Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq1 248 1e-59
>seq1
Length=8525130
Score = 248 bits (274), Expect = 1e-59
Identities = 433/616 (70%), Gaps = 18/616 (3%)
Strand=Plus/Plus
Query 1455715 CGAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCG 1455774
|||||| | || | || ||||| |||||||| || || ||||||||| |||||
Sbjct 3938950 CGAGCCCATCCTCCAGGAGAACCCCAACCGCTTCGTTCTCTTCCCCATCAAGTACCACGA 3939009
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| | |||||| || |||||||||||||| || ||||| ||||| || |||| |
Sbjct 3939010 GATCTGGCAGATGTAC-AAGAAGGCCGAGGCCTCATTCTGGACAGCCGAAGAAATCGATC 3939068
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CG-CTGAGCGACGACGAGCGCCATTTCATCA 1455891
| | || | | | ||| || || | ||| |||||| | ||||||
Sbjct 3939069 TTTCCAAGGATCTGCACGATTGGAACAACCGTCTCAACGATGACGAGAAATACTTCATCT 3939128
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
||| | || ||||| ||| |||||| || || || || ||||||||| ||
Sbjct 3939129 CCCACATTCTTGCCTTCTTT-GCCGCCTCTGACGGTATTGTTAACGAGAACCTTCTCGAG 3939187
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
||||| || |||||||| | || |||| || | || ||||| |||||||||
Sbjct 3939188 CGCTTCTCCAACGAGGTCCAGATTCCCGAGGGTCGCTGCTTCTACGGTTTCCAGATCATG 3939247
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071
|| || |||||||||||||| || ||||| || || || || |||||||||||||| ||
Sbjct 3939248 ATGGAGAACATCCACTCTGAGACATACTCCCTGCTTATTGATACCTACGTCAAGGAGCCT 3939307
Query 1456072 GTCGAGAAGGAC-CACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGC 1456130
| || | || ||||||| |||||| || || | || | | | || |||||
Sbjct 3939308 ACCCAG-CGCACATACCTCTTCAACGCCATTGAGACCATTCCCTGTATCCGCAAGAAGGC 3939366
Query 1456131 CGACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTC 1456187
||||||||| ||||||||||| ||||| | ||| || |||||| |||| |||
Sbjct 3939367 CGACTGGGCCCTGAAGTGGATCTCTGACAAGAA----CTCTAC-CTTTGCTCAGCGTCTC 3939421
Query 1456188 GTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGG 1456246
|| | |||||| | ||||||||| ||||| ||||| || || | ||||||| |||
Sbjct 3939422 GTTGCCTTTGCTGCCGTCGAGGGTATCTTCTTCTCTGGTGCCTTTGCCTCCATCTTCTGG 3939481
Query 1456247 CTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGA 1456306
|||||||||||||| ||||||||||||| | ||| |||||| | ||| ||| ||
Sbjct 3939482 CTCAAGAAGCGCGGTCTCATGCCCGGTC-TGACCTTCTCCAACGAGCTCATCTCTCGTGA 3939540
Query 1456307 CGA-AGTTTTCACCCC 1456321
||| || ||||| ||
Sbjct 3939541 CGAGGGTCTTCACACC 3939556
Score = 158 bits (174), Expect = 2e-32
Identities = 352/527 (67%), Gaps = 1/527 (0%)
Strand=Plus/Minus
Query 332810 ACCTTTTCGGCGGCGACAATCTCGCGCAGGCGACCGGCGATTTGGGCGTCAGTGAGGCGC 332869
||||||||||| ||| ||||| |||||| | ||| || ||||| || ||
Sbjct 3019604 ACCTTTTCGGCCTCGATAATCTGCATCAGGCGCTTGACGACCTGCGCGTCGGTCAGTTTG 3019545
Query 332870 ACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTG 332929
| ||||||||||||| || | |||||| | |||||||| | | ||| ||||
Sbjct 3019544 GCGTAGCGCAGGATGGCGCATCTCGACTGCAGCGGCTCGATGATCTTGTTGGACTGGTTG 3019485
Query 332930 CAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGT 332989
||||| | ||| || || ||||| |||| | |||||||||| |||||||||||
Sbjct 3019484 CAGGCAAAGGCGAAGCGGGTCGTGTTGGAGTAGATTTCCATGGTACGGCGGAGGGCCTGC 3019425
Query 332990 TGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGC 333049
|| || ||| || | || |||||| |||||||| |||| || ||||||||| ||
Sbjct 3019424 TGCGCGCCCGAGGTCATGCTGTCGGCTTCGTCGAGAATGACGAGCTTGTGGCGGCCAGCA 3019365
Query 333050 GGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTCCACGCCG 333109
|| || || | ||| ||| | ||||| |||||||||||||| | |||
Sbjct 3019364 GGGAGTGTGACTTTCTTCTGGGCAAAGCCCTTGATTCGGTTGCGCACGACGTCGATACCG 3019305
Query 333110 CGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCGGCCGCACCCAAGAGGACG 333169
|||||||| |||||||| ||||| |||||||| | | | | || | || ||
Sbjct 3019304 CGCTCGTCACTGGCGTTGAGCTCGAGAACGGCCTCCTTGTACGTGTCGCCGAGCAGTTCG 3019245
