Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq1 313 3e-80
seq3 176 5e-39
seq7 167 3e-36
>seq1
Length=8525130
Score = 313 bits (346), Expect = 3e-80
Identities = 933/1424 (66%), Gaps = 48/1424 (3%)
Strand=Plus/Plus
Query 80356 AACTCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCG 80415
||||| || || | | || ||| | || | ||| | |||||| ||||| || |||
Sbjct 556068 AACTCACCAGCCAAGACACGGCGCTGGTAAATGTTGGAAGTGTAGGGCTCGAAGCACTCA 556127
Query 80416 TTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTC 80475
||||| || || ||||| | || || || ||||| || | | ||||| || ||
Sbjct 556128 TTGTTGCCAAGAATCTGCGAGGTAGATGCAGTAGGCATGGGAGCAAGCAACAAAGAGTTG 556187
Query 80476 CGCAGGCCGTGCTTCTTGATATCCTCGCGCAAATCTGACCAAAAATCAACCCCAA----C 80531
|| | ||||||| ||||| | ||| | | || || || |||| |
Sbjct 556188 CGGATACCGTGCTCCTTGACCTGCTC-CTTGAGGCTATCC------CACTCCCAGAGGTC 556240
Query 80532 GCTG----TGACC--CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGC 80585
|||| |||| |||||||||| || | ||| ||||| || || ||||| |||
Sbjct 556241 GCTGGGCTTGACATTCCACATGTCGAATTGGAGGATACCCTCAGAGGCGGGAGAGCCCTT 556300
Query 80586 GAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCT-CACACGACTCCATAAGGGCCGCGT 80644
||| || ||| || ||||| |||||||| || |||| || | | | ||| ||||
Sbjct 556301 GAAAGTAGAGTAGGGACCCTCTTCCTTGGCCAACTGCACA-GAGGCAGTGACGGCAGCGT 556359
Query 80645 GATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACA 80704
| || ||| ||| || | |||||||| | || |||| ||| ||||| | |
Sbjct 556360 GGTAGATGGTCTCGAAAATCTGCTTGTTCAGCTCACGAGCCTCAGGGGACTCGAAGGGGA 556419
Query 80705 AGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGC 80764
| | | ||| ||||||| || |||||||| |||| | || || ||||| |
Sbjct 556420 GACGTAGAGCGAGGAAGGCGTCAGCAAGACCCTGAACACCGACACCAATGGGACGGTGAC 556479
Query 80765 GCTTGTTCGATCGCTCG-GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTC 80823
|| |||| | | || |||||| ||| ||||| ||| || |||| ||||
Sbjct 556480 GCATGTT-GCTGTTACGAGCCTCCTGAACGGGGTAGTGGTTGACGTCAATGATCTTGTTC 556538
Query 80824 AGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCC 80883
| |||||| ||||||| | || || ||||| || |||| ||||| | | | | |
Sbjct 556539 AAGTTGCGGACAACAACCTGGGTGACTTCATGGAGCTTCTTGAAGTCATACTTGCCCTCG 556598
Query 80884 TTC------ACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCA 80937
|| || || || ||||| ||||| || || ||||| || || ||||| |||
Sbjct 556599 TTGTAGTCAACGAAAGCAGGAAGAGCAAGGGAAGCAAGGTTGCAGACAGCGACCTCATCA 556658
Query 80938 G---CATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGG 80994
| || | ||| ||||| || || ||||| | || || || ||||||| |
Sbjct 556659 GGGGCA-CAGTA--CTCGATAATCTCAGTGCAGAGGTTGGAGCTGCGGATGGTACCCAAG 556715
Query 80995 TTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTC 81054
|| |||||||| |||| |||||| |||||||||| |||| | ||| |||| |||
Sbjct 556716 TTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTACCAGTC 556775
Query 81055 TCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAAT 81114
||| ||| | || |||||||||| ||||| || | ||||||| |||||||
Sbjct 556776 TCGGTCTGAGCCTCAAGGATGGCGTACCAAAGCTTCTGAGCCTTGATGGTCTTGCGGCCA 556835
Query 81115 TTGCCTTCGGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTG 81174
||| || ||| | ||||| |||| | ||||| | |||||| || |
Sbjct 556836 CGGCCCTCAGCCTCGTACTTCTCGTACAGGGCCTCGAATTCCTCACCGTAGCAATCGGCA 556895
Query 81175 AGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTC 81234
||| | ||||||||||| |||||||| ||| ||| || || ||||| ||| ||||
Sbjct 556896 AGGCCAGGGCACTCGTTGGGGCACATGAGGGTCCACTCTCCGTTCTTCTCAACACGCTTC 556955
Query 81235 ATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCA 81294
|||||| || || |||||||| || ||| || || ||| || | || || | |
