Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq7 95.1 8e-15
seq3 82.4 5e-11
>seq7
Length=1200748
Score = 95.1 bits (104), Expect = 8e-15
Identities = 143/201 (71%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||||| || ||||| |||||||| |||||||| || || || || ||
Sbjct 1041336 AAGATGCAGATTTTCGTCAAGACCCTTACGGGAAAGACGATCACCCTTGAGGTGGAGTCT 1041395
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| ||||| |||| ||| | || | || || || || || ||| | || || ||
Sbjct 1041396 TCCGACACCATTGACAATGTCAAGTC-CAAGATCCAGGATAAGGAGGGTATCCCCCCTGA 1041454
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
|| ||||| | || || || ||||| || || || || | ||||| | ||| ||
Sbjct 1041455 CCAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTA 1041514
Query 23787 CAACATACAAAAAGAGTCCAC 23807
|||||| || || ||||||||
Sbjct 1041515 CAACATCCAGAAGGAGTCCAC 1041535
>seq3
Length=4610873
Score = 82.4 bits (90), Expect = 5e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || || | || ||||| || || || ||||| ||||| || |
Sbjct 3673874 ATGCAGATCTTCGTCAAGACTTTGACCGGAAAGACCATTACCCTCGAGGTTGAGTCTTCC 3673815
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|||||| |||| | | || || || ||||| || || | || || || ||
Sbjct 3673814 GACACTATTGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAG 3673755
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| | || ||||||||||| || || ||||| | ||||| | ||| ||||||
Sbjct 3673754 CAGCGCCTGATTTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTTTCCGACTACAAC 3673695
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820
|| || || || || || | ||| | |||
Sbjct 3673694 ATCCAGAAGGAATCTACCCTTCATCTCGTT 3673665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009492893208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |