Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1 149 6e-31 seq3 95.1 1e-14 >seq1 Length=8525130 Score = 149 bits (164), Expect = 6e-31 Identities = 708/1110 (64%), Gaps = 29/1110 (3%) Strand=Plus/Plus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 || || || || ||||| || |||| ||||| | | || | ||| |||| | ||| Sbjct 556056 TTAACAACCTGGAACTCACCAGCCAAGACACGGCGCTGGTAAATGTTGGAAGTGTAGGGC 556115 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 || || ||||||| ||||| | || || | || | ||| ||||||||| || | | Sbjct 556116 TCGAAGCACTCATTGTTGCCAAGAATCTGCGAGGTAGATGCAGTAGGCATGGGAGCAAGC 556175 Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCAC 147072 ||||| || || || | ||||| | | || | ||||| | | | ||| ||||| Sbjct 556176 AACAAAGAGTTGCGGATACCGTGCTCCTTGACCTGCTCCTTGAGGCTATCCCACTCCCAG 556235 Query 147073 ATCGACGA-GGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGACT 147131 | | || |||| | || |||||||||||| | ||||| | || | ||||||| Sbjct 556236 AG-GTCGCTGGGCTTGACATTCCACATGTCGAATTGGAGGATACCCTCAGAGGCGGGAGA 556294 Query 147132 GCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAA-TTCACAGCTTGCCTCGAGCG 147190 ||| ||| |||| |||| || || || ||||| | ||||| || || | Sbjct 556295 GCCCTTGAAAGTAGAGTAGGGACCCTCTTCCTTGGCCAACTGCACAG-AGGCAGTGACGG 556353 Query 147191 CTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGT 147250 | | | ||| ||||| ||| || || ||||| || | || || | |||| Sbjct 556354 CAGCGTGGTAGATGGTCTCGAAAATCTGCTTGTTCAGCTCACGAGCCTCAGGGGACTCGA 556413 Query 147251 AAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTC 147310 | || | ||| ||| | ||||| || || | |||||| | |||||| || || || | Sbjct 556414 AGGGGAGACGTAGAGCGAGGAAGGCGTCAGCAAGACCCTGAACACCGACACCAATGGGAC 556473 Query 147311 GATGCTTTTCGTTGCTGCGCTTCGCGCTCGCT--ATGGGATAGTGGTTGCGATCAATAAT 147368 | || |||||| | | || || || | ||| ||||||||| ||||| || Sbjct 556474 GGTGACGCATGTTGCT--GTTACGAGCCTCCTGAACGGGGTAGTGGTTGACGTCAATGAT 556531 Query 147369 CTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGT 147428 |||||| | ||| || || ||||| | || | | | ||| |||| ||| ||||| | Sbjct 556532 CTTGTTCAAGTTGCGGACAACAACCTGGGTGACTTCATGGAGCTTCTTGAAGTCATACTT 556591 Query 147429 CCCGTCTTCG----ACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGG 147484 || || | | ||| | ||| || | || | || || || |||||||| | Sbjct 556592 GCCCTCGTTGTAGTCAACGAAAGCA--GG--AAGAGCAAGGGAAGCAAGGTTGCAGACAG 556647 Query 147485 CCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGA 147544 | ||| || | | | | ||||| | || || | ||| |||||| || ||| Sbjct 556648 CGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCAGAGGTTGGAGCTGCGGATGG 556707 Query 147545 CTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTC 147604 ||||| || | ||| ||||| || || ||||| ||| ||| |||||||| | || Sbjct 556708 TACCCAAGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGT 556767 Query 147605 CGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGTCCTGCGCTCGCACCC 147661 || |||||| || | |||| ||| ||| | || | ||| || | Sbjct 556768 TACCAGTCTCGGTCTGAGCCTCAAGGATGGCGTACCAA---AGCTTCTGAGCCTTGATGG 556824 Query 147662 GCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGT 147721 || || |||||||| |||||| |||||||| ||| || || || |||| Sbjct 556825 TCTTGCGGCCACGGCCCTCAGCCTCGTACTTCTCGTACAGGGCCTCGAATTCCTCACCGT 556884 Query 147722 AGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGT 147781 |||||||||||||||| || |||| | || ||||| || | |||| ||| | | Sbjct 556885 AGCAATCGGCAAGGCCAGGGCACTCGTTGGGGCACATGAGGGTCCACTCTCCGTTCTTCT 556944 Query 147782 TAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGC 147841 ||| || ||| || ||||| || | ||| || || | ||||| || || | Sbjct 556945 CAACACGCTTCATGAAAAGATCGGGAATCCAGAGAGCAAGGAAGAGATCACGGGC-ACGG 557003 Query 147842 AATCCTCGGCGCCCATGTTGCGTTTCAAA--TTAAGCACGCTATAGATGTCGGCGTGCCA 147899 | | || ||||| | | || | || | ||| | | ||| || |||||||| Sbjct 557004 ACTTCTTCCTTACCATGATTC-TTGCGAAGGTCAAGGAACTCAAAGACATCTGCGTGCCA 557062 Query 147900 GGGTTCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTCGACATGGCG 147956 ||| |||| ||||| ||| | ||||| |||| || || || |||||||| | ||| Sbjct 557063 GGGCTCAAGGTAGATGGCGAAGGCACCGGGACGCTTGTTACCACCTTGGTCGACGTAGCG 557122 Query 147957 CACCATGTTGTTAAACACGCGCACCATGGG 147986 | ||||||| || || |||| |||||| Sbjct 557123 GGCGGTGTTGTTGAAGACACGCAACATGGG 557152 >seq3 Length=4610873 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| ||||| || | | ||||| || ||||||||||||||||||| || || Sbjct 3673432 CGCAGCACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCG 3673491 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || |||||||| ||||||| | |||| |||||||| ||||| ||||| || || || ||| Sbjct 3673492 TCCTCGAGCTGCTTACCGGCAAAGATAAGACGCTGCTGATCAGGAGGGATACCCTCCTTA 3673551 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || ||| || | | || | || || | | ||| ||||| | || | Sbjct 3673552 TCTTGGATCTTTGACTTGACATTGTCGATTGTGTCCGATGACTCAACTTCTAATGTAATA 3673611 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || ||||| ||||| || | || || ||||| Sbjct 3673612 GTCTTGCCAGTAAGAGTCTTGACAAAGATTTGCAT 3673646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476611045101360