Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq3 107 1e-17 seq2 86.0 5e-11 >seq3 Length=4610873 Score = 107 bits (118), Expect = 1e-17 Identities = 103/132 (78%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 131171 AAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTT 131230 ||| |||| || || || || || ||||| ||||||||| ||||||| |||||| | || Sbjct 1969328 AAAGTTGTTGTTGCAACGATCGCTTTTGGCATGGGTATTGATAAACCAGATGTTCGGTTT 1969269 Query 131231 GTTATTCATTACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCA 131290 || | ||| | || ||||||| | | ||||| ||||||||||| | |||| ||||| Sbjct 1969268 GTGGTGCATCATGGCTTACCCAAGAGTTTGGAAGGCTATTATCAAGAGACTGGTCGAGCA 1969209 Query 131291 GGTCGTGATGGA 131302 |||||||||||| Sbjct 1969208 GGTCGTGATGGA 1969197 >seq2 Length=6006343 Score = 86.0 bits (94), Expect = 5e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 || || ||||||||| || |||| || ||||||| |||||||| ||| | || || ||| Sbjct 4339145 GGCAAGGAAGGTCGTCTTCGAGGCAACCTGATGGGTAAGCGTGTGGATTTCTCCGCTCGT 4339086 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || || |||||| ||| | || | || | | |||||||||||||||| || |||| Sbjct 4339085 ACCGTCATTACTGGTGACGCCAACTTGTCTTTGCACGAAGTTGGTGTTCCTCGCAGTATT 4339026 Query 432408 GC 432409 || Sbjct 4339025 GC 4339024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740629123509876