Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq1 131 2e-25
>seq1
Length=8525130
Score = 131 bits (144), Expect = 2e-25
Identities = 566/885 (64%), Gaps = 24/885 (3%)
Strand=Plus/Plus
Query 69351 GATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAA 69410
||| || |||| || | ||| || ||||| ||| ||| ||||||||| || || ||
Sbjct 556703 GATGGTACCCAAGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAA 556762
Query 69411 CGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTAT 69470
|| ||||||| || |||||| || | || | | ||||| | ||| || ||
Sbjct 556763 GGGGTTACCAGTCTCGGTCTGAGCCTCAAGGATGGCGTACCAAAGCTTCTGAGCCTTGAT 556822
Query 69471 TACGGTCTTGTA---ACGCTTCTCTTTTTCATA-TTGT-GTATATAGCCGTTCGAATTCA 69525
||||||| ||| ||| || || || | ||| | ||| ||||||||
Sbjct 556823 ---GGTCTTGCGGCCACGGCCCTCAGCCTCGTACTTCTCGTACAGGGCC--TCGAATTCC 556877
Query 69526 TCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCA 69585
|| || | ||| | | ||||| || || || || ||||| | | |||| | |
Sbjct 556878 TCACCGTAGCAATCGGCAAGGCCAGGGCACTCGTTGGGGCACATGAGGGTCCACTCTCCG 556937
Query 69586 TCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTG 69645
| | || ||| || ||||| || |||||||||||||| ||||| | |||||||| | |
Sbjct 556938 TTCTTCTCAACACGCTTCATGAAAAGATCGGGAATCCAGAGAGCAAGGAAGAGATCACGG 556997
Query 69646 GTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAA 69705
| | |||||| || || ||| || ||| || || ||||| | | ||| |
Sbjct 556998 GCACGGACTTCTTCCTTACCATGATTCTTGCGAAGGTCAAGGAACTCAAAGACATCTGCG 557057
Query 69706 TGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATG 69765
||||| || || || || || || | | | || || || || || || || || || | |
Sbjct 557058 TGCCAGGGCTCAAGGTAGATGGCGAAGGCACCGGGACGCTTGTTACCACCTTGGTCGACG 557117
Query 69766 TATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTT 69825
|| | ||| ||||| || |||| | || ||| || || | ||| || || |||| ||
Sbjct 557118 TAGCGGGCGGTGTTGTTGAAGACACGCAACATGGGGATGACACCGTTGGAGGTACCGTTG 557177
Query 69826 GTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT-AGACCTATTCCTCC 69884
|| |||| || ||| ||| | || || || | | | ||||| || || ||
Sbjct 557178 GTACCAGCGATGTAAGAGCCTGTGGCACGGAT-GCGGTGGGCGTTGAGACCAATGCCACC 557236
Query 69885 TGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATC 69944
||||| || ||||| | ||||| || | || || || |||||||| ||||||||
Sbjct 557237 AGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTATCGTAAATACCCTCAATGCTATC 557296
Query 69945 ATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAA 70004
|| |||||| || | || ||| ||| | || || || || || || ||
Sbjct 557297 CTCCTTCATGTCAACCAAGAAGCAGGAAGAAAGCTGGCACTGGGGTGTACCGGCGTTGAA 557356
Query 70005 TAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATA-- 70062
| ||||| || || || ||||| | || | ||| | || ||||| || || | |
Sbjct 557357 GAGGGTAGGGGAGGCATGGGTGAAGAACTTGTTAGACATGAGGTTGTAGGTCTCGAGAAC 557416
Query 70063 --GCT-GATTCTAT-ATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTG 70118
||| ||| | | | |||| ||| || | ||||| | ||| | ||| |||||
Sbjct 557417 ACGCTCGATGTTGTCACCCCA------AATACCGACAGCGACTCTCATGATCATGTGCTG 557470
Query 70119 AGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAA 70178
|| || || || | || | || || | ||||||||| || ||||| || ||
Sbjct 557471 GGGACGCTCGACGATCTTGCCGTCAATCTTGAGCAGGTATGAGCGCTCAAGAGTCTTGAA 557530
Query 70179 CCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGA 70223
|| || || | ||| ||||| | ||||| | ||| ||||
Sbjct 557531 GCCGAAGTACTGGTAGTTGAAGTCACGGTCGTAGACAATGGCAGA 557575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908576754640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |