Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq7 125 2e-23
seq3 111 4e-19
seq1 84.2 5e-11
>seq7
Length=1200748
Score = 125 bits (138), Expect = 2e-23
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||||||||| || ||||| ||||| || ||||||||||| |||| | || | |||||
Sbjct 1041551 GAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 1041492
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || || |||||||| || | ||||||||| | | ||| || ||||| ||
Sbjct 1041491 CTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTATC 1041432
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || |||||| | || | | |||| ||| ||| || ||||| || || ||
Sbjct 1041431 CTGGATCTTGGACTTGACATTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGT 1041372
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC 152110
|| ||||| || ||||| ||||| | |||||| || ||
Sbjct 1041371 CTTTCCCGTAAGGGTCTTGACGAAAATCTGCATCTTGCC 1041333
>seq3
Length=4610873
Score = 111 bits (122), Expect = 4e-19
Identities = 150/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || ||||||||||| || || |||||||| ||| | ||| | || || || |
Sbjct 3673440 CAAG-TGCAGAGTAGACTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGACCGTCCTCGA 3673498
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || ||||| |||||||| | |||||| || | | ||| || ||||| ||||| |
Sbjct 3673499 GCTGCTTACCGGCAAAGATAAGACGCTGCTGATCAGGAGGGATACCCTCCTTATCTTGGA 3673558
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| ||| |||||| | || | |||| || ||| ||||| | |||||||| ||||
Sbjct 3673559 TCTTTGACTTGACATTGTCGATTGTGTCCGATGACTCAACTTCTAATGTAATAGTCTTGC 3673618
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || |||||||| || |||| |||||
Sbjct 3673619 CAGTAAGAGTCTTGACAAAGATTTGCAT 3673646
Score = 111 bits (122), Expect = 4e-19
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || |||||||| ||||| || || ||||||||||| |||| | || |
Sbjct 3673656 GAGGCGGAGAACGAGATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCG 3673715
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|||||||| || || ||||| || || || | ||||||||| | | ||| || ||
Sbjct 3673716 GCCATCTTCAAGCTGCTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGAGGGATGCCCTC 3673775
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || ||||| | || | |||| ||| ||| || || || ||
Sbjct 3673776 CTTGTCCTGGATCTTCGACTTGACGTTGTCAATAGTGTCGGAAGACTCAACCTCGAGGGT 3673835
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| || || || || | |||||| ||||||| ||||||
Sbjct 3673836 AATGGTCTTTCCGGTCAAAGTCTTGACGAAGATCTGCAT 3673874
>seq1
Length=8525130
Score = 84.2 bits (92), Expect = 5e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|| ||||||||||| |||| | || | ||||| || || || || ||||||||
Sbjct 1348136 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 1348077
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
|| | ||||||||| | | || || ||||| || || || || |||||| | ||
Sbjct 1348076 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGTCG 1348017
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAA 152095
| | |||| || ||| || || || ||||| || || ||||| || |||||||||||
Sbjct 1348016 ATGGTGTCCGAGGACTCGACCTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTCACGAA 1347958
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820415633446
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |