Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014- 12-05] 26 sequences; 28,476,206 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 6e-12 >seq1 Length=8525130 Score = 86.0 bits (94), Expect = 6e-12 Identities = 123/167 (74%), Gaps = 6/167 (4%) Strand=Plus/Plus Query 6546 GCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGG 6603 ||||||| || | ||||| | ||||| || |||| || | || | |||| || ||| Sbjct 935078 GCTCGATATGATCAAGGTATACGTGCGCGTCACCCATGACATGTGT-CAAGCTACC-AGG 935135 Query 6604 AACCA-ACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGA 6662 || | | | || ||| |||||| ||||| || | ||| ||||| ||||||||||||| Sbjct 935136 CACAAGATCGCAA-ACACGAGCGAGCATGTGGGTCAACAGCGCGTAGCTAGCAATGTTGA 935194 Query 6663 ACGGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709 | ||||| || | ||||| || | |||| ||| |||||||||||| Sbjct 935195 ATGGCACACCAAGACCCATATCGCAAGATCTTTGGTAGAGCTGGCAG 935241 Score = 86.0 bits (94), Expect = 6e-12 Identities = 123/167 (74%), Gaps = 6/167 (4%) Strand=Plus/Minus Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 |||||||||||| ||| |||| | || ||||| | || ||||| |||||||||||||| Sbjct 935241 CTGCCAGCTCTACCAAAGATCTTGCGATATGGGTCTTGGTGTGCCATTCAACATTGCTAG 935182 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGT-TGGTTCCTGGGGAGCTGG 34754 ||||| ||| | || ||||| |||||| ||| || | | | || ||| || |||| | Sbjct 935181 CTACGCGCTGTTGACCCACATGCTCGCTCGTGT-TTGCGATCTTGTGCCT-GGTAGCTTG 935124 Query 34755 TGCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGC 34799 || | || |||| || ||||| | ||||| | || ||||||| Sbjct 935123 -ACACATGTCATGGGTGACGCGCACGTATACCTTGATCATATCGAGC 935078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262254314720