Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 3e-15 >seq1 Length=8525130 Score = 98.7 bits (108), Expect = 3e-15 Identities = 119/161 (74%), Gaps = 1/161 (1%) Strand=Plus/Plus Query 443707 AGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCC 443766 |||| || || || ||||||| ||||| || | || || || |||| |||||| Sbjct 3939414 AGCGTCTCGTTGCCTTTGCTGCCGTCGAGGGTATCTTCTTCTCTGGTGCCTTT-GCCTCC 3939472 Query 443767 ATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATC 443826 ||||||||| | || ||||| || || |||| |||||||||||| ||||| || ||| Sbjct 3939473 ATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTGACCTTCTCCAACGAGCTCATC 3939532 Query 443827 AGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 ||| ||||||||| | || |||||| ||||| ||||| Sbjct 3939533 TCTCGTGACGAGGGTCTTCACACCGACTTTGCCTGCCTTCT 3939573 Score = 84.2 bits (92), Expect = 7e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 254978 ATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAA 255037 || || ||| | ||||| ||||||||| || ||||||||||| ||||| || ||| Sbjct 557155 ATCCCCATGTTGCGTGTCTTCAACAACACCGCCCGCTACGTCGACCAAGGTGGTAACAAG 557096 Query 255038 CGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081 || || || || ||| |||||||||| ||||| |||||||| || Sbjct 557095 CGTCCCGGTGCCTTCGCCATCTACCTTGAGCCCTGGCACGCAGA 557052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588335470885570