Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq1 271 8e-68
seq4 87.8 2e-12
>seq1
Length=8525130
Score = 271 bits (300), Expect = 8e-68
Identities = 511/748 (68%), Gaps = 4/748 (1%)
Strand=Plus/Minus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
||||| | ||||| | ||||| |||||| || | |||||| | ||||| |||
Sbjct 557460 TCATGAGAGTCGCTGTCGGTATTTGGGGTGACAACATCGAGCGTGTTCTCGAGACCTACA 557401
Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312
|| | ||| | |||| ||| || || ||| | || ||||| |||||||| |||||
Sbjct 557400 ACCTCATGTCTAACAAGTTCTTCACCCATGCCTCCCCTACCCTCTTCAACGCCGGTACAC 557341
Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372
|| ||| | || ||||||| |||| | |||||||| || || || || |
Sbjct 557340 CCCAGTGCCAGCTTTCTTCCTGCTTCTTGGTTGACATGAAGGAGGATAGCATTGAGGGTA 557281
Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432
| ||||| || |||||| |||||| ||||||||| | | ||||| || ||| ||
Sbjct 557280 TTTACGATACCCTCAAGACCTGTGCCATGATCTCCAAGATGGCTGGTGGCATTGGTCTCA 557221
Query 53433 ACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490
|| || | | || ||||||| | ||| | ||| || || ||||| | || |
Sbjct 557220 AC-GCCC-ACCGCATCCGTGCCACAGGCTCTTACATCGCTGGTACCAACGGTACCTCCAA 557163
Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550
|| || | || ||| | || |||||||||||||| ||||| |||||| |||| |||||
Sbjct 557162 CGGTGTCATCCCCATGTTGCGTGTCTTCAACAACACCGCCCGCTACGTCGACCAAGGTGG 557103
Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610
| ||||| || | |||||||||||||| ||||| |||||||| || | | ||
Sbjct 557102 TAACAAGCGTCCCGGTGCCTTCGCCATCTACCTTGAGCCCTGGCACGCAGATGTCTTTGA 557043
Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTAC 53670
||| || || || || |||||| ||| | ||||| | || |||||| || ||
Sbjct 557042 GTTCCTTGACCTTCGCAAGAATCATGGTAAGGAAGAAGTCCGTGCCCGTGATCTCTTCCT 556983
Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCT 53730
||||| |||||||| || || |||||| | || |||||| ||| |||||| |||
Sbjct 556982 TGCTCTCTGGATTCCCGATCTTTTCATGAAGCGTGTTGAGAAGAACGGAGAGTGGACCCT 556923
Query 53731 GATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGAT 53790
|||||||| ||||||||||| ||||| | | |||||||||||| || | | |
Sbjct 556922 CATGTGCCCCAACGAGTGCCCTGGCCTTGCCGATTGCTACGGTGAGGAATTCGAGGCCCT 556863
Query 53791 GTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATG 53850
||| || ||||| | | ||||||| | |||| ||||||| | || | ||
Sbjct 556862 GTACGAGAAGTACGAGGCTGAGGGCCGTGGCCGCAAGACCATCAAGGCTCAGAAGCTTTG 556803
Query 53851 GGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTC 53910
| | || ||||| || ||| ||||| || | || | |||| |||||||||
Sbjct 556802 GTACGCCATCCTTGAGGCTCAGACCGAGACTGGTAACCCCTTCATGCTCTACAAGGACCA 556743
Query 53911 GGTCAACGAGAAGAGCAACCAGAAGAAC 53938
|||| ||||||||||||||||||
Sbjct 556742 CTGCAACCGCAAGAGCAACCAGAAGAAC 556715
Score = 93.3 bits (102), Expect = 5e-14
Identities = 144/202 (71%), Gaps = 8/202 (4%)
Strand=Plus/Minus
Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGAC---ATGA 55784
|||||| ||||| ||| || ||||||||| | ||| | | | ||| | |||
Sbjct 555942 TCAAGGCCCTTTACAAGACTGTTTGGGAGATTTCCCAGC---GCCAGGTTGTCCAGATGT 555886
Query 55785 GTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATG-GAGAAT 55843
||| || |||||||| | |||||||||||| ||||| |||||||| |||| | ||
Sbjct 555885 CTGCCGACCGTGGTGCCTTCATCGACCAGTCTCAGTCCTTGAACATCCACATGCGTGAGC 555826
Query 55844 CCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACG 55903
|| || ||| |||| | | | |||||||| ||| |||||| || ||||||||
Sbjct 555825 CCACCA-TGGGCAAGATCACCAGCATGCACTTCGCCGGTTGGAAGCTCGGTCTCAAGACC 555767
Query 55904 GGTATGTACTATCTGCGGACCC 55925
|| |||||||| || || ||||
Sbjct 555766 GGCATGTACTACCTCCGTACCC 555745
>seq4
Length=2750940
Score = 87.8 bits (96), Expect = 2e-12
Identities = 186/278 (67%), Gaps = 0/278 (0%)
Strand=Plus/Minus
Query 117293 GGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGC 117352
|||| ||||| ||| || ||||||| || |||||||| |||||||| | |||
Sbjct 832692 GGTGAAAGGCGCGTGTGGATATAACGAGGACTGGCAGCATCAGAACCACCAGCCAATCGC 832633
Query 117353 GTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGA 117412
| ||| || | ||||| || |||| | || | ||||| | || |||||| | |||
Sbjct 832632 GAACCAAAGTTACCACTGGGTTCCAGAACATTTACATTGTTAGATCCAACAAAGGTCTGA 832573
Query 117413 GCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCC 117472
|| | | ||||| ||| || || ||||| || || || || |||| |||
Sbjct 832572 GCGAGCGCAATGATCGTTTGTTGCAGAGATGCTTCACCGTGATGGTAAGCAGTCTTCTCG 832513
Query 117473 GCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTTCTTCTTGAGGCAG 117532
| || || || || || | | |||||| |||| ||| || ||| | |||
Sbjct 832512 GAGACATAACCAGCAAGTTCAATAACCTTCTGGTCTTTTTGCAGATTGCGCTTAAAACAG 832453
Query 117533 GCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATC 117570
|| || | ||||||||||||| |||||| ||||||||
Sbjct 832452 GCGTAGAGAACCTTGCGCTGACCTGGCTTGAGACCATC 832415
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215822154800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |