Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq1 251 2e-61
seq3 161 3e-34
seq7 132 1e-25
seq2 107 6e-18
>seq1
Length=8525130
Score = 251 bits (278), Expect = 2e-61
Identities = 945/1472 (64%), Gaps = 24/1472 (2%)
Strand=Plus/Minus
Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAA 349264
|| |||||||| ||||| || || |||||||| | ||| | | | || ||| ||
Sbjct 1960583 GGTATCGATTTGGGTACCACCTACTCTTGTGTCGGTGTCTTCCGTGAAGACCGTTGCGAC 1960524
Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACT 349324
|| || || || || || |||||| | || || || || | ||| || || ||||| ||
Sbjct 1960523 ATCATCGCCAACGACCAGGGTAACCGTACCACTCCTTCTTTCGTCGCTTTCACCGACACC 1960464
Query 349325 GAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTT 349384
|||||| ||||||||||| | || || || || | || || || || || || ||
Sbjct 1960463 GAGCGTCTGATTGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCCAACAACACCGTC 1960404
Query 349385 TTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACAATCTGATC 349442
|| || || ||||| || ||||| | | || || || | | | || | |||
Sbjct 1960403 TTCGACGCCAAGCGTCTCATTGGCCGCAAGTTCTCCGATGCTGAGGTCCAGG--CCGATA 1960346
Query 349443 TAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTG 349502
| || || || || || | || || | ||| |||| || || ||| | |||||||
Sbjct 1960345 TGAAGCACTTCCCCTTCAAGGTCATTG-ACAAG--GGTGGCAAGCCCATTGTCGAGGTTG 1960289
Query 349503 AATATAAAGGTGA--ACAAAAACAATTTTTACCC--GAAGAAATTTCATCAATGGTTTTA 349558
| | || || || |||| | | || |||| || ||||| || || ||| | |
Sbjct 1960288 AGTTCAAGGGCGAGAACAAGACC----TTCACCCCTGAGGAAATCTCTTCCATGATCCTC 1960233
Query 349559 GTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATT 349618
| || ||| || | |||||| || || | |||| || || | | ||||| ||
Sbjct 1960232 ATCAAGATGCGCGAGACTGCTGAGGCTTACCTCGGTGGCACCGTCAACAACGCTGTCATC 1960173
Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678
||||| || ||||| || || || | |||||| || || || ||||| || ||||
Sbjct 1960172 ACTGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGATGCCGGTCTCATT 1960113
Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738
|| || | || || || | || || || || || ||||| || || ||||| || ||
Sbjct 1960112 GCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCTACTGCCGCTGCCATTGCCTACGGT 1960053
Query 349739 CTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACT 349798
||||| || | || | || || | || || || ||| | |||||||||||
Sbjct 1960052 CTTGACAAGAAGATCTCCGGCGAGCGCAACGTCCTCATCTTCGATCTTGGTGGTGGTACC 1959993
Query 349799 TTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGT 349858
|| ||||| || || || || |||| ||||| || ||||| || || | |||||||||
Sbjct 1959992 TTCGATGTTTCTCTCCTCACCATTGAGGAGGGTATCTTTGAGGTCAAGTCCACTGCTGGT 1959933
Query 349859 GATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAA 349918
|| || || | ||||| ||||| || || || ||||||||| || |||| ||| |||
Sbjct 1959932 GACACCCACTTGGGTGGTGAAGACTTCGACAACCGTCTCGTTAACCACTTTGCTAACGAA 1959873
Query 349919 TTTAAGCGTCA-AGCTAAAATTGATATTGGAGATAATCCTA--GAGCAATGCGTCGCCTA 349975
|| || || | ||| |||| | || || || | | | | || ||||| || ||
Sbjct 1959872 TTCAAACGCAAGAGCAAAAA---AGATCTGACATCAAACAACCGTGCCATGCGCCGTCTC 1959816
Query 349976 AGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAA 350035
| ||||| || || ||||| |||||| || | || || | | || ||||| |||||
Sbjct 1959815 CGCACTGCTTGCGAGCGTGCCAAGCGTACCCTTTCTTCCTCCGCTCAGACCTCCATTGAG 1959756
Query 350036 ATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAA 350095
|| || ||||| || || | || |||| | || || || |||||||| || |||
Sbjct 1959755 ATCGACTCTCTCTTCGAGGGTATCGACTTCTACACCTCCATCACCCGTGCTCGTTTCGAA 1959696
Query 350096 GAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGAT 350155
|| | || ||| || || | | || || | || || || || | ||
Sbjct 1959695 GAGCTTTGCCAGGACCTCTTCCGCTCTACCATCCAGCCCGTCGACCGTGTCCTTGCTGAC 1959636
Query 350156 GCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATT 350215
|| || || ||| | ||| | | || | ||| | || |||||||| || |||||
