Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1 131 2e-25 >seq1 Length=8525130 Score = 131 bits (144), Expect = 2e-25 Identities = 566/885 (64%), Gaps = 24/885 (3%) Strand=Plus/Plus Query 69351 GATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAA 69410 ||| || |||| || | ||| || ||||| ||| ||| ||||||||| || || || Sbjct 556703 GATGGTACCCAAGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAA 556762 Query 69411 CGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTAT 69470 || ||||||| || |||||| || | || | | ||||| | ||| || || Sbjct 556763 GGGGTTACCAGTCTCGGTCTGAGCCTCAAGGATGGCGTACCAAAGCTTCTGAGCCTTGAT 556822 Query 69471 TACGGTCTTGTA---ACGCTTCTCTTTTTCATA-TTGT-GTATATAGCCGTTCGAATTCA 69525 ||||||| ||| ||| || || || | ||| | ||| |||||||| Sbjct 556823 ---GGTCTTGCGGCCACGGCCCTCAGCCTCGTACTTCTCGTACAGGGCC--TCGAATTCC 556877 Query 69526 TCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCA 69585 || || | ||| | | ||||| || || || || ||||| | | |||| | | Sbjct 556878 TCACCGTAGCAATCGGCAAGGCCAGGGCACTCGTTGGGGCACATGAGGGTCCACTCTCCG 556937 Query 69586 TCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTG 69645 | | || ||| || ||||| || |||||||||||||| ||||| | |||||||| | | Sbjct 556938 TTCTTCTCAACACGCTTCATGAAAAGATCGGGAATCCAGAGAGCAAGGAAGAGATCACGG 556997 Query 69646 GTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAA 69705 | | |||||| || || ||| || ||| || || ||||| | | ||| | Sbjct 556998 GCACGGACTTCTTCCTTACCATGATTCTTGCGAAGGTCAAGGAACTCAAAGACATCTGCG 557057 Query 69706 TGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATG 69765 ||||| || || || || || || | | | || || || || || || || || || | | Sbjct 557058 TGCCAGGGCTCAAGGTAGATGGCGAAGGCACCGGGACGCTTGTTACCACCTTGGTCGACG 557117 Query 69766 TATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTT 69825 || | ||| ||||| || |||| | || ||| || || | ||| || || |||| || Sbjct 557118 TAGCGGGCGGTGTTGTTGAAGACACGCAACATGGGGATGACACCGTTGGAGGTACCGTTG 557177 Query 69826 GTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT-AGACCTATTCCTCC 69884 || |||| || ||| ||| | || || || | | | ||||| || || || Sbjct 557178 GTACCAGCGATGTAAGAGCCTGTGGCACGGAT-GCGGTGGGCGTTGAGACCAATGCCACC 557236 Query 69885 TGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATC 69944 ||||| || ||||| | ||||| || | || || || |||||||| |||||||| Sbjct 557237 AGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTATCGTAAATACCCTCAATGCTATC 557296 Query 69945 ATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAA 70004 || |||||| || | || ||| ||| | || || || || || || || Sbjct 557297 CTCCTTCATGTCAACCAAGAAGCAGGAAGAAAGCTGGCACTGGGGTGTACCGGCGTTGAA 557356 Query 70005 TAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATA-- 70062 | ||||| || || || ||||| | || | ||| | || ||||| || || | | Sbjct 557357 GAGGGTAGGGGAGGCATGGGTGAAGAACTTGTTAGACATGAGGTTGTAGGTCTCGAGAAC 557416 Query 70063 --GCT-GATTCTAT-ATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTG 70118 ||| ||| | | | |||| ||| || | ||||| | ||| | ||| ||||| Sbjct 557417 ACGCTCGATGTTGTCACCCCA------AATACCGACAGCGACTCTCATGATCATGTGCTG 557470 Query 70119 AGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAA 70178 || || || || | || | || || | ||||||||| || ||||| || || Sbjct 557471 GGGACGCTCGACGATCTTGCCGTCAATCTTGAGCAGGTATGAGCGCTCAAGAGTCTTGAA 557530 Query 70179 CCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGA 70223 || || || | ||| ||||| | ||||| | ||| |||| Sbjct 557531 GCCGAAGTACTGGTAGTTGAAGTCACGGTCGTAGACAATGGCAGA 557575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908576754640