Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 5e-11 >seq1 Length=8525130 Score = 84.2 bits (92), Expect = 5e-11 Identities = 204/306 (67%), Gaps = 5/306 (2%) Strand=Plus/Minus Query 110691 CCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGT---AAGAGA 110747 || ||||| | ||||||||| |||| || || || | ||||||||| ||| | Sbjct 557152 CCCATGTTGCGTGTCTTCAACAACACCGCCCGCTACGTCGACCAAGGTGGTAACAAGCGT 557093 Query 110748 AATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAA 110807 || | || || ||||| || || || ||||| ||||| | ||||| ||| | || Sbjct 557092 CCCGGTGCCTTCGCCATCTACCTTGAGCCCTGGCACGCAGATGTCTTTGAGTTCCTTGAC 557033 Query 110808 CTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGG 110867 ||||| || ||||| || |||||| | || |||||| | || ||| | ||| Sbjct 557032 CTTCGCAAGAATCATGGTAAGGAAGAAGTCCGTGCCCGTGATCTCTTCCTTGCTCTCTGG 556973 Query 110868 ATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCT 110927 ||| | ||| | |||||||| |||||| | | || || |||| | || ||||| || Sbjct 556972 ATTCCCGATCTTTTCATGAAGCGTGTTGAGAAGAACGGAGAGTGGACCCTCATGTG-CCC 556914 Query 110928 CATCG-TTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAA 110986 || || | ||||| || | ||| || || | || || || | ||| ||||| || Sbjct 556913 CAACGAGTGCCCTGGCCTTGCCGATTGCTACGGTGAGGAATTCGAGGCCCTGTACGAGAA 556854 Query 110987 ATATGA 110992 || || Sbjct 556853 GTACGA 556848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812404642986