Sbjct 556956 ATGAAAAGATCGGGAATCCAGAGAGCAAGGAAGAGATCACGGGCACGGACTTCTTCCTTA 557015
Query 81295 CCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATAC 81354
|| || || ||| | || || || || | || || || ||||| ||||| || ||
Sbjct 557016 CCATGATTCTTGCGAAGGTCAAGGAACTCAAAGACATCTGCGTGCCAGGGCTCAAGGTAG 557075
Query 81355 ACGGCGATCGACCCCTTGCGACG------GCCACCCTGGTTGACGTAACGGGCAGTCGCG 81408
| ||||| | || | |||| ||||| |||| |||||| ||||| || |
Sbjct 557076 ATGGCGAAGGCACC---GGGACGCTTGTTACCACCTTGGTCGACGTAGCGGGCGGTGTTG 557132
Query 81409 TTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGC 81468
|| || ||||||||||| ||||||| ||| | || |||||| ||||| ||||
Sbjct 557133 TTGAAGACACGCAACATGGGGATGACACCGTTGGAGGTACCGTTGGTACCAGCGATGTAA 557192
Query 81469 GACCCCTTGGCGCGCA--CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAA 81526
|| || |||| || | | || ||| ||||| |||||||| | | ||| || |
Sbjct 557193 GAGCCTGTGGCACGGATGCGGTGGGCGTTG--AGACCAATGCCACCAGCCATCTTGGAGA 557250
Query 81527 TCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAA 81586
|| ||||| || | ||| || ||||| ||||| |||||||| | ||||||||||
Sbjct 557251 TCATGGCACAGGTCTTGAGGGTATCGTAAATACCCTCAATGCTATCCTCCTTCATGTCAA 557310
Query 81587 GCAAGAAACAGCTTGACATCTGAGGGCT-TTTTGAGCCGGCATTGAACAGTGTTGGGGTC 81645
|||||| ||| || | ||| | || || ||||| ||||| || || ||||
Sbjct 557311 CCAAGAAGCAGGAAGAAAGCTG-GCACTGGGGTGTACCGGCGTTGAAGAGGGTAGGGGAG 557369
Query 81646 GCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCG 81705
|| || |||| | ||| ||||| |||| ||||| || || || || | |
Sbjct 557370 GCATGGGTGAAGAACTTGTTAGACATGAGGTTGTAGGTCTCGAGAACACGCTCGATGTTG 557429
Query 81706 TCACCGTGAATACCGATAGCTACACGCATAAACATGTACTGGGG 81749
||||| |||||||| ||| || | ||| | ||||| ||||||
Sbjct 557430 TCACCCCAAATACCGACAGCGACTCTCATGATCATGTGCTGGGG 557473
Score = 123 bits (136), Expect = 3e-23
Identities = 136/181 (75%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| || ||||| || || || ||||| ||||| || ||||| ||||| || | |||
Sbjct 1347958 TTCGTGAAGACCCTGACGGGTAAGACCATTACCCTCGAGGTCGAGTCCTCGGACACCATC 1348017
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| | || || ||||| |||||||| ||||| || ||||||||||| ||
Sbjct 1348018 GACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATTCCCCCTGACCAGCAGCGCCTG 1348077
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| || ||||| ||||| |||||||||| || ||||| | ||||| || |||| |||
Sbjct 1348078 ATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAG 1348137
Query 27595 G 27595
|
Sbjct 1348138 G 1348138
Score = 105 bits (116), Expect = 8e-18
Identities = 118/158 (75%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 64708 TTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTC 64767
|||| ||||||||||| || ||||| || || || || ||||| ||||| | ||
Sbjct 3939407 TTTGCTCAGCGTCTCGTTGCCTTTGCTGCCGTCGAGGGTATCTTCTTCTCTGGTGCCTTT 3939466
Query 64768 TGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAG 64827
|| || |||||||| || ||||| || || ||||| |||||| | || || ||||||
Sbjct 3939467 GCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTGACCTTCTCCAACGAG 3939526
Query 64828 CTGATCTCTCGGGACGAGGGGCTCCACCAAGAATTTGC 64865
|| |||||||| |||||||| || ||| || |||||
Sbjct 3939527 CTCATCTCTCGTGACGAGGGTCTTCACACCGACTTTGC 3939564
>seq3
Length=4610873
Score = 176 bits (194), Expect = 5e-39
Identities = 177/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| || ||||||||||| || || | ||||||||||| |
Sbjct 3673418 ATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACGATCACATTGGAGGTTGAGTCTTCT 3673359
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | || | ||| | || |||||||| |||||||| |||||||| ||||||
Sbjct 3673358 GATACCATCGACAACGTCAAGTCGAAGATTCAGGATAAGGAGGGTATTCCTCCTGACCAG 3673299
