Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq1 131 1e-25
>seq1
Length=8525130
Score = 131 bits (144), Expect = 1e-25
Identities = 330/496 (67%), Gaps = 17/496 (3%)
Strand=Plus/Minus
Query 19357 CTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTT 19416
|| || || || || ||| || || || || ||||| ||| | || ||||| | ||
Sbjct 321712 CTCTACGGTCCTCCCGGTACCGGTAAGACGTTGATTGCTAGACAGATTGGTAAAATGCTC 321653
Query 19417 ACAAAACA-ACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCA 19475
| | || ||| || || | | || ||||| || || | ||||| ||||| |||||
Sbjct 321652 A-ATGCCAGACCGCCAAAGGTCATCAACGGTCCGGAGGTCCTTAATAAGTATGTCGGTCA 321594
Query 19476 ATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGG 19535
|| ||||| || | ||| |||||| || || ||| | ||| | ||| | |||
Sbjct 321593 GTCAGAAGAGAACATTCGAAAGATGTTTGGAGATGCCGAAAAGGAATACAAA-GAAAAGG 321535
Query 19536 GCGCAAAAGTTCTT---TGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCA 19592
||| | ||| || ||||||| || || | ||||||||||| || ||||||||||
Sbjct 321534 GCG-ACGAGT-CTGGCCTGCACATCATCATTTTCGATGAATTGGATGCTGTCTGTAAGCA 321477
Query 19593 AAGAGGTTCTGGT---------GTAAATGGAGTACATGACACTGTTGTCAATCAACTCCT 19643
| || |||||| | | |||||| ||||| |||||| || || || ||
Sbjct 321476 GCGTGGATCTGGTGCTGGTGGCGGCACTGGAGTTGGTGACAGTGTTGTTAACCAGCTTCT 321417
Query 19644 GTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAG 19703
||||||| | |||||||| |||| |||| |||||| | |||| || |||||||| |
Sbjct 321416 GTCAAAACTTGACGGTGTCGACCAGTTGAACAATATTCTCCTTATCGGTATGACTAACCG 321357
Query 19704 ACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAAT 19763
||| | || || || | || ||||| ||||| | ||| | | | |||||
Sbjct 321356 TAAGGATATGATTGATGATGCTCTGTTGCGACCTGGTCGTCTTGAAGTGCATCTAGAAAT 321297
Query 19764 TAACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCG 19823
|||||||||| |||||| ||||||| | || || || || | | |||||
Sbjct 321296 CTCTCTACCCGATGAGGCTGGACGATTGGAAATCATTAAGATTCACACGGCCAAGATGCG 321237
Query 19824 ACAAAATAACCTTTTA 19839
| ||| |||||| ||
Sbjct 321236 AACAAACAACCTTCTA 321221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455874056130
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |