Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq3 113 4e-20 >seq3 Length=4610873 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || ||||| || |||||| ||||||| | ||||| || | || Sbjct 3673646 ATGCAAATCTTTGTCAAGACTCTTACTGGCAAGACTATTACATTAGAAGTTGAGTCATCG 3673587 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| ||| || ||||| || || || || || || ||||| Sbjct 3673586 GACACAATCGACAATGTCAAGTCAAAGATCCAAGATAAGGAGGGTATCCCTCCTGATCAG 3673527 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||| || || | || ||| || || | ||| |||||| Sbjct 3673526 CAGCGTCTTATCTTTGCCGGTAAGCAGCTCGAGGACGGTCGCACTCTGAGCGACTACAAC 3673467 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| || | || ||||| ||||| | || ||||| || Sbjct 3673466 ATTCAGAAGGAGTCTACTCTGCACTTGGTGCTGCGTCTCCGTGGTGGTAT 3673417 Score = 82.4 bits (90), Expect = 7e-11 Identities = 119/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071 ||||||||| | ||||| || || || || | |||||| | ||||| | ||||| Sbjct 3674078 ACCGGCAAGACCATTACCCTCGAGGTTGAGTCTTCCGACACCATTGACAACGTCAAGTCC 3674019 Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 || ||||| ||||| || || || || || || || ||||| | || | ||| ||||| Sbjct 3674018 AAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAGCAGCGCCTGATTTTCGCTGGCAAG 3673959 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179 || | || || | ||| | || |||||||||||||| |||||| Sbjct 3673958 CAGCTCGAGGATGGCCGCACCCTCTCTGATTACAACATTCAGAAGGAG 3673911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918258651520