Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1 194 2e-44 >seq1 Length=8525130 Score = 194 bits (214), Expect = 2e-44 Identities = 580/878 (66%), Gaps = 33/878 (4%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || ||||| ||||||||||||||||| ||||| || | | | ||| |||||||| Sbjct 3939852 TACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCATG 3939793 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || || ||||| | || || |||| | || | |||| ||||||||| Sbjct 3939792 AAGTCGAAGGGGTTGGTGGACTTGTAAATCTTCTCGTTG-CCAAGAGCGACGAGGAGACG 3939734 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 ||| | |||| |||||||||||| ||| | || |||||| |||| || || Sbjct 3939733 ATCAGCGACGAACTCAATGTACTGCTTCATGAGGTTGGCGTTCATGCCGAGCAGAGCGCA 3939674 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 || || || || | |||| ||| ||||||| ||||| || | |||| || Sbjct 3939673 AGGAAGAGCCTCGGTAAGGAACTCCTGCTCAATGGTGACAGCGTCAGTGATGATGCCGGC 3939614 Query 129967 AATGGTCTCCGTGC---CAGGTCTATTGCGCAA--AGTCTTGAAGAGTTCCACGGCAAAC 130021 |||| |||| ||| || | | ||| | ||| |||| || |||||| Sbjct 3939613 AATGACCTCCTTGCTGGCACGGTTGTTGAGGTGGGAGTGCAGAAGG----CA-GGCAAAG 3939559 Query 130022 TCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 130081 || ||| |||||||||||||| |||||||| || || |||||| |||||| |||||| Sbjct 3939558 TCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATG 3939499 Query 130082 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCC 130141 ||||| |||||||| | |||||| || | ||| | |||||||||||||| ||||| Sbjct 3939498 AGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCAGAGAAGAAGATACCCTCG 3939439 Query 130142 ACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA---AACCAC 130198 || || || |||| |||||||| |||||||| || || | ||| | |||| Sbjct 3939438 ACGGCAGCAAAGGCAACGAGACGCTGAGCAAAGG---TAGAGTTCTTGTCAGAGATCCAC 3939382 Query 130199 TTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGT 130258 |||| ||||| | ||||| || |||||| || | ||||| || || | ||||| Sbjct 3939381 TTCAGGGCCCAGTCGGCCTTCTTGCGGATACAGGGAATGGTCTCAATGGCGTTGAAGAGG 3939322 Query 130259 TCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCA 130318 | | | | || || |||| ||| |||| || || || ||||| || Sbjct 3939321 TATGTGCGCTGGGTAGGCTCCTTGACGTAGGTATCAATAAGCAGGGAGTATGTCTCAGAG 3939262 Query 130319 TGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTAC 130377 |||| | | ||| || | ||| | ||||||| |||| | ||| ||||| || Sbjct 3939261 TGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCAGCGACCCTCGGGAATCTGGAC 3939203 Query 130378 CTCATCTGCAAAATTGTTATTG-ATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAA 130436 ||| | || | || | | | | ||||| |||||| || || || | ||||| | Sbjct 3939202 CTCGT-TGGAGAAGCGCTCGAGAAGGTTCTCGTTAACAATACCGTCAGAGGCGGCAAAGA 3939144 Query 130437 ACGCCAGGATAT---ACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGT 130490 | || || || | | | | | |||||| ||| ||||| | || | ||||| | Sbjct 3939143 AGGCAAGAATGTGGGAGATGAAGTATTTCTCGTCA---TCGTTGAGACGGTTGTTCCAAT 3939087 Query 130491 CGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA-ATTGCTCATTTGAGCCTTC 130549 ||| |||||||| || ||||| | || || || ||||| | || | | |||||| Sbjct 3939086 CGTGCAGATCCTTGGAAAGATCGATTTCTTCGGCTGTCCAGAATGAGGCCTCG-GCCTTC 3939028 Query 130550 TTATAGAGTTCCCAGAGGTGGGGATACTTCAGGGGGAA 130587 || || | | ||||| | | | ||||| | |||||| Sbjct 3939027 TTGTACATCTGCCAGATCTCGTGGTACTTGATGGGGAA 3938990 Score = 154 bits (170), Expect = 2e-32 Identities = 1111/1775 (63%), Gaps = 41/1775 (2%) Strand=Plus/Plus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 ||||||||||||| || |||| | |||||||||||||| || |||||||| | Sbjct 555718 TGAACTGAATGGGAGCGGCAGCAGCCTGGGTACGGAGGTAGTACATGCCGGTCTTGAGAC 555777 Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTC-CATG 117923 | ||||||| | | ||||| || | |||| | ||| || || | |||| Sbjct 555778 CGAGCTTCCAACCGGCGAAGTGCATGCTGGTGATCTTGCCCATGGTGGG-CTCACGCATG 555836 Query 117924 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 117983 || ||||| || || || ||||||||| || || || || | ||| | | Sbjct 555837 TGGATGTTCAAGGACTGAGACTGGTCGATGAAGGCACCACGGTCGGCAGACATCTGGA-- 555894 Query 117984 ACATCCTTCATCTTG---ATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGG 118040 || ||| || | || ||||| |||||| |||| ||| ||| || || | ||| Sbjct 555895 -CAACCTGGCGCTGGGAAATCTCCCAAACAGTCTTGTAAAGGGCCTTGATGTCGGCAGGG 555953 Query 118041 ATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTT 118100 || | ||| || || || ||||| | | | || | | |||||| | | Sbjct 555954 ATGTTGGGGATGTTCTGAATAGATCCGTTCTCAGCAATGATACGGTTCTTCATGGCATCA 556013 Query 118101 GACCAGAGACCAATCTTTTTGAGATCCT----CCACGAGATGCTTATTGACAACAACAAA 118156 ||||| | || || | ||||||| | || || | || ||||| || Sbjct 556014 GACCACAAGCCCATGTCGACAAGATCCTTGAGCAACCAGGGG----TTAACAACCTGGAA 556069 Query 118157 CTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATT 118216 |||||| || | | || | | | || || |||| ||||| ||||| ||||||||||| Sbjct 556070 CTCACCAGCCAAGACACGGCGCTGGTAAATGTTGGAAGTGTAGGGCTCGAAGCACTCATT 556129 Query 118217 GTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACG 118276 ||| || | || || | || || || || |||||||| || | | | ||| || Sbjct 556130 GTTGCCAAGAATCTGCGAGGTAGATGCAGTAGGCATGGGAGCAAGCAACAAAGAGTTGCG 556189 Query 118277 GAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTC 118336 || ||| | ||| | | | |||||||| ||||| || || | | | || Sbjct 556190 GATACCGTGCTCCTTGACCTGCTCCTTGAGGCTATCCCACTCCCAGAGGTCGCTGGGCTT 556249 Query 118337 CCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTC 118396 | | |||||| || || ||||||||||| | || || || || |||| || || Sbjct 556250 GACATTCCACATGTCGAATTGGAGGATACCCTCAGAGGCGGGAGAGCCCTTGAAAGTAGA 556309 Query 118397 ATATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACAT 118453 || || ||||| ||| ||||| | | ||| || || ||| ||||| || || Sbjct 556310 GTAGGGACCCTCTTCCTTGGCCAACTGCACAGAG---GCAGTGACGGCAGCGTGGTAGAT 556366 Query 118454 TGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCA 118513 || || ||||| | |||| | ||||| ||| || || | ||| || Sbjct 556367 GGTCTCGAAAATCTGCTTGTTCAGCTCACGAGCCTCAGGGGACTCGAAGGGGAGACGTAG 556426 Query 118514 CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 118573 | || | || || ||||| || ||||||| ||||| || || || | ||| || Sbjct 556427 AGCGAGGAAGGCGTCAGCAAGACCCTGAACACCGACACCAATGGGACGGTGACGCATGTT 556486 Query 118574 AGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTT 118633 || ||||| || ||||| || || || || | | | || | || Sbjct 556487 GCTGTTACGAGCCTCCTGAACGGGGTAGTGGTTGACGTCAATGATCTTGTTCAAGTTGCG 556546 Query 118634 GGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATT 118693 | ||||||| |||| |||||| ||||| | | | ||| | ||| ||| | | Sbjct 556547 