Query 333170 CGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGACCCGCCAGCAAGAGG 333229
|| |||||||| || || ||||||| || | || ||| || | | | || |
Sbjct 3019244 CGGGCCAGGCAGAGGACACTGCTGGTCTTTCCGATACCAGGCATGCCGGAGATGATGACG 3019185
Query 333230 TTGGGCATGTTGCCGTCGGCGGCCAGCGCCTTGAGGTAGGCAACGGCGTGCTCGTTGCCG 333289
| |||||||| || || ||| | ||||||| ||| || | ||||||||
Sbjct 3019184 TGCGGCATGTTCCCTTCCTTGGCGATGATCTTGAGGCGCTCAATGGTTTCGACGTTGCCG 3019125
Query 333290 ACAATGTCGTCGAGCACCATTGGGCGGTACTTTTCGATCC-ATGGGA 333335
|| | || ||||| | | || ||||| || || | || ||||||
Sbjct 3019124 ACTACATCATCGAGGAAGACGGGTCGGTATTTCTCAACCCTATGGGA 3019078
Score = 143 bits (158), Expect = 4e-28
Identities = 335/503 (67%), Gaps = 17/503 (3%)
Strand=Plus/Minus
Query 259680 AGCACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACT 259739
||||||| |||| || ||| ||||||| | ||| ||| ||||| |||| |||||
Sbjct 557595 AGCACAAAGAGGAGCTTGACTCTGCCATTGTCTACGACCGTGACTTCAACTACCAGTACT 557536
Query 259740 TTGGTCTGGCGAC-CTTGCGCCGGTCCTACCTGACCAAAGTGCGCGATATTGTCGTCGAG 259798
| || | ||| |||| || | || |||||| ||| | || | ||||||||
Sbjct 557535 TCGGCTTCAAGACTCTTGAGC-GCTCATACCTGCTCAAGATTGACGGCAAGATCGTCGAG 557477
Query 259799 CGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGAC 259858
|| |||||| | ||| ||||| | ||||| | || ||| |||| |||
Sbjct 557476 CGTCCCCAGCACATGATCATGAGAGTCGCTGTCGGT-ATTTGGGGT-----------GAC 557429
Query 259859 AATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCA 259918
|| | |||| || |||| |||||| | |||||| | |||| ||||||
Sbjct 557428 AACA---TCGAGCGTGTTCTCGAGACCTACAACCTCATGTCTAACAAGTTCTTCACCCAT 557372
Query 259919 GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTG 259978
|| | || || ||||| || ||||| || || | ||| ||| || ||||| ||
Sbjct 557371 GCCTCCCCTACCCTCTTCAACGCCGGTACACCCCAGTGCCAGCTTTCTTCCTGCTTCTTG 557312
Query 259979 TTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTC 260038
| |||||||||| ||| || ||||| || || || || |||||| || || |
Sbjct 557311 GTTGACATGAAGGAGGATAGCATTGAGGGTATTTACGATACCCTCAAGACCTGTGCCATG 557252
Query 260039 ATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCC 260098
||||||||| ||| || ||||| ||| | ||| ||| | || ||| | ||| |
Sbjct 557251 ATCTCCAAGATGGCTGGTGGCATTGGTCTCAACGCCCACCGCATCCGTGCCACAGGCTCT 557192
Query 260099 TACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAAC 260158
||| | || || |||||||| |||||||| | | |||||| | || || || |||
Sbjct 557191 TACATCGCTGGTACCAACGGTACCTCCAACGGTGTCATCCCCATGTTGCGTGTCTTCAAC 557132
Query 260159 GACACGGCGCGCTACGTCGACCA 260181
|||| || ||||||||||||||
Sbjct 557131 AACACCGCCCGCTACGTCGACCA 557109
Score = 107 bits (118), Expect = 3e-17
Identities = 181/255 (71%), Gaps = 8/255 (3%)
Strand=Plus/Plus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
|||||| || || ||| || ||| | ||||| | | |||| | || || | |||
Sbjct 3939620 ATCATCACTGACGCTGTCACCATTGAGCAGGAGTTCCTTACCGAGGCTCTTCC--TTGCG 3939677
Query 1456583 CTCA--TCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCG 1456640
||| ||||||||||||||| | |||||| ||||||||||| || ||||| || ||
Sbjct 3939678 CTCTGCTCGGCATGAACGCCAAC-CTCATGAAGCAGTACATTGAGTTC-GTCGCTGATCG 3939735
Query 1456641 CCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGA 1456700
|| |||| || || ||| || ||||| ||| | | ||||||| ||| | |
Sbjct 3939736 TCTCCTCGTCGCTCTTGGCAACG-AGAAGATTTACAAGTCCACCAACCCCTTCGACTTCA 3939794
Query 1456701 TGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACG 1456759
||||| ||||| || | |||||||||||||| |||||| || | ||||||||||
Sbjct 3939795 TGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTACC 3939854
Query 1456760 CCAAGGCCGGCGTCA 1456774
|||||||| ||||
Sbjct 3939855 AGAAGGCCGGTGTCA 3939869
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177808692252212
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |