || | || |||||||| Sbjct 557413 CTCGAGACCTACAACCTCATGTCTAACAAGT-TCTTCACCCATGCCTCCCCTACCCTCTT 557355 Query 75331 CAATGCTGGTACACCA-AGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 ||| || |||||||| || | ||| | || |||||| | | | || ||||||| Sbjct 557354 CAACGCCGGTACACCCCAGTGC-CAGCTTTCTTCCTGCTTCTTGGTTGACATGAAGGAGG 557296 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 | || | ||||| || | || || | | ||||| ||||| ||| ||||| Sbjct 557295 ATAGCATTGAGGGTATTTACGATACCCTCAAGACCTGTGCCATGATCTCCAAGATGGCTG 557236 Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-AC 75507 | || ||||| | || ||| | | |||| | ||| || ||| || || Sbjct 557235 GTGGCATTGGTCTCAACGCCCACCGCATCCGTGCCAC--AGGCTCTTACATCGCTGGTAC 557178 Query 75508 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 75567 || ||| || | ||| | || || ||| | || || || ||| ||| || ||||| Sbjct 557177 CAACGGTACCTCCAACGGTGTCATCCCCATGTTGCGTGTCTTCAACAACACCGCCCGCTA 557118 Query 75568 TGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATG 75621 || | |||| || ||||| | || || |||| ||||| | || || || Sbjct 557117 CGTCGACCAAGGTGGTAACAAGCGTCCC---GGTGCCTTCGCCATCTACCTTGAGCCCTG 557061 Query 75622 GCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCG 75681 ||| || ||| || | ||||||||||| | || || || ||| | ||||| | || Sbjct 557060 GCACGCAGATGTCTTTGAGTTCCTTGACCTTCGCAAGAATCATGGTAAGGAAGAAG-TCC 557002 Query 75682 GTGTA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGG 75740 ||| | |||||||| | || |||||||| || |||||||||||||| |||||| Sbjct 557001 GTGCCCGTGATCTCTTCCTTGCTCTCTGGATTCCCGATCTTTTCATGAAGCGTGTTGAGA 556942 Query 75741 AGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGG 75800 || || | ||| | || | || || || || || || || |||| | Sbjct 556941 AGAACGGAGAGTGGACCCTCATGTGCCCCAACGAGTGCCCTGGCCTTGCCGATTGCTACG 556882 Query 75801 GTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTG 75860 ||||||| || || ||||| ||| ||||| || | ||||| | | | ||| Sbjct 556881 GTGAGGAATTCGAGGCCCTGTACGAGAAGTACGAGGCTGAGGGCCGTGGCCGCAAGACCA 556822 Query 75861 TACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCA 75919 | | || | | || | ||||| | || || || | | ||||| |||||||| | || Sbjct 556821 T-CAAGGCTCAGAAGCTTTGGTACGCCATCCTTGAGGCTCAGACCGAGACTGGTAACCCC 556763 Query 75920 TATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATC 75979 | ||||| |||||||| || ||| ||||| ||||| ||||| ||||| || ||| Sbjct 556762 TTCATGCTCTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACTTGGGTACCATC 556703 Query 75980 AAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTT 76039 ||||| || || ||||| || ||| | |||||| | |||||| ||||| Sbjct 556702 CGCAGCTCCAACCTCTGCACTGAGATTATCGAGTACTGTGCCCCTGATGAGGTCGCTGTC 556643 Query 76040 TGCAATTTGGCATCAATCGCCCTTCCAAAGT---ATGTCAATGAAGAGACTCGCACTTTT 76096 ||||| | || || | || ||||| | || | | | ||| ||| | | Sbjct 556642 TGCAACCTTGCTTCCCTTGCTCTTCCTGCTTTCGTTGACTACAACGAG---GGCAAGTAT 556586 Query 76097 GATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATT 76156 || | | || || |||||| |||| || ||||| | || | ||| ||||| Sbjct 556585 GACTTCAAGAAGCTCCATGAAGTCACCCAGGTTGTTGTCCGCAACTTGAACAAGATCATT 556526 Query 76157 GACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATT 76216 ||| || || |||||| || || || || || ||||| ||| | || ||| Sbjct 556525 GACGTCAACCACTACCCCGTTCAGGAGGCTCGTAACAGCAACATGCGTCACCGTCCCATT 556466 Query 76217 GGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT-TTTGTGCCGCTACGCATTTGATTC 76275 ||| | |||||||| ||||| || || | || | | | | || | | || || || Sbjct 556465 GGTGTCGGTGTTCAGGGTCTTGCTGACGCCTTCCTCGCTCTACGTCT-CCCCTTCGAGTC 556407 Query 76276 AGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGA 76335 ||| || ||| |||| | || || || ||||| || ||||| || | Sbjct 556406 CCCTGAGGCTCGTGAGCTGAACAAGCAGATTTTCGAGACCATCTACCACGCTGCCGTCAC 556347 Query 76336 GGCGAGTTGTG-AATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCG 76394 || |||| | ||||| | | | ||| |||| || || |||| ||||||| Sbjct 556346 TGC-CTCTGTGCAGTTGGCCAAGGAAGAGGGTCCCTACTCTACTTTCAAGGGCTCTCCCG 556288 Query 76395 CGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC-TCAACTACGAC 76453 | || | || | || || || || |||| |||| || || || ||| | || || Sbjct 556287 CCTCTGAGGGTATCCTCCAATTCGACATGT-GGAATGTCAAGCCCAGCGACCTCTGGGAG 556229 Query 76454 TGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCA 76513 |||||| |||||||| | |||||||| | ||| | || ||| | | ||| | || Sbjct 556228 TGGGATAGCCTCAAGGAGCAGGTCAAGGAGCACGGTATCCGCAACTCTTTGTTGCTTGCT 556169 Query 76514 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATAC 76573 || ||||| || || || ||| | || || | || || ||||| ||||| || || ||| Sbjct 556168 CCCATGCCTACTGCATCTACCTCGCAGATTCTTGGCAACAATGAGTGCTTCGAGCCCTAC 556109 Query 76574 ACAACAAACATCTACC 76589 || | ||||| |||| Sbjct 556108 ACTTCCAACATTTACC 556093 Score = 96.9 bits (106), Expect = 4e-15 Identities = 148/210 (70%), Gaps = 6/210 (3%) Strand=Plus/Plus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTT---TGACACAAAGTCTCGCTCCTTCGCCGAG 65079 |||||||| | ||||| |||| ||| | ||||| || ||| |||| || || Sbjct 3939359 AAGAAGGCCGACTGGGCCCTGAAGTGGATCTCTGACAAGAACTCTA---CCTTTGCTCAG 3939415 Query 65080 CGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATT 65139 || || |||| ||||| || ||||||||||||||||| || | || | | || Sbjct 3939416 CGTCTCGTTGCCTTTGCTGCCGTCGAGGGTATCTTCTTCTCTGGTGCCTTTGCCTCCATC 3939475 Query 65140 TATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCC 65199 | ||| | |||||||| ||||||||||| || || |||||| || || || || || Sbjct 3939476 TTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCT 3939535 Query 65200 CGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229 || || |||||||| ||| || |||||| Sbjct 3939536 CGTGACGAGGGTCTTCACACCGACTTTGCC 3939565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569406114880