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||||| || |||||||||||||| || || |||| || || || | ||||| ||
Sbjct 3673298 CAACGTCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACTCTCTCTGACTACAAC 3673239
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
| || ||||| |||||| ||||| ||| | ||||| |||||||| ||
Sbjct 3673238 ATTCAGAAGGAGAGCACTCTGCATCTCGTCCTCCGTCTGCGCGGTGGCCA 3673189
Score = 170 bits (188), Expect = 2e-37
Identities = 176/228 (77%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||||||||||||||| ||||| |||||||||||||| | || |||||||||
Sbjct 3673646 ATGCAAATCTTTGTCAAGACTCTTACTGGCAAGACTATTACATTAGAAGTTGAGTCATCG 3673587
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| | ||| | || || || || |||||||| || ||||| || |||
Sbjct 3673586 GACACAATCGACAATGTCAAGTCAAAGATCCAAGATAAGGAGGGTATCCCTCCTGATCAG 3673527
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
|||||||| || ||||| |||||||| |||||||| | ||| || || ||| ||||| ||
Sbjct 3673526 CAGCGTCTTATCTTTGCCGGTAAGCAGCTCGAGGACGGTCGCACTCTGAGC-GACTACAA 3673468
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| || ||||| || | || ||||||| || |||||
Sbjct 3673467 CATTCAGAAGGAGTCTACTCTGCACTTGGTGCTGCGTCTCCGTGGTGG 3673420
Score = 167 bits (184), Expect = 3e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| | ||||| ||||| ||||| || |||||||||||
Sbjct 3673874 ATGCAGATCTTCGTCAAGACTTTGACCGGAAAGACCATTACCCTCGAGGTTGAGTCTTCC 3673815
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || | ||| | || || |||||||||||||| || ||||| ||||||
Sbjct 3673814 GACACTATTGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAG 3673755
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || |||||||| || ||||| || || |||| || ||||| | ||||| ||
Sbjct 3673754 CAGCGCCTGATTTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTTTCCGACTACAAC 3673695
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| |||||||| || |||||||| || | || || || |||||
Sbjct 3673694 ATCCAGAAGGAATCTACCCTTCATCTCGTTCTCCGCCTCCGTGGTGG 3673648
Score = 154 bits (170), Expect = 2e-32
Identities = 156/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||||||||| ||||| || ||||||||||| || | ||||| || | ||| |
Sbjct 3674078 ACCGGCAAGACCATTACCCTCGAGGTTGAGTCTTCCGACACCATTGACAACGTCAAGTCC 3674019
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| ||||||||||||||||||||||| || ||||||||||| || ||||| ||||| |||
Sbjct 3674018 AAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAGCAGCGCCTGATTTTCGCTGGCAAG 3673959
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| |||||||||| || ||||| | || || || | || ||||| ||| || ||
Sbjct 3673958 CAGCTCGAGGATGGCCGCACCCTCTCTGATTACAACATTCAGAAGGAGAGCACCCTCCAC 3673899
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | || ||||| |||||
Sbjct 3673898 CTCGTCCTCCGCCTTCGTGGTGG 3673876
>seq7
Length=1200748
Score = 167 bits (184), Expect = 3e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| ||||| || ||||| || || |||||||| |||||
Sbjct 1041339 ATGCAGATTTTCGTCAAGACCCTTACGGGAAAGACGATCACCCTTGAGGTGGAGTCTTCC 1041398
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | ||| | || || ||||| |||||||| || || || ||||||
Sbjct 1041399 GACACCATTGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCCCCTGACCAG 1041458
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || ||||| ||||| |||||||||| || ||||| | ||||| ||
Sbjct 1041459 CAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAAC 1041518
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| |||||||| || || ||| | || || || |||||
Sbjct 1041519 ATCCAGAAGGAGTCCACTCTCCACCTTGTCCTCCGCCTGCGTGGTGG 1041565
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310214649120
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