Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1 271 8e-68 seq4 87.8 2e-12 >seq1 Length=8525130 Score = 271 bits (300), Expect = 8e-68 Identities = 511/748 (68%), Gaps = 4/748 (1%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||| | ||||| | ||||| |||||| || | |||||| | ||||| ||| Sbjct 557460 TCATGAGAGTCGCTGTCGGTATTTGGGGTGACAACATCGAGCGTGTTCTCGAGACCTACA 557401 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 || | ||| | |||| ||| || || ||| | || ||||| |||||||| ||||| Sbjct 557400 ACCTCATGTCTAACAAGTTCTTCACCCATGCCTCCCCTACCCTCTTCAACGCCGGTACAC 557341 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 || ||| | || ||||||| |||| | |||||||| || || || || | Sbjct 557340 CCCAGTGCCAGCTTTCTTCCTGCTTCTTGGTTGACATGAAGGAGGATAGCATTGAGGGTA 557281 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 | ||||| || |||||| |||||| ||||||||| | | ||||| || ||| || Sbjct 557280 TTTACGATACCCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGGTGGCATTGGTCTCA 557221 Query 53433 ACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490 || || | | || ||||||| | ||| | ||| || || ||||| | || | Sbjct 557220 AC-GCCC-ACCGCATCCGTGCCACAGGCTCTTACATCGCTGGTACCAACGGTACCTCCAA 557163 Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550 || || | || ||| | || |||||||||||||| ||||| |||||| |||| ||||| Sbjct 557162 CGGTGTCATCCCCATGTTGCGTGTCTTCAACAACACCGCCCGCTACGTCGACCAAGGTGG 557103 Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610 | ||||| || | |||||||||||||| ||||| |||||||| || | | || Sbjct 557102 TAACAAGCGTCCCGGTGCCTTCGCCATCTACCTTGAGCCCTGGCACGCAGATGTCTTTGA 557043 Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTAC 53670 ||| || || || || |||||| ||| | ||||| | || |||||| || || Sbjct 557042 GTTCCTTGACCTTCGCAAGAATCATGGTAAGGAAGAAGTCCGTGCCCGTGATCTCTTCCT 556983 Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCT 53730 ||||| |||||||| || || |||||| | || |||||| ||| |||||| ||| Sbjct 556982 TGCTCTCTGGATTCCCGATCTTTTCATGAAGCGTGTTGAGAAGAACGGAGAGTGGACCCT 556923 Query 53731 GATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGAT 53790 |||||||| ||||||||||| ||||| | | |||||||||||| || | | | Sbjct 556922 CATGTGCCCCAACGAGTGCCCTGGCCTTGCCGATTGCTACGGTGAGGAATTCGAGGCCCT 556863 Query 53791 GTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATG 53850 ||| || ||||| | | ||||||| | |||| ||||||| | || | || Sbjct 556862 GTACGAGAAGTACGAGGCTGAGGGCCGTGGCCGCAAGACCATCAAGGCTCAGAAGCTTTG 556803 Query 53851 GGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTC 53910 | | || ||||| || ||| ||||| || | || | |||| ||||||||| Sbjct 556802 GTACGCCATCCTTGAGGCTCAGACCGAGACTGGTAACCCCTTCATGCTCTACAAGGACCA 556743 Query 53911 GGTCAACGAGAAGAGCAACCAGAAGAAC 53938 |||| |||||||||||||||||| Sbjct 556742 CTGCAACCGCAAGAGCAACCAGAAGAAC 556715 Score = 93.3 bits (102), Expect = 5e-14 Identities = 144/202 (71%), Gaps = 8/202 (4%) Strand=Plus/Minus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGAC---ATGA 55784 |||||| ||||| ||| || ||||||||| | ||| | | | ||| | ||| Sbjct 555942 TCAAGGCCCTTTACAAGACTGTTTGGGAGATTTCCCAGC---GCCAGGTTGTCCAGATGT 555886 Query 55785 GTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATG-GAGAAT 55843 ||| || |||||||| | |||||||||||| ||||| |||||||| |||| | || Sbjct 555885 CTGCCGACCGTGGTGCCTTCATCGACCAGTCTCAGTCCTTGAACATCCACATGCGTGAGC 555826 Query 55844 CCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACG 55903 || || ||| |||| | | | |||||||| ||| |||||| || |||||||| Sbjct 555825 CCACCA-TGGGCAAGATCACCAGCATGCACTTCGCCGGTTGGAAGCTCGGTCTCAAGACC 555767 Query 55904 GGTATGTACTATCTGCGGACCC 55925 || |||||||| || || |||| Sbjct 555766 GGCATGTACTACCTCCGTACCC 555745 >seq4 Length=2750940 Score = 87.8 bits (96), Expect = 2e-12 Identities = 186/278 (67%), Gaps = 0/278 (0%) Strand=Plus/Minus Query 117293 GGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGC 117352 |||| ||||| ||| || ||||||| || |||||||| |||||||| | ||| Sbjct 832692 GGTGAAAGGCGCGTGTGGATATAACGAGGACTGGCAGCATCAGAACCACCAGCCAATCGC 832633 Query 117353 GTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGA 117412 | ||| || | ||||| || |||| | || | ||||| | || |||||| | ||| Sbjct 832632 GAACCAAAGTTACCACTGGGTTCCAGAACATTTACATTGTTAGATCCAACAAAGGTCTGA 832573 Query 117413 GCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCC 117472 || | | ||||| ||| || || ||||| || || || || |||| ||| Sbjct 832572 GCGAGCGCAATGATCGTTTGTTGCAGAGATGCTTCACCGTGATGGTAAGCAGTCTTCTCG 832513 Query 117473 GCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTTCTTCTTGAGGCAG 117532 | || || || || || | | |||||| |||| ||| || ||| | ||| Sbjct 832512 GAGACATAACCAGCAAGTTCAATAACCTTCTGGTCTTTTTGCAGATTGCGCTTAAAACAG 832453 Query 117533 GCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATC 117570 || || | ||||||||||||| |||||| |||||||| Sbjct 832452 GCGTAGAGAACCTTGCGCTGACCTGGCTTGAGACCATC 832415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215822154800