Sbjct 1959635 GCCAAGATCGACAAGAGCCAGGTCCACGAGATTGTTCTCGTCGGTGGTTCCACCCGTATC 1959576
Query 350216 CCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATT 350275
|| | || || | | | || | || || ||||| || || | || ||
Sbjct 1959575 CCCCGCATCCAGAAGCTCATTACCGACTACTTCAACGGCAAGGAGCCCAACAAGTCCATC 1959516
Query 350276 AATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAAT 350335
|| || ||||| |||||||| || |||||||| || ||||| |||| | ||||| |
Sbjct 1959515 AACCCCGATGAGGCTGTTGCTTACGGTGCTGCCGTCCAGGCTGCTATCCTGTCTGGTGAC 1959456
Query 350336 AAGAGTTCTA---AAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGA 350392
| | || | | | || | | || || ||||| |||| || || || ||
Sbjct 1959455 ACCACCTCCACCTCCACCAAGGAAATCCTCCTCCTTGATGTCGCTCCCCTCTCTCTCGGT 1959396
Query 350393 TTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACA 350452
| || ||| |||||| | ||||| || || || | || | || || || ||
Sbjct 1959395 ATCGAGACTGCTGGTGGTATGATGACCAAGCTGATCCCCCGCAACACCACCGTTCCCACC 1959336
Query 350453 AAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTA 350512
|| |||||| | || ||||| || | || || ||||| | || || || ||
Sbjct 1959335 AAGAAGTCCGAGGTCTTCTCTACCTTCTCTGACAACCAGCCCGGTGTCCTTATCCAGGTC 1959276
Query 350513 TTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGT 350572
| || ||||| ||| ||||| || || || || || || | || || | |
Sbjct 1959275 TACGAGGGTGAGCGTCAGCGCACCAAGGACAACAACTTGCTCGGCAAGTTCGAGCTCACT 1959216
Query 350573 GAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCA 350632
| || || || || | || ||||| |||||||| ||| | |||||| ||||| |
Sbjct 1959215 GGCATCCCCCCTGCCCCCCGTGGTGTTCCCCAGATTGAGGTCACCTTCGATGTTGATGCC 1959156
Query 350633 AATGGTATTTTAAATGTTACCGCAGTTGAAAA 350664
|| ||||| | || || |||| || || ||
Sbjct 1959155 AACGGTATCATGAACGTCTCCGCCGTCGAGAA 1959124
>seq3
Length=4610873
Score = 161 bits (178), Expect = 3e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
|| || ||||| ||||| ||| || ||||| || || ||||| | || || ||||||
Sbjct 3673207 AGGACGAGATGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCT 3673266
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
||||| || || ||||||||||| ||||||||||| ||||||||||| || || ||||||
Sbjct 3673267 TCAAGCTGCTTACCAGCAAAGATAAGACGTTGCTGGTCAGGAGGAATACCCTCCTTATCC 3673326
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
||||| || | || || || || || | |||||| | ||||| || | ||| | |||
Sbjct 3673327 TGAATCTTCGACTTGACGTTGTCGATGGTATCAGAAGACTCAACCTCCAATGTGATCGTC 3673386
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| ||||| || || || || |||||||||||
Sbjct 3673387 TTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 3673418
Score = 145 bits (160), Expect = 2e-29
Identities = 173/235 (74%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | ||||| |||||||| ||||| || || || || || |
Sbjct 3673640 TTTGCATACCACCACGGAGGCGGAGAACGAGATGAAGGGTAGATTCCTTCTGGATGTTGT 3673699
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | || || ||||||||||| || || || ||||| || || || ||||| |
Sbjct 3673700 AGTCGGAAAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAAATCAGGCGCTGCTGGT 3673759
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
||||||| || || || || ||||| || || | || || || ||||| | || || |
Sbjct 3673760 CAGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATAGTGTCGGAAG 3673819
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| || || |||| ||||||||||| | || || || || ||||||||
Sbjct 3673820 ACTCAACCTCGAGGGTAATGGTCTTTCCGGTCAAAGTCTTGACGAAGATCTGCAT 3673874
Score = 132 bits (146), Expect = 1e-25
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || | || ||||||||||| || ||||| || || ||
Sbjct 3673416 CATACCACCACGGAGACGCAGCACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAGTC 3673475
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
| || || || || || || || || || |||||||| ||||| |||||||||||
Sbjct 3673476 GCTCAGAGTGCGACCGTCCTCGAGCTGCTTACCGGCAAAGATAAGACGCTGCTGATCAGG 3673535
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||| || || || ||||| || || || | || ||||| || || | || |||| ||
Sbjct 3673536 AGGGATACCCTCCTTATCTTGGATCTTTGACTTGACATTGTCGATTGTGTCCGATGACTC 3673595
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|||||| | ||||| ||||| || || || || || ||||| || |||||
Sbjct 3673596 AACTTCTAATGTAATAGTCTTGCCAGTAAGAGTCTTGACAAAGATTTGCAT 3673646
Score = 116 bits (128), Expect = 1e-20
Identities = 150/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || || || || || ||| || ||||| || |||||
Sbjct 3673872 CATACCACCACGAAGGCGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAATC 3673931
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| | || || ||||| || || || || ||||| || || || || ||||| |||||
Sbjct 3673932 AGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCAGG 3673991
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|||||||| || || |||||||| || | || || || ||||| | || || | ||
Sbjct 3673992 GGGAATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTC 3674051
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGT 140713
||| || || |||| ||||| |||||
Sbjct 3674052 AACCTCGAGGGTAATGGTCTTGCCGGT 3674078
>seq7
Length=1200748
Score = 132 bits (146), Expect = 1e-25
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569
||||||||| | | || ||||| || ||||| ||||| || || || || || || ||
Sbjct 1041566 ACCACCACGCAGGCGGAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGA 1041507
Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629
| || || ||||| || || || || ||||| ||||| || || ||||| ||||| ||
Sbjct 1041506 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGG 1041447
Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689
|| || || |||||||| || || | || ||||| ||||| | || || | || ||
Sbjct 1041446 GATACCCTCCTTATCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAAGACTCCAC 1041387
Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| || | |||||||| || || || || || |||||||||||
Sbjct 1041386 CTCAAGGGTGATCGTCTTTCCCGTAAGGGTCTTGACGAAAATCTGCAT 1041339
>seq2
Length=6006343
Score = 107 bits (118), Expect = 6e-18
Identities = 111/145 (77%), Gaps = 3/145 (2%)
Strand=Plus/Plus
Query 377446 ATTTCTTCAATGCGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAG 377505
||||| | || || || ||||| | ||||| ||| || || | |||||||||||
Sbjct 4336825 ATTTCCTTAAGACGGGGAACACCGAGGGTAACGTTC---TTGGACGACACACCAGCAAAA 4336881
Query 377506 TGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACG 377565
|||||||| || || || | ||||||| |||||||||||| ||||| || || | ||
Sbjct 4336882 TGGAAAGTGTTCAGTGTCATCTGAGTAGCGGGCTCACCAATAGACTGGGCAGCCAAGACA 4336941
Query 377566 CCAACCATTTCTCCAGGATTGACAA 377590
||||||||||| ||||| |||||||
Sbjct 4336942 CCAACCATTTCACCAGGGTTGACAA 4336966
Score = 91.5 bits (100), Expect = 4e-13
Identities = 169/248 (68%), Gaps = 0/248 (0%)
Strand=Plus/Plus
Query 378199 AAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGTTTGACTAGTTTTAACT 378258
|| ||||| | || || | ||||| || || |||||||||| ||||||||||
Sbjct 4337596 AAGTCTTCCAGAGCCTTCACCAGTCGACGCTGGATGTAACCAGTTTCTGCAGTTTTAACT 4337655
Query 378259 GCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAATTCAGTAGGAGTA 378318
||||||||||| | ||| | | ||| |||| || |||||||| || || | |||||
Sbjct 4337656 GCAGTATCAATGAGACCTTCTCTACCGGCCATGGCGTGGAAGAAGAACTCGGATGGAGTG 4337715
Query 378319 AGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAATCATCATATTTT 378378
|| |||| | | || |||||| || || | || | || || | ||||| |||
Sbjct 4337716 AGACCACGGAGGTACGAGTTCTCAACGAAACCACGAGCTTCGGGAGAGTAATCATCCTTT 4337775
Query 378379 GTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTCGTTTTCCATCAACATTC 378438
|| |||| || | || | | || || ||| | ||||| || ||||| || ||| |
Sbjct 4337776 GTGAAATGGGGAAGAGTTCTGTACTTGAAACCAAAGGGAATACGCTTTCCTTCGACAATT 4337835
Query 378439 TGTTGACC 378446
|| |||||
Sbjct 4337836 TGCTGACC 4337843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515253895230878
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