Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq7 149 1e-30
seq3 125 2e-23
seq1 111 4e-19
>seq7
Length=1200748
Score = 149 bits (164), Expect = 1e-30
Identities = 162/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|||||||||||||||||||| || || |||| ||||| |||| | || | |||||
Sbjct 1041550 AGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 1041491
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||| || || || ||||| || || ||||| ||||| ||
Sbjct 1041490 TCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTATCC 1041431
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| || |||||||| || | ||||| || | |||||||||
Sbjct 1041430 TGGATCTTGGACTTGACATTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 1041371
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|| ||||| | || || | ||| | ||||| ||
Sbjct 1041370 TTTCCCGTAAGGGTCTTGACGAAAATCTGCATCTT 1041336
>seq3
Length=4610873
Score = 125 bits (138), Expect = 2e-23
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| || || |||||| || || || | ||||| || | | ||| | ||||||
Sbjct 3673207 AGGACGAGATGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCT 3673266
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||| |||||||| ||||| ||||| || |||||||| ||||| ||
Sbjct 3673267 TCAAGCTGCTTACCAGCAAAGATAAGACGTTGCTGGTCAGGAGGAATACCCTCCTTATCC 3673326
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||| || |||||||| || || | || || || || |||||||||
Sbjct 3673327 TGAATCTTCGACTTGACGTTGTCGATGGTATCAGAAGACTCAACCTCCAATGTGATCGTC 3673386
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || | || || | ||| | |||||
Sbjct 3673387 TTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 3673418
Score = 125 bits (138), Expect = 2e-23
Identities = 161/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | ||| || | ||| ||||| || || || || | ||||| ||| || |||
Sbjct 3673425 ACGGAGACGCAGCACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGCTCAGAGT 3673484
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || |||||||| || || |||||||| || || || || || || |||||
Sbjct 3673485 GCGACCGTCCTCGAGCTGCTTACCGGCAAAGATAAGACGCTGCTGATCAGGAGGGATACC 3673544
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| |||||||||||| ||| ||| ||||| ||||| || | || || |||||
Sbjct 3673545 CTCCTTATCTTGGATCTTTGACTTGACATTGTCGATTGTGTCCGATGACTCAACTTCTAA 3673604
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || |||||||| || | ||| || | || | ||||||
Sbjct 3673605 TGTAATAGTCTTGCCAGTAAGAGTCTTGACAAAGATTTGCAT 3673646
>seq1
Length=8525130
Score = 111 bits (122), Expect = 4e-19
Identities = 132/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| |||| | || | ||||| || |||||||| |||||||||||
Sbjct 1348136 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 1348077
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
|| || || ||||| || ||||| || ||||| || |||||||| ||| ||| |||
Sbjct 1348076 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCG 1348017
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
|||||||| |||| || || || | || || ||||| ||||||| || || | |||
Sbjct 1348016 ATGGTGTCCGAGGACTCGACCTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTCACGAA 1347958
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192530802738044
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |