Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq3 100 5e-16 >seq3 Length=4610873 Score = 100 bits (110), Expect = 5e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | || || |||| |||| |||| ||| || ||| || |||||| Sbjct 3673417 ATACCACCACGGAGACGCAGCACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAGTCG 3673476 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || | | || || | || || |||||||| || | | ||| ||||||||| Sbjct 3673477 CTCAGAGTGCGACCGTCCTCGAGCTGCTTACCGGCAAAGATAAGACGCTGCTGATCAGGA 3673536 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || || |||||||| || || | || | ||| || || || || |||||| Sbjct 3673537 GGGATACCCTCCTTATCTTGGATCTTTGACTTGACATTGTCGATTGTGTCCGATGACTCA 3673596 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||||| || ||||| || || || || || || ||||| |||||||| Sbjct 3673597 ACTTCTAATGTAATAGTCTTGCCAGTAAGAGTCTTGACAAAGATTTGCAT 3673646 Score = 84.2 bits (92), Expect = 4e-11 Identities = 160/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||| | | || || || ||||| | |||| || || || || Sbjct 3673639 ATTTGCATACCACCACGGAGGCGGAGAACGAGATGAAGGGTAGATTCCTTCTGGATGTTG 3673698 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 |||||||| | || | ||| || | || || ||||||||||| | | ||| || Sbjct 3673699 TAGTCGGAAAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAAATCAGGCGCTGCTGG 3673758 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 |||||||| || || || || || || || || | || | || |||||| |||||| Sbjct 3673759 TCAGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATAGTGTCGGAA 3673818 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||||| || || || || || || || || | || || || || || ||||| Sbjct 3673819 GACTCAACCTCGAGGGTAATGGTCTTTCCGGTCAAAGTCTTGACGAAGATCTGCAT 3673874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899654107612320