Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq1 201 1e-46
>seq1
Length=8525130
Score = 201 bits (222), Expect = 1e-46
Identities = 899/1399 (64%), Gaps = 39/1399 (3%)
Strand=Plus/Plus
Query 110706 GGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGG 110765
|||| ||||| | ||||| || || ||||| ||||| || || | || || | ||| |
Sbjct 556093 GGTAAATGTTGGAAGTGTAGGGCTCGAAGCACTCATTGTTGCCAAGAATCTGCGAGGTAG 556152
Query 110766 AGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTT 110825
| || || ||||| || || | ||| | | ||| || | ||| | |||||||| | |
Sbjct 556153 ATGCAGTAGGCATGGGAGCAAGCAACAAAGAGTTGCGGATACCGTGCTCCTTGACCTGCT 556212
Query 110826 CCTTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTGA 110884
||||||| |||||| || || | ||| || || || |||| ||||||| || ||
Sbjct 556213 CCTTGAGGCTATCCCACTCCCAGAGGTCGCTGGGCTTGACATTCC-ACATGTCGAATTGG 556271
Query 110885 AGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCC 110944
|| | || | || |||||||| |||| || || |||| ||| | | | |||
Sbjct 556272 AGGATACCCTCAGAGGCGGGAGAGCCCTTGAAAGTAGAGTAGGGACCCTCTTCCTTGGCC 556331
Query 110945 AATT-CACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003
|| | ||||| || | || ||||| || ||||| || || || | ||||
Sbjct 556332 AACTGCACAGAG-GCAGTGACGGCAGCGTGGTAGATGGTCTCGAAAATCTGCTTGTTCAG 556390
Query 111004 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGAC 111062
||| || ||| || || || | | || | | | | || | || || ||||
Sbjct 556391 CTCACGAGCCTCAGGGGACTCGAAGGGG-AGACGTAGAGCGAGGAAGGCGTCAGCAAGAC 556449
Query 111063 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGG 111122
| |||||||| | |||||| || | ||| ||||| || || || || || |||||
Sbjct 556450 CCTGAACACCGACACCAATGGGACGGTGACGCATGTTGCTGTTACGAGCCTCCTGAACGG 556509
Query 111123 GATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCAT 111182
| || || |||||||| ||| | || | ||||| || |||| |||||
Sbjct 556510 GGTAGTGGTTGACGTCAATGATCTTGTTCAAGTTGCGGACAACAACCTGGGTGACTTCAT 556569
Query 111183 GAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACAT---ACTTTGGAAGGGCGA 111239
| || || | | ||| | ||| ||| | | | || | ||||| || |
Sbjct 556570 GGAGCTTCTTGAAGTCATACTTGCC---CTCGTTGTAGTCAACGAAAGCAGGAAGAGCAA 556626
Query 111240 TTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTAC 111299
|| || | ||||| ||||| |||||| | |||||| | ||| || || |
Sbjct 556627 GGGAAGCAAGGTTGCAGACAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGC 556686
Query 111300 ATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCAT 111359
| | |||||| || || || ||||| ||||| ||||| ||||| |||||| |
Sbjct 556687 AGAGGTTGGAGCTGCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGT 556746
Query 111360 CCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA 111419
|||||||||||||| |||| | || ||||| ||||| | | || || || | |||||
Sbjct 556747 CCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCAAGGATGGCGTACCAAA 556806
Query 111420 -CATCGGCGGCTGGTACAATGGCGTTG--GCC-CGTCCCTCCGCCTCGTACTTTGTGTAG 111475
| || | | || | |||| ||| ||| || ||||| ||||||||||| |||
Sbjct 556807 GCTTCTGAGCCTTG----ATGGTCTTGCGGCCACGGCCCTCAGCCTCGTACTTCTCGTAC 556862
Query 111476 AGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAA 111535
||||| || || |||||||| |||| || || || || || || || |
Sbjct 556863 AGGGCCTCGAATTCCTCACCGTAGCAATCGGCAAGGCCAGGGCACTCGTTGGGGCACATG 556922
Query 111536 AGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGAT 111595
|| | ||| | || | |||||| |||||||||||||| || |||||||| || |
Sbjct 556923 AGGGTCCACTCTCCGTTCTTCTCAACACGCTTCATGAAAAGATCGGGAATCCAGAGAGCA 556982
Query 111596 GAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAA 111654
|||||||| | ||| || | ||||| | ||| || || || | ||||||||
Sbjct 556983 AGGAAGAGATCACGGGCACGGA-CTTCTTCCTTACCATGATTCTTGCGAAGGTCAAGGAA 557041
Query 111655 CTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC-- 111712
||| | || ||| |||||||| |||||||| |||| |||| | || |||||
Sbjct 557042 CTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCGAAGGCACC---GGGACGCTT 557098
Query 111713 ----CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAAT 111768
||| |||| | || ||||| || ||| ||| || || || | ||| || || |
Sbjct 557099 GTTACCACCTTGGTCGACGTAGCGGGCGGTGTTGTTGAAGACACGCAACATGGGGATGAC 557158
Query 111769 ACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATCATGG 111826
||| | || ||| || || || ||| || ||| | |||| | | |||
Sbjct 557159 ACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCT--GTGGCACGGATGCGGTGG 557216
Query 111827 ATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCA 111886
|| | ||||| || |||||| ||| ||||| ||||| | | || || |
Sbjct 557217 GCGTTGAGACCAATGCCACCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGGGTATCG 557276
Query 111887 TAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGT 111946
|| ||||| | || |||||||| || | | | |||||| || | ||| |
Sbjct 557277 TAAATACCCTCAATGCTATCCTCCTTCATGTCAACCAAGAAGCAGGAAGAAAGCTG-GCA 557335
Query 111947 CT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACA 112004
|| |||||||| || ||||||||||| || | || || |||| | || | | ||||
Sbjct 557336 CTGGGGTGTACCGGCGTTGAAGAGGGTAGGGGAGGCATGGGTGAAGA-ACTTGTTAGACA 557394
Query 112005 TCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCC 112064
| || ||| ||||| | ||| || |||| || || || |||| ||||| |
Sbjct 557395 TGAGGTTGTAGGTCTCGAGAACACGCTCGATGTTGTCACCCCAAATACCGACAGCGACTC 557454
Query 112065 GCATGAACATGTACTGTGG 112083
||||| ||||| ||| ||
Sbjct 557455 TCATGATCATGTGCTGGGG 557473
Score = 89.7 bits (98), Expect = 6e-13
Identities = 146/208 (70%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717
|||||| || ||| |||||||| || || || || || || || |||||| |||||
Sbjct 3939565 GGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACC 3939506
Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777
||||||||||| |||||||| | ||| | || | | || | || |||||||||||
Sbjct 3939505 GGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCAGAGAAGAAGAT 3939446
Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG-AGCGAGACTTTGCATCAA 122836
|||||| || ||||| |||| || || | || |||| || | ||| || |
Sbjct 3939445 ACCCTCGACGGCAGCAAAGGCAACGAGACGCTGAGCAAAGGTAGAG-TTCTTGTCAGAGA 3939387
Query 122837 ACCATTTCATTGCCCATTTCGCCTTCTT 122864
||| |||| ||||| | ||||||||
Sbjct 3939386 TCCACTTCAGGGCCCAGTCGGCCTTCTT 3939359
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031795889600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |