Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1 251 2e-61 seq3 161 3e-34 seq7 132 1e-25 seq2 107 6e-18 >seq1 Length=8525130 Score = 251 bits (278), Expect = 2e-61 Identities = 945/1472 (64%), Gaps = 24/1472 (2%) Strand=Plus/Minus Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAA 349264 || |||||||| ||||| || || |||||||| | ||| | | | || ||| || Sbjct 1960583 GGTATCGATTTGGGTACCACCTACTCTTGTGTCGGTGTCTTCCGTGAAGACCGTTGCGAC 1960524 Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACT 349324 || || || || || || |||||| | || || || || | ||| || || ||||| || Sbjct 1960523 ATCATCGCCAACGACCAGGGTAACCGTACCACTCCTTCTTTCGTCGCTTTCACCGACACC 1960464 Query 349325 GAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTT 349384 |||||| ||||||||||| | || || || || | || || || || || || || Sbjct 1960463 GAGCGTCTGATTGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCCAACAACACCGTC 1960404 Query 349385 TTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACAATCTGATC 349442 || || || ||||| || ||||| | | || || || | | | || | ||| Sbjct 1960403 TTCGACGCCAAGCGTCTCATTGGCCGCAAGTTCTCCGATGCTGAGGTCCAGG--CCGATA 1960346 Query 349443 TAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTG 349502 | || || || || || | || || | ||| |||| || || ||| | ||||||| Sbjct 1960345 TGAAGCACTTCCCCTTCAAGGTCATTG-ACAAG--GGTGGCAAGCCCATTGTCGAGGTTG 1960289 Query 349503 AATATAAAGGTGA--ACAAAAACAATTTTTACCC--GAAGAAATTTCATCAATGGTTTTA 349558 | | || || || |||| | | || |||| || ||||| || || ||| | | Sbjct 1960288 AGTTCAAGGGCGAGAACAAGACC----TTCACCCCTGAGGAAATCTCTTCCATGATCCTC 1960233 Query 349559 GTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATT 349618 | || ||| || | |||||| || || | |||| || || | | ||||| || Sbjct 1960232 ATCAAGATGCGCGAGACTGCTGAGGCTTACCTCGGTGGCACCGTCAACAACGCTGTCATC 1960173 Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678 ||||| || ||||| || || || | |||||| || || || ||||| || |||| Sbjct 1960172 ACTGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGATGCCGGTCTCATT 1960113 Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738 || || | || || || | || || || || || ||||| || || ||||| || || Sbjct 1960112 GCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCTACTGCCGCTGCCATTGCCTACGGT 1960053 Query 349739 CTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACT 349798 ||||| || | || | || || | || || || ||| | ||||||||||| Sbjct 1960052 CTTGACAAGAAGATCTCCGGCGAGCGCAACGTCCTCATCTTCGATCTTGGTGGTGGTACC 1959993 Query 349799 TTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGT 349858 || ||||| || || || || |||| ||||| || ||||| || || | ||||||||| Sbjct 1959992 TTCGATGTTTCTCTCCTCACCATTGAGGAGGGTATCTTTGAGGTCAAGTCCACTGCTGGT 1959933 Query 349859 GATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAA 349918 || || || | ||||| ||||| || || || ||||||||| || |||| ||| ||| Sbjct 1959932 GACACCCACTTGGGTGGTGAAGACTTCGACAACCGTCTCGTTAACCACTTTGCTAACGAA 1959873 Query 349919 TTTAAGCGTCA-AGCTAAAATTGATATTGGAGATAATCCTA--GAGCAATGCGTCGCCTA 349975 || || || | ||| |||| | || || || | | | | || ||||| || || Sbjct 1959872 TTCAAACGCAAGAGCAAAAA---AGATCTGACATCAAACAACCGTGCCATGCGCCGTCTC 1959816 Query 349976 AGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAA 350035 | ||||| || || ||||| |||||| || | || || | | || ||||| ||||| Sbjct 1959815 CGCACTGCTTGCGAGCGTGCCAAGCGTACCCTTTCTTCCTCCGCTCAGACCTCCATTGAG 1959756 Query 350036 ATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAA 350095 || || ||||| || || | || |||| | || || || |||||||| || ||| Sbjct 1959755 ATCGACTCTCTCTTCGAGGGTATCGACTTCTACACCTCCATCACCCGTGCTCGTTTCGAA 1959696 Query 350096 GAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGAT 350155 || | || ||| || || | | || || | || || || || | || Sbjct 1959695 GAGCTTTGCCAGGACCTCTTCCGCTCTACCATCCAGCCCGTCGACCGTGTCCTTGCTGAC 1959636 Query 350156 GCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATT 350215 || || || ||| | ||| | | || | ||| | || |||||||| || ||||| Sbjct 1959635 GCCAAGATCGACAAGAGCCAGGTCCACGAGATTGTTCTCGTCGGTGGTTCCACCCGTATC 1959576 Query 350216 CCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATT 350275 || | || || | | | || | || || ||||| || || | || || Sbjct 1959575 CCCCGCATCCAGAAGCTCATTACCGACTACTTCAACGGCAAGGAGCCCAACAAGTCCATC 1959516 Query 350276 AATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAAT 350335 || || ||||| |||||||| || |||||||| || ||||| |||| | ||||| | Sbjct 1959515 AACCCCGATGAGGCTGTTGCTTACGGTGCTGCCGTCCAGGCTGCTATCCTGTCTGGTGAC 1959456 Query 350336 AAGAGTTCTA---AAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGA 350392 | | || | | | || | | || || ||||| |||| || || || || Sbjct 1959455 ACCACCTCCACCTCCACCAAGGAAATCCTCCTCCTTGATGTCGCTCCCCTCTCTCTCGGT 1959396 Query 350393 TTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACA 350452 | || ||| |||||| | ||||| || || || | || | || || || || Sbjct 1959395 ATCGAGACTGCTGGTGGTATGATGACCAAGCTGATCCCCCGCAACACCACCGTTCCCACC 1959336 Query 350453 AAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTA 350512 || |||||| | || ||||| || | || || ||||| | || || || || Sbjct 1959335 AAGAAGTCCGAGGTCTTCTCTACCTTCTCTGACAACCAGCCCGGTGTCCTTATCCAGGTC 1959276 Query 350513 TTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGT 350572 | || ||||| ||| ||||| || || || || || || | || || | | Sbjct 1959275 TACGAGGGTGAGCGTCAGCGCACCAAGGACAACAACTTGCTCGGCAAGTTCGAGCTCACT 1959216 Query 350573 GAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCA 350632 | || || || || | || ||||| |||||||| ||| | |||||| ||||| | Sbjct 1959215 GGCATCCCCCCTGCCCCCCGTGGTGTTCCCCAGATTGAGGTCACCTTCGATGTTGATGCC 1959156 Query 350633 AATGGTATTTTAAATGTTACCGCAGTTGAAAA 350664 || ||||| | || || |||| || || || Sbjct 1959155 AACGGTATCATGAACGTCTCCGCCGTCGAGAA 1959124 >seq3 Length=4610873 Score = 161 bits (178), Expect = 3e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || ||||| ||||| ||| || ||||| || || ||||| | || || |||||| Sbjct 3673207 AGGACGAGATGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCT 3673266 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 ||||| || || ||||||||||| ||||||||||| ||||||||||| || || |||||| Sbjct 3673267 TCAAGCTGCTTACCAGCAAAGATAAGACGTTGCTGGTCAGGAGGAATACCCTCCTTATCC 3673326 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 ||||| || | || || || || || | |||||| | ||||| || | ||| | ||| Sbjct 3673327 TGAATCTTCGACTTGACGTTGTCGATGGTATCAGAAGACTCAACCTCCAATGTGATCGTC 3673386 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || || || || ||||||||||| Sbjct 3673387 TTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 3673418 Score = 145 bits (160), Expect = 2e-29 Identities = 173/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | ||||| |||||||| ||||| || || || || || | Sbjct 3673640 TTTGCATACCACCACGGAGGCGGAGAACGAGATGAAGGGTAGATTCCTTCTGGATGTTGT 3673699 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || ||||||||||| || || || ||||| || || || ||||| | Sbjct 3673700 AGTCGGAAAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAAATCAGGCGCTGCTGGT 3673759 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 ||||||| || || || || ||||| || || | || || || ||||| | || || | Sbjct 3673760 CAGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATAGTGTCGGAAG 3673819 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || || |||| ||||||||||| | || || || || |||||||| Sbjct 3673820 ACTCAACCTCGAGGGTAATGGTCTTTCCGGTCAAAGTCTTGACGAAGATCTGCAT 3673874 Score = 132 bits (146), Expect = 1e-25 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | || ||||||||||| || ||||| || || || Sbjct 3673416 CATACCACCACGGAGACGCAGCACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAGTC 3673475 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | || || || || || || || || || |||||||| ||||| ||||||||||| Sbjct 3673476 GCTCAGAGTGCGACCGTCCTCGAGCTGCTTACCGGCAAAGATAAGACGCTGCTGATCAGG 3673535 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || ||||| || || || | || ||||| || || | || |||| || Sbjct 3673536 AGGGATACCCTCCTTATCTTGGATCTTTGACTTGACATTGTCGATTGTGTCCGATGACTC 3673595 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||| | ||||| ||||| || || || || || ||||| || ||||| Sbjct 3673596 AACTTCTAATGTAATAGTCTTGCCAGTAAGAGTCTTGACAAAGATTTGCAT 3673646 Score = 116 bits (128), Expect = 1e-20 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || || || ||| || ||||| || ||||| Sbjct 3673872 CATACCACCACGAAGGCGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAATC 3673931 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || ||||| || || || || ||||| || || || || ||||| ||||| Sbjct 3673932 AGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCAGG 3673991 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||||| || || |||||||| || | || || || ||||| | || || | || Sbjct 3673992 GGGAATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTC 3674051 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGT 140713 ||| || || |||| ||||| ||||| Sbjct 3674052 AACCTCGAGGGTAATGGTCTTGCCGGT 3674078 >seq7 Length=1200748 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || ||||| || ||||| ||||| || || || || || || || Sbjct 1041566 ACCACCACGCAGGCGGAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGA 1041507 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || ||||| || || || || ||||| ||||| || || ||||| ||||| || Sbjct 1041506 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGG 1041447 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 || || || |||||||| || || | || ||||| ||||| | || || | || || Sbjct 1041446 GATACCCTCCTTATCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAAGACTCCAC 1041387 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | |||||||| || || || || || ||||||||||| Sbjct 1041386 CTCAAGGGTGATCGTCTTTCCCGTAAGGGTCTTGACGAAAATCTGCAT 1041339 >seq2 Length=6006343 Score = 107 bits (118), Expect = 6e-18 Identities = 111/145 (77%), Gaps = 3/145 (2%) Strand=Plus/Plus Query 377446 ATTTCTTCAATGCGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAG 377505 ||||| | || || || ||||| | ||||| ||| || || | ||||||||||| Sbjct 4336825 ATTTCCTTAAGACGGGGAACACCGAGGGTAACGTTC---TTGGACGACACACCAGCAAAA 4336881 Query 377506 TGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACG 377565 |||||||| || || || | ||||||| |||||||||||| ||||| || || | || Sbjct 4336882 TGGAAAGTGTTCAGTGTCATCTGAGTAGCGGGCTCACCAATAGACTGGGCAGCCAAGACA 4336941 Query 377566 CCAACCATTTCTCCAGGATTGACAA 377590 ||||||||||| ||||| ||||||| Sbjct 4336942 CCAACCATTTCACCAGGGTTGACAA 4336966 Score = 91.5 bits (100), Expect = 4e-13 Identities = 169/248 (68%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 378199 AAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGTTTGACTAGTTTTAACT 378258 || ||||| | || || | ||||| || || |||||||||| |||||||||| Sbjct 4337596 AAGTCTTCCAGAGCCTTCACCAGTCGACGCTGGATGTAACCAGTTTCTGCAGTTTTAACT 4337655 Query 378259 GCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAATTCAGTAGGAGTA 378318 ||||||||||| | ||| | | ||| |||| || |||||||| || || | ||||| Sbjct 4337656 GCAGTATCAATGAGACCTTCTCTACCGGCCATGGCGTGGAAGAAGAACTCGGATGGAGTG 4337715 Query 378319 AGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAATCATCATATTTT 378378 || |||| | | || |||||| || || | || | || || | ||||| ||| Sbjct 4337716 AGACCACGGAGGTACGAGTTCTCAACGAAACCACGAGCTTCGGGAGAGTAATCATCCTTT 4337775 Query 378379 GTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTCGTTTTCCATCAACATTC 378438 || |||| || | || | | || || ||| | ||||| || ||||| || ||| | Sbjct 4337776 GTGAAATGGGGAAGAGTTCTGTACTTGAAACCAAAGGGAATACGCTTTCCTTCGACAATT 4337835 Query 378439 TGTTGACC 378446 || ||||| Sbjct 4337836 TGCTGACC 4337843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253895230878