GACAACAACCTGGGTGACTTCATGGAGCTTCTTGAAGTCATACTTGCC---CTCGTTGTA 556603 Query 118694 GACAT---ACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATC 118750 | || | |||||| || | || || || || || |||| | |||||| | Sbjct 556604 GTCAACGAAAGCAGGAAGAGCAAGGGAAGCAAGGTTGCAGACAGCGACCTCATCAGGGGC 556663 Query 118751 AGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTG 118810 | |||||| ||||| || ||||| | ||| || || ||||| ||||||||||| || Sbjct 556664 ACAGTACTCGATAATCTCAGTGCAGAGGTTGGAGCTGCGGATGGTACCCAAGTTCTTCTG 556723 Query 118811 ATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 118870 || ||| ||| || |||||||| |||||| | || | || ||||| || || Sbjct 556724 GTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTG 556783 Query 118871 GGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCT 118929 | || || || || | ||| | | || | || | | || | | | || |||| Sbjct 556784 AGCCTCAAGGATGGCGTACCAAAGCTTCTGAGCCTTG-ATGGTCTTGCGGCCACGGCCCT 556842 Query 118930 CTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTG 118989 | |||||||||| ||| ||||| || || || ||||| | || | || || | Sbjct 556843 CAGCCTCGTACTTCTCGTACAGGGCCTCGAATTCCTCACCGTAGCAATCGGCAAGGCCAG 556902 Query 118990 GTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGA 119049 | || | ||||| | ||| | ||| | || || |||||| ||||||||||| | Sbjct 556903 GGCACTCGTTGGGGCACATGAGGGTCCACTCTCCGTTCTTCTCAACACGCTTCATGAAAA 556962 Query 119050 GGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGAT 119109 | || || |||||||| || ||||||||| || || ||||||| | || |||| Sbjct 556963 GATCGGGAATCCAGAGAGCAAGGAAGAGATCACGGGCACGGACTTCTTCCTTACCATGAT 557022 Query 119110 TGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 119169 | || | || | || || | || ||| |||||||| || || ||||| | |||| Sbjct 557023 TCTTGCGAAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCGA 557082 Query 119170 TTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACAC 119226 | || ||| |||| | |||| || || | || ||| ||| || |||| Sbjct 557083 AGGCACCGGGACGCTTGTTACCACCTTGGTCGACGTAGCGGGCGGTGTTGTTGAAGACAC 557142 Query 119227 GAAGCATTGGAATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATT 119284 | | ||| || |||| ||| | ||| || || || || ||| || ||| || | Sbjct 557143 GCAACATGGGGATGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAAGAGCCT--GT 557200 Query 119285 GGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCA 119344 ||| | || |||| || | |||||| || || ||| ||| ||||| || || Sbjct 557201 GGCACGGATGCGGTGGGCGTTGAGACCAATGCCACCAGCCATCTTGGAGATCATGGCACA 557260 Query 119345 CTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCA 119404 | |||| | |||| || || || || || |||| | | | | |||||| Sbjct 557261 GGTCTTGAGGGTATCGTAAATACCCTCAATGCTATCCTCCTTCATGTCAACCAAGAAGCA 557320 Query 119405 GCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA 119464 | || | || | ||||||||| ||||||||||| || || | || ||| |||| Sbjct 557321 GGAAGAAAGCTGGCACTGGGGTGTACCGGCGTTGAAGAGGGTAGGGGAGGCATGGGTGAA 557380 Query 119465 CATACCT-TGGGACATCTTGTCGTAGGTCTCCAAGAC-GGCGGGAATGTCTTCCCCGTGA 119522 | || | | ||||| || ||||||||| | || || | |||| || || | Sbjct 557381 GA-ACTTGTTAGACATGAGGTTGTAGGTCTCGAGAACACGCTCG-ATGTTGTCACCCCAA 557438 Query 119523 ATACCGATCGAGACCCGCATAAACATGTATTGGGG 119557 ||||||| | ||| | ||| | ||||| ||||| Sbjct 557439 ATACCGACAGCGACTCTCATGATCATGTGCTGGGG 557473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434999008560