Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq3 143 3e-29 seq7 114 1e-20 seq1 98.7 1e-15 >seq3 Length=4610873 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||| || || || |||||||| || |||||||||||| | Sbjct 3673648 CCACCACGGAGGCGGAGAACGAGATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAA 3673707 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| |||||||||| |||||||| || || || Sbjct 3673708 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGAGGG 3673767 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | |||||||| || || || Sbjct 3673768 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATAGTGTCGGAAGACTCAACC 3673827 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| |||||||| || ||||| ||||| || ||||| || ||||| Sbjct 3673828 TCGAGGGTAATGGTCTTTCCGGTCAAAGTCTTGACGAAGATCTGCAT 3673874 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||| ||| | ||| || || || ||||| |||||||||||||||| Sbjct 3673420 CCACCACGGAGACGCAGCACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGCTC 3673479 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || ||| |||||||| || || ||||| || | |||||||||||| || || Sbjct 3673480 AGAGTGCGACCGTCCTCGAGCTGCTTACCGGCAAAGATAAGACGCTGCTGATCAGGAGGG 3673539 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || ||||| || ||| ||||| ||| | |||||| || || || || Sbjct 3673540 ATACCCTCCTTATCTTGGATCTTTGACTTGACATTGTCGATTGTGTCCGATGACTCAACT 3673599 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||||| || || || || | ||| || || || |||||||| Sbjct 3673600 TCTAATGTAATAGTCTTGCCAGTAAGAGTCTTGACAAAGATTTGCAT 3673646 Score = 109 bits (120), Expect = 6e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| || ||| ||||| ||||||||||| || | |||| | || ||| Sbjct 3673894 ACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCATCCTCG 3673953 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| || ||||||| |||||||| || || || || || || || || ||| Sbjct 3673954 AGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCAGGGGGAATTCCCTCCTTGTCCTGA 3674013 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | |||||||| || || || ||||| |||||||| || Sbjct 3674014 ATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCAACCTCGAGGGTAATGGTCTTG 3674073 Query 134685 CCGGT 134689 ||||| Sbjct 3674074 CCGGT 3674078 >seq7 Length=1200748 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || ||||| ||||| || |||||||||||| | |||| | || ||| Sbjct 1041547 ACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCG 1041488 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| || || |||| |||||||| || || || || || || || || || Sbjct 1041487 AGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTATCCTGG 1041428 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | |||||||| || ||||| || || || || || || Sbjct 1041427 ATCTTGGACTTGACATTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTT 1041368 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || | || || |||||||| ||||| ||| Sbjct 1041367 CCCGTAAGGGTCTTGACGAAAATCTGCATCTTG 1041335 >seq1 Length=8525130 Score = 98.7 bits (108), Expect = 1e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 |||| || |||||||||||| | |||| | || |||||||| ||||| || || | Sbjct 1348138 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGA 1348079 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 ||| |||||||| || || || ||||| || || || || || || ||||| || Sbjct 1348078 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGT 1348019 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | ||||| || || || || ||||| |||||||| ||||| || | || || |||| Sbjct 1348018 CGATGGTGTCCGAGGACTCGACCTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTCACGA 1347959 Query 134704 AA 134705 || Sbjct 1347958 AA 1347957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398235745520