Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1 176 7e-38 seq2 132 8e-25 seq5 114 2e-19 >seq1 Length=8525130 Score = 176 bits (194), Expect = 7e-38 Identities = 301/437 (69%), Gaps = 0/437 (0%) Strand=Plus/Plus Query 2019003 GACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGCCCGGCACGGGCAAGACCACGAGC 2019062 || || |||||||| || || | | | ||| ||| || | || ||||||| || Sbjct 3019168 GAAGGGAACATGCCGCACGTCATCATCTCCGGCATGCCTGGTATCGGAAAGACCAGCAGT 3019227 Query 2019063 ATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTC 2019122 || |||||||| |||| || | |||| | | | |||||||| ||||| ||| Sbjct 3019228 GTCCTCTGCCTGGCCCGCGAACTGCTCGGCGACACGTACAAGGAGGCCGTTCTCGAGCTC 3019287 Query 2019123 AATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATCATCAAGCATCACGCTTCG 2019182 || || ||||||||||| | ||||||||||| | |||||| || | Sbjct 3019288 AACGCCAGTGACGAGCGCGGTATCGACGTCGTGCGCAACCGAATCAAGGGCTTTGCCCAG 3019347 Query 2019183 AAAAGAATCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGC 2019242 || | | || || || | |||||||||||| | |||| ||||| || |||||| || Sbjct 3019348 AAGAAAGTCACACTCCCTGCTGGCCGCCACAAGCTCGTCATTCTCGACGAAGCCGACAGC 3019407 Query 2019243 CTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACG 2019302 | || |||| || |||||||||||||| |||||||||| ||| |||||||||| Sbjct 3019408 ATGACCTCGGGCGCGCAGCAGGCCCTCCGCCGTACCATGGAAATCTACTCCAACACGACC 3019467 Query 2019303 CGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGC 2019362 || || || | ||||||||| ||| | | ||||||| | || ||| | ||| Sbjct 3019468 CGCTTCGCCTTTGCCTGCAACCAGTCCAACAAGATCATCGAGCCGCTGCAGTCGAGATGC 3019527 Query 2019363 GCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATT 2019422 |||||| |||||| || || |||||||| ||| ||| | ||| ||| ||||| Sbjct 3019528 GCCATCCTGCGCTACGCCAAACTGACCGACGCGCAGGTCGTCAAGCGCCTGATGCAGATT 3019587 Query 2019423 ATCGACGCCGAAAAGGT 2019439 ||||| ||||||||||| Sbjct 3019588 ATCGAGGCCGAAAAGGT 3019604 Score = 172 bits (190), Expect = 9e-37 Identities = 241/332 (73%), Gaps = 11/332 (3%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| ||| ||| | |||||| ||| || ||||||||||| |||||||| Sbjct 3939547 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATGAGACCGCGCTT 3939488 Query 794400 CTTGAGCCAAAAGATGG---CACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 794456 ||||||||| ||||||| || || || | ||||| ||||| ||||||||||| || Sbjct 3939487 CTTGAGCCAGAAGATGGAGGCAAAGGCAC---CAGAGAAGAAGATACCCTCGACGGCAGC 3939431 Query 794457 AAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGC 794516 |||| | ||||| |||| ||||| || || | | | | ||||||||||| || Sbjct 3939430 AAAGGCAACGAGACGCTGAGCAAAGGTAG--AGTTCTTGTCAGA-GATCCACTTCAGGGC 3939374 Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTG-GTCCT 794575 ||| || ||||| || | | |||| | || || |||||| ||||||| || | Sbjct 3939373 CCAGTCGGCCTTCTTGCGGATACAGGGAATGGTCTCAATGGCGTTGAAGAGGTATGTGCG 3939314 Query 794576 TCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGT 794635 || | || |||||||||||||| || || || || ||||| ||||| |||||||||| Sbjct 3939313 -CTGGGTAGGCTCCTTGACGTAGGTATCAATAAGCAGGGAGTATGTCTCAGAGTGGATGT 3939255 Query 794636 TTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 | || || ||||||||| || || |||||| Sbjct 3939254 TCTCCATCATGATCTGGAAACCGTAGAAGCAG 3939223 Score = 123 bits (136), Expect = 4e-22 Identities = 182/254 (72%), Gaps = 8/254 (3%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| |||||||| || ||| |||||| |||||||||||||| | | Sbjct 3939869 TGACACCGGCCTTCTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAA 3939810 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCC-- 794008 | ||||| |||||| | ||| ||||||| | | ||| ||||||| || Sbjct 3939809 GGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGACTTGTAAATCTTCTCGTTGCCAA 3939750 Query 794009 GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068 |||||||| || || || || |||||||| ||||||||||| ||||||| |||||| Sbjct 3939749 GAGCGACG--AGGAGACGATCAGCGACGAACTCAATGTACTGCTTCATGAGGTTGGCGTT 3939692 Query 794069 CATGCCGA--TGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACG 794126 |||||||| |||||| | || || | |||| | | ||||| | ||| || ||| Sbjct 3939691 CATGCCGAGCAGAGCGCAA--GGAAGAGCCTCGGTAAGGAACTCCTGCTCAATGGTGACA 3939634 Query 794127 GCCTCGATGATGAT 794140 || || ||||||| Sbjct 3939633 GCGTCAGTGATGAT 3939620 Score = 118 bits (130), Expect = 2e-20 Identities = 189/269 (70%), Gaps = 3/269 (1%) Strand=Plus/Minus Query 796151 CCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCGT 796210 ||||||| | |||||||| || |||||| || |||||||| || || |||| Sbjct 3939218 CCTCGGGAATCTGGACCTCGTTGGAGAAGCGCTCGAGAAGGTTCTCGTTAACAATACCGT 3939159 Query 796211 CGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAG-C 796269 | |||||| || ||||| || | ||| ||| |||| |||||| ||| |||| | Sbjct 3939158 CAGAGGCGGCAAAGAAGGCAAGAATGTGGGAGATGAAGTATTTCTCGTCATCGTTGAGAC 3939099 Query 796270 GA--GACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGG 796327 | | ||| | | | || | || |||| || ||||| ||||| || |||| Sbjct 3939098 GGTTGTTCCAATCGTGCAGATCCTTGGAAAGATCGATTTCTTCGGCTGTCCAGAATGAGG 3939039 Query 796328 CCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAAGC 796387 |||||||||| |||||||||| ||| ||| ||||| ||||||||| ||||| |||| Sbjct 3939038 CCTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTACTTGATGGGGAAGAGAACGAAGC 3938979 Query 796388 GATTGGGGTTCTCGCGTAGCAGCGGCTCG 796416 | ||||||||||| | || | |||||| Sbjct 3938978 GGTTGGGGTTCTCCTGGAGGATGGGCTCG 3938950 >seq2 Length=6006343 Score = 132 bits (146), Expect = 8e-25 Identities = 91/103 (88%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 2035653 AACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATC 2035712 ||||||||||| |||||||| ||||||||| | || ||||||||||| |||||| | ||| Sbjct 4970141 AACTACCTCGATATCAAGCCTCTCCTCGATGTTGGTTGCAAGACCGTCGCCAACATGATC 4970082 Query 2035713 AAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755 |||||||||||||| ||||| |||||||| ||||| ||||||| Sbjct 4970081 AAGGGCAAGTCGCCTGAGGAGATCCGCAAAACCTTCAACATCA 4970039 >seq5 Length=2539488 Score = 114 bits (126), Expect = 2e-19 Identities = 128/170 (75%), Gaps = 6/170 (4%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| |||| ||||| ||| | | Sbjct 1996343 TGTACTTGGTGACGGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCAAGTTCACCGGGGA 1996402 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTG---TTGCGCTTGTTAG 1485586 ||||||||| || || || ||||| ||||||| ||| ||| ||| | |||| || Sbjct 1996403 GGATCAGGCGAACAGCCGTTTGGATTTCGCGGGAAGAGATGGTGGACTTGTGGTTGTAAG 1996462 Query 1485587 TGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTG 1485636 | ||||| | ||| || ||| | | ||| |||| ||||| ||| Sbjct 1996463 AG---GCCAGCTTGGAGGCATCTGTGGCAACGCGCTCGAAGATGTCTTTG 1996509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916243634261414