Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq1 149 6e-31
seq3 95.1 1e-14
>seq1
Length=8525130
Score = 149 bits (164), Expect = 6e-31
Identities = 708/1110 (64%), Gaps = 29/1110 (3%)
Strand=Plus/Plus
Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952
|| || || || ||||| || |||| ||||| | | || | ||| |||| | |||
Sbjct 556056 TTAACAACCTGGAACTCACCAGCCAAGACACGGCGCTGGTAAATGTTGGAAGTGTAGGGC 556115
Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012
|| || ||||||| ||||| | || || | || | ||| ||||||||| || | |
Sbjct 556116 TCGAAGCACTCATTGTTGCCAAGAATCTGCGAGGTAGATGCAGTAGGCATGGGAGCAAGC 556175
Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCAC 147072
||||| || || || | ||||| | | || | ||||| | | | ||| |||||
Sbjct 556176 AACAAAGAGTTGCGGATACCGTGCTCCTTGACCTGCTCCTTGAGGCTATCCCACTCCCAG 556235
Query 147073 ATCGACGA-GGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGACT 147131
| | || |||| | || |||||||||||| | ||||| | || | |||||||
Sbjct 556236 AG-GTCGCTGGGCTTGACATTCCACATGTCGAATTGGAGGATACCCTCAGAGGCGGGAGA 556294
Query 147132 GCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAA-TTCACAGCTTGCCTCGAGCG 147190
||| ||| |||| |||| || || || ||||| | ||||| || || |
Sbjct 556295 GCCCTTGAAAGTAGAGTAGGGACCCTCTTCCTTGGCCAACTGCACAG-AGGCAGTGACGG 556353
Query 147191 CTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGT 147250
| | | ||| ||||| ||| || || ||||| || | || || | ||||
Sbjct 556354 CAGCGTGGTAGATGGTCTCGAAAATCTGCTTGTTCAGCTCACGAGCCTCAGGGGACTCGA 556413
Query 147251 AAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTC 147310
| || | ||| ||| | ||||| || || | |||||| | |||||| || || || |
Sbjct 556414 AGGGGAGACGTAGAGCGAGGAAGGCGTCAGCAAGACCCTGAACACCGACACCAATGGGAC 556473
Query 147311 GATGCTTTTCGTTGCTGCGCTTCGCGCTCGCT--ATGGGATAGTGGTTGCGATCAATAAT 147368
| || |||||| | | || || || | ||| ||||||||| ||||| ||
Sbjct 556474 GGTGACGCATGTTGCT--GTTACGAGCCTCCTGAACGGGGTAGTGGTTGACGTCAATGAT 556531
Query 147369 CTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGT 147428
|||||| | ||| || || ||||| | || | | | ||| |||| ||| ||||| |
Sbjct 556532 CTTGTTCAAGTTGCGGACAACAACCTGGGTGACTTCATGGAGCTTCTTGAAGTCATACTT 556591
Query 147429 CCCGTCTTCG----ACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGG 147484
|| || | | ||| | ||| || | || | || || || |||||||| |
Sbjct 556592 GCCCTCGTTGTAGTCAACGAAAGCA--GG--AAGAGCAAGGGAAGCAAGGTTGCAGACAG 556647
Query 147485 CCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGA 147544
| ||| || | | | | ||||| | || || | ||| |||||| || |||
Sbjct 556648 CGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCAGAGGTTGGAGCTGCGGATGG 556707
Query 147545 CTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTC 147604
||||| || | ||| ||||| || || ||||| ||| ||| |||||||| | ||
Sbjct 556708 TACCCAAGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGT 556767
Query 147605 CGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGTCCTGCGCTCGCACCC 147661
|| |||||| || | |||| ||| ||| | || | ||| || |
Sbjct 556768 TACCAGTCTCGGTCTGAGCCTCAAGGATGGCGTACCAA---AGCTTCTGAGCCTTGATGG 556824
Query 147662 GCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGT 147721
|| || |||||||| |||||| |||||||| ||| || || || ||||
Sbjct 556825 TCTTGCGGCCACGGCCCTCAGCCTCGTACTTCTCGTACAGGGCCTCGAATTCCTCACCGT 556884
Query 147722 AGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGT 147781
|||||||||||||||| || |||| | || ||||| || | |||| ||| | |
Sbjct 556885 AGCAATCGGCAAGGCCAGGGCACTCGTTGGGGCACATGAGGGTCCACTCTCCGTTCTTCT 556944
Query 147782 TAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGC 147841
||| || ||| || ||||| || | ||| || || | ||||| || || |
Sbjct 556945 CAACACGCTTCATGAAAAGATCGGGAATCCAGAGAGCAAGGAAGAGATCACGGGC-ACGG 557003
Query 147842 AATCCTCGGCGCCCATGTTGCGTTTCAAA--TTAAGCACGCTATAGATGTCGGCGTGCCA 147899
| | || ||||| | | || | || | ||| | | ||| || ||||||||
Sbjct 557004 ACTTCTTCCTTACCATGATTC-TTGCGAAGGTCAAGGAACTCAAAGACATCTGCGTGCCA 557062
Query 147900 GGGTTCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTCGACATGGCG 147956
||| |||| ||||| ||| | ||||| |||| || || || |||||||| | |||
Sbjct 557063 GGGCTCAAGGTAGATGGCGAAGGCACCGGGACGCTTGTTACCACCTTGGTCGACGTAGCG 557122
Query 147957 CACCATGTTGTTAAACACGCGCACCATGGG 147986
| ||||||| || || |||| ||||||
Sbjct 557123 GGCGGTGTTGTTGAAGACACGCAACATGGG 557152
>seq3
Length=4610873
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||| ||||| || | | ||||| || ||||||||||||||||||| || ||
Sbjct 3673432 CGCAGCACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCG 3673491
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
|| |||||||| ||||||| | |||| |||||||| ||||| ||||| || || || |||
Sbjct 3673492 TCCTCGAGCTGCTTACCGGCAAAGATAAGACGCTGCTGATCAGGAGGGATACCCTCCTTA 3673551
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| || ||| || | | || | || || | | ||| ||||| | || |
Sbjct 3673552 TCTTGGATCTTTGACTTGACATTGTCGATTGTGTCCGATGACTCAACTTCTAATGTAATA 3673611
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || ||||| ||||| || | || || |||||
Sbjct 3673612 GTCTTGCCAGTAAGAGTCTTGACAAAGATTTGCAT 3673646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476611045101360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |