Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq1 86.0 6e-12
>seq1
Length=8525130
Score = 86.0 bits (94), Expect = 6e-12
Identities = 123/167 (74%), Gaps = 6/167 (4%)
Strand=Plus/Plus
Query 6546 GCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGG 6603
||||||| || | ||||| | ||||| || |||| || | || | |||| || |||
Sbjct 935078 GCTCGATATGATCAAGGTATACGTGCGCGTCACCCATGACATGTGT-CAAGCTACC-AGG 935135
Query 6604 AACCA-ACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGA 6662
|| | | | || ||| |||||| ||||| || | ||| ||||| |||||||||||||
Sbjct 935136 CACAAGATCGCAA-ACACGAGCGAGCATGTGGGTCAACAGCGCGTAGCTAGCAATGTTGA 935194
Query 6663 ACGGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709
| ||||| || | ||||| || | |||| ||| ||||||||||||
Sbjct 935195 ATGGCACACCAAGACCCATATCGCAAGATCTTTGGTAGAGCTGGCAG 935241
Score = 86.0 bits (94), Expect = 6e-12
Identities = 123/167 (74%), Gaps = 6/167 (4%)
Strand=Plus/Minus
Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695
|||||||||||| ||| |||| | || ||||| | || ||||| ||||||||||||||
Sbjct 935241 CTGCCAGCTCTACCAAAGATCTTGCGATATGGGTCTTGGTGTGCCATTCAACATTGCTAG 935182
Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGT-TGGTTCCTGGGGAGCTGG 34754
||||| ||| | || ||||| |||||| ||| || | | | || ||| || |||| |
Sbjct 935181 CTACGCGCTGTTGACCCACATGCTCGCTCGTGT-TTGCGATCTTGTGCCT-GGTAGCTTG 935124
Query 34755 TGCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGC 34799
|| | || |||| || ||||| | ||||| | || |||||||
Sbjct 935123 -ACACATGTCATGGGTGACGCGCACGTATACCTTGATCATATCGAGC 935078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448262254314720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |