Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1 244 1e-59 >seq1 Length=8525130 Score = 244 bits (270), Expect = 1e-59 Identities = 904/1394 (65%), Gaps = 33/1394 (2%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| ||||| | || || |||||||| || || |||| || ||| Sbjct 557473 CCCCAGCACATGATCATGAGAGTCGCTGTCGGTATTTGGGGTGACAACATCGAGCGTGTT 557414 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| ||| || ||||| | | || | |||| || || | || |||||||| Sbjct 557413 CTCGAGACCTACAACCTCATGTCTAACAAGT-TCTTCACCCATGCCTCCCCTACCCTCTT 557355 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| || |||||||| ||| | || |||||| | | | || |||||||| Sbjct 557354 CAACGCCGGTACACCCCAGTGCCAGCTTTCTTCCTGCTTCTTGGTTGACATGAAGGAGGA 557295 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 || | ||||| || | || || | | ||||| ||||| ||| |||||| Sbjct 557294 TAGCATTGAGGGTATTTACGATACCCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGG 557235 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACA 104518 || ||||| | || ||| | | |||| | ||| || ||| || || Sbjct 557234 TGGCATTGGTCTCAACGCCCACCGCATCCGTGCCAC--AGGCTCTTACATCGCTGGTACC 557177 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 || ||| || | ||| | || || ||| | || || || ||| ||| || ||||| Sbjct 557176 AACGGTACCTCCAACGGTGTCATCCCCATGTTGCGTGTCTTCAACAACACCGCCCGCTAC 557117 Query 104579 GTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 104632 || | |||| ||| ||||| || | |||| |||| |||||||| ||| Sbjct 557116 GTCGACCAAGGTGGTAACAAGCGTCCC---GGTGCCTTCGCCATCTACCTTGAGCCCTGG 557060 Query 104633 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGG 104692 ||||| ||| || | ||||||||||| | || || || ||| | || || | || Sbjct 557059 CACGCAGATGTCTTTGAGTTCCTTGACCTTCGCAAGAATCATGGTAAGGAAGAAGTCCGT 557000 Query 104693 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752 ||| ||||||||| |||||||||||||| ||||| ||||||||| | |||||| || Sbjct 556999 GCCCGTGATCTCTTCCTTGCTCTCTGGATTCCCGATCTTTTCATGAAGCGTGTTGAGAAG 556940 Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812 | || | ||| | ||| | || || || || ||||| || ||||| | ||| Sbjct 556939 AACGGAGAGTGGACCCTCATGTGCCCCAACGAGTGCCCTGGCCTTGCCGATTGCTACGGT 556880 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG-GGCGACTGCGACGGT 104871 ||||| || || ||||| ||| |||||||||| || || || ||| | ||| | Sbjct 556879 GAGGAATTCGAGGCCCTGTACGAGAAGTACGAGGCTGAGGGCCGTGGCCGC-AAGACCAT 556821 Query 104872 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930 | || | || | | ||| | || || || || |||| ||||||||||||| || | Sbjct 556820 -CAAGGCTCAGAAGCTTTGGTACGCCATCCTTGAGGCTCAGACCGAGACTGGTAACCCCT 556762 Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990 |||||| ||||| ||| ||| |||| ||||| || || ||||| |||||| ||| Sbjct 556761 TCATGCTCTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACTTGGGTACCATCC 556702 Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050 || ||||| ||||| || || || | || | | | |||||| ||||| | Sbjct 556701 GCAGCTCCAACCTCTGCACTGAGATTATCGAGTACTGTGCCCCTGATGAGGTCGCTGTCT 556642 Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA--TTTGA 105108 | ||||| || || | ||||| || | || || | | | || | | || | ||| Sbjct 556641 GCAACCTTGCTTCCCTTGCTCTTCCTGCTTTCGTTGA-CTACA-ACGAGGGCAAGTATGA 556584 Query 105109 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGA 105168 | | || ||||| ||||| || | ||| | ||| | |||| | ||||| Sbjct 556583 CTTCAAGAAGCTCCATGAAGTCACCCAGGTTGTTGTCCGCAACTTGAACAAGATCATTGA 556524 Query 105169 TAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGG 105228 || ||||||||| || |||||||| || ||| | |||||||| ||||| Sbjct 556523 CGTCAACCACTACCCCGTTCAGGAGGCTCGTAACAGCAACATGCGTCACCGTCCCATTGG 556464 Query 105229 TCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTTGATTC 105285 | |||||||||||||||| || || | ||| | ||| ||| || | || || || Sbjct 556463 TGTCGGTGTTCAGGGTCTTGCTGACGCCTTCCTCGCTCTACGTCTCC---CCTTCGAGTC 556407 Query 105286 CGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA 105345 | || || || | || || || || |||||||| || ||||| || | Sbjct 556406 CCCTGAGGCTCGTGAGCTGAACAAGCAGATTTTCGAGACCATCTACCACGCTGCCGTCAC 556347 Query 105346 GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 105405 || | ||||||| ||| || ||||| || || || |||| ||||| || Sbjct 556346 TGCCTCTGTGCAGTTGGCCAAGGAAGAGGGTCCCTACTCTACTTTCAAGGGCTCTCCCGC 556287 Query 105406 TTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGACT 105464 || | || | || ||||| || |||| |||| || | || ||| | || || | Sbjct 556286 CTCTGAGGGTATCCTCCAATTCGACATGT-GGAATGTCAAGCCCAGCGACCTCTGGGAGT 556228 Query 105465 GGGA-AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCT 105523 |||| ||| |||||||| | |||||||| | ||| | || ||| | | | | ||| Sbjct 556227 GGGATAGC-CTCAAGGAGCAGGTCAAGGAGCACGGTATCCGCAACTCTTTGTTGCTTGCT 556169 Query 105524 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTAC 105583 || ||||| || || || ||| | || || | || || ||||| ||||| || |||||| Sbjct 556168 CCCATGCCTACTGCATCTACCTCGCAGATTCTTGGCAACAATGAGTGCTTCGAGCCCTAC 556109 Query 105584 ACGACGAACATCTA 105597 || | ||||| || Sbjct 556108 ACTTCCAACATTTA 556095 Score = 168 bits (186), Expect = 8e-37 Identities = 185/245 (76%), Gaps = 6/245 (2%) Strand=Plus/Plus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 ||||| | ||||| | || |||| ||||| | ||||| || || ||||| ||||| Sbjct 3939323 CTCTTCAACGCCATTGAGACCATTCCCTGTATCCGCAAGAAGGCCGACTGGGCCCTGAAG 3939382 Query 94774 TGGTT---TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTT 94830 ||| | ||| | || || | |||||||| |||| ||| | || ||||| || Sbjct 3939383 TGGATCTCTGACAAGAACTC---TACCTTTGCTCAGCGTCTCGTTGCCTTTGCTGCCGTC 3939439 Query 94831 GAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTC 94890 ||||||||||||||||||||| |||| | | || | |||||||||||||| |||||| Sbjct 3939440 GAGGGTATCTTCTTCTCTGGTGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTC 3939499 Query 94891 ATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAG 94950 ||||| ||||| ||||||||||||||| ||||||||||||||||| || ||| || Sbjct 3939500 ATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACCGAC 3939559 Query 94951 TTTGC 94955 ||||| Sbjct 3939560 TTTGC 3939564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260610440240