Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq3 138 2e-27 >seq3 Length=4610873 Score = 138 bits (152), Expect = 2e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | |||||| || |||||||||||||| || ||||| || || || || Sbjct 3673418 TACCACCACGGAGACGCAGCACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGC 3673477 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | | |||||| || || || || || |||||||| || | || ||||| |||| Sbjct 3673478 TCAGAGTGCGACCGTCCTCGAGCTGCTTACCGGCAAAGATAAGACGCTGCTGATCAGGAG 3673537 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||||||||| ||||||| || ||||| || || || || | || | Sbjct 3673538 GGATACCCTCCTTATCTTGGATCTTTGACTTGACATTGTCGATTGTGTCCGATGACTCAA 3673597 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || || |||||||| || | ||||| ||||| || ||||| Sbjct 3673598 CTTCTAATGTAATAGTCTTGCCAGTAAGAGTCTTGACAAAGATTTGCAT 3673646 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | || ||| || || | |||||||| || ||||| || || || ||||| Sbjct 3673192 CCACCGCGCAGACGGAGGACGAGATGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAG 3673251 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | | || ||||| || || || ||||||||||| || | ||| || || ||||| Sbjct 3673252 AGAGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAGATAAGACGTTGCTGGTCAGGAGGA 3673311 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || |||||||| |||||||| | || || || || || |||||| || || || Sbjct 3673312 ATACCCTCCTTATCCTGAATCTTCGACTTGACGTTGTCGATGGTATCAGAAGACTCAACC 3673371 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || ||||||||||| || | ||||| || || |||||||| Sbjct 3673372 TCCAATGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 3673418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826872928814