Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq1 244 1e-59
>seq1
Length=8525130
Score = 244 bits (270), Expect = 1e-59
Identities = 904/1394 (65%), Gaps = 33/1394 (2%)
Strand=Plus/Minus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| ||||| ||||| | || || |||||||| || || |||| || |||
Sbjct 557473 CCCCAGCACATGATCATGAGAGTCGCTGTCGGTATTTGGGGTGACAACATCGAGCGTGTT 557414
Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
| ||||| ||| || ||||| | | || | |||| || || | || ||||||||
Sbjct 557413 CTCGAGACCTACAACCTCATGTCTAACAAGT-TCTTCACCCATGCCTCCCCTACCCTCTT 557355
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
||| || |||||||| ||| | || |||||| | | | || ||||||||
Sbjct 557354 CAACGCCGGTACACCCCAGTGCCAGCTTTCTTCCTGCTTCTTGGTTGACATGAAGGAGGA 557295
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
|| | ||||| || | || || | | ||||| ||||| ||| ||||||
Sbjct 557294 TAGCATTGAGGGTATTTACGATACCCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGG 557235
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACA 104518
|| ||||| | || ||| | | |||| | ||| || ||| || ||
Sbjct 557234 TGGCATTGGTCTCAACGCCCACCGCATCCGTGCCAC--AGGCTCTTACATCGCTGGTACC 557177
Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578
|| ||| || | ||| | || || ||| | || || || ||| ||| || |||||
Sbjct 557176 AACGGTACCTCCAACGGTGTCATCCCCATGTTGCGTGTCTTCAACAACACCGCCCGCTAC 557117
Query 104579 GTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 104632
|| | |||| ||| ||||| || | |||| |||| |||||||| |||
Sbjct 557116 GTCGACCAAGGTGGTAACAAGCGTCCC---GGTGCCTTCGCCATCTACCTTGAGCCCTGG 557060
Query 104633 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGG 104692
||||| ||| || | ||||||||||| | || || || ||| | || || | ||
Sbjct 557059 CACGCAGATGTCTTTGAGTTCCTTGACCTTCGCAAGAATCATGGTAAGGAAGAAGTCCGT 557000
Query 104693 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752
||| ||||||||| |||||||||||||| ||||| ||||||||| | |||||| ||
Sbjct 556999 GCCCGTGATCTCTTCCTTGCTCTCTGGATTCCCGATCTTTTCATGAAGCGTGTTGAGAAG 556940
Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812
| || | ||| | ||| | || || || || ||||| || ||||| | |||
Sbjct 556939 AACGGAGAGTGGACCCTCATGTGCCCCAACGAGTGCCCTGGCCTTGCCGATTGCTACGGT 556880
Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG-GGCGACTGCGACGGT 104871
||||| || || ||||| ||| |||||||||| || || || ||| | ||| |
Sbjct 556879 GAGGAATTCGAGGCCCTGTACGAGAAGTACGAGGCTGAGGGCCGTGGCCGC-AAGACCAT 556821
Query 104872 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930
| || | || | | ||| | || || || || |||| ||||||||||||| || |
Sbjct 556820 -CAAGGCTCAGAAGCTTTGGTACGCCATCCTTGAGGCTCAGACCGAGACTGGTAACCCCT 556762
Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990
|||||| ||||| ||| ||| |||| ||||| || || ||||| |||||| |||
Sbjct 556761 TCATGCTCTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACTTGGGTACCATCC 556702
Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050
|| ||||| ||||| || || || | || | | | |||||| ||||| |
Sbjct 556701 GCAGCTCCAACCTCTGCACTGAGATTATCGAGTACTGTGCCCCTGATGAGGTCGCTGTCT 556642
Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA--TTTGA 105108
| ||||| || || | ||||| || | || || | | | || | | || | |||
Sbjct 556641 GCAACCTTGCTTCCCTTGCTCTTCCTGCTTTCGTTGA-CTACA-ACGAGGGCAAGTATGA 556584
Query 105109 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGA 105168
| | || ||||| ||||| || | ||| | ||| | |||| | |||||
Sbjct 556583 CTTCAAGAAGCTCCATGAAGTCACCCAGGTTGTTGTCCGCAACTTGAACAAGATCATTGA 556524
Query 105169 TAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGG 105228
|| ||||||||| || |||||||| || ||| | |||||||| |||||
Sbjct 556523 CGTCAACCACTACCCCGTTCAGGAGGCTCGTAACAGCAACATGCGTCACCGTCCCATTGG 556464
Query 105229 TCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTTGATTC 105285
| |||||||||||||||| || || | ||| | ||| ||| || | || || ||
Sbjct 556463 TGTCGGTGTTCAGGGTCTTGCTGACGCCTTCCTCGCTCTACGTCTCC---CCTTCGAGTC 556407
Query 105286 CGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA 105345
| || || || | || || || || |||||||| || ||||| || |
Sbjct 556406 CCCTGAGGCTCGTGAGCTGAACAAGCAGATTTTCGAGACCATCTACCACGCTGCCGTCAC 556347
Query 105346 GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 105405
|| | ||||||| ||| || ||||| || || || |||| ||||| ||
Sbjct 556346 TGCCTCTGTGCAGTTGGCCAAGGAAGAGGGTCCCTACTCTACTTTCAAGGGCTCTCCCGC 556287
Query 105406 TTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGACT 105464
|| | || | || ||||| || |||| |||| || | || ||| | || || |
Sbjct 556286 CTCTGAGGGTATCCTCCAATTCGACATGT-GGAATGTCAAGCCCAGCGACCTCTGGGAGT 556228
Query 105465 GGGA-AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCT 105523
|||| ||| |||||||| | |||||||| | ||| | || ||| | | | | |||
Sbjct 556227 GGGATAGC-CTCAAGGAGCAGGTCAAGGAGCACGGTATCCGCAACTCTTTGTTGCTTGCT 556169
Query 105524 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTAC 105583
|| ||||| || || || ||| | || || | || || ||||| ||||| || ||||||
Sbjct 556168 CCCATGCCTACTGCATCTACCTCGCAGATTCTTGGCAACAATGAGTGCTTCGAGCCCTAC 556109
Query 105584 ACGACGAACATCTA 105597
|| | ||||| ||
Sbjct 556108 ACTTCCAACATTTA 556095
Score = 168 bits (186), Expect = 8e-37
Identities = 185/245 (76%), Gaps = 6/245 (2%)
Strand=Plus/Plus
Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773
||||| | ||||| | || |||| ||||| | ||||| || || ||||| |||||
Sbjct 3939323 CTCTTCAACGCCATTGAGACCATTCCCTGTATCCGCAAGAAGGCCGACTGGGCCCTGAAG 3939382
Query 94774 TGGTT---TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTT 94830
||| | ||| | || || | |||||||| |||| ||| | || ||||| ||
Sbjct 3939383 TGGATCTCTGACAAGAACTC---TACCTTTGCTCAGCGTCTCGTTGCCTTTGCTGCCGTC 3939439
Query 94831 GAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTC 94890
||||||||||||||||||||| |||| | | || | |||||||||||||| ||||||
Sbjct 3939440 GAGGGTATCTTCTTCTCTGGTGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTC 3939499
Query 94891 ATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAG 94950
||||| ||||| ||||||||||||||| ||||||||||||||||| || ||| ||
Sbjct 3939500 ATGCCCGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTTCACACCGAC 3939559
Query 94951 TTTGC 94955
|||||
Sbjct 3939560 TTTGC 3939564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260610440240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |