Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq7 141 7e-29
seq3 129 4e-25
seq1 113 3e-20
>seq7
Length=1200748
Score = 141 bits (156), Expect = 7e-29
Identities = 159/211 (75%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||| |||||| ||||||||||| |||| ||| ||| | || ||
Sbjct 1041547 ACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCG 1041488
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || ||||||| |||||||| || | || | ||| ||||| |||
Sbjct 1041487 AGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTATCCTGG 1041428
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | |||||||||| || |||||||| | || |||||||
Sbjct 1041427 ATCTTGGACTTGACATTGT--CAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCT 1041370
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||| |||||||| ||||| || |||||
Sbjct 1041369 TTCCCGTAAGGGTCTTGACGAAAATCTGCAT 1041339
>seq3
Length=4610873
Score = 129 bits (142), Expect = 4e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| || || || ||||||||||| || |||||||| || | ||| ||| | || ||
Sbjct 3673210 ACGAGATGCAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCA 3673269
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || |||||||| | ||| ||||| || | ||| | ||| ||||| |||
Sbjct 3673270 AGCTGCTTACCAGCAAAGATAAGACGTTGCTGGTCAGGAGGAATACCCTCCTTATCCTGA 3673329
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
|||||| ||| | | | ||||| || | || || ||||||| || ||||||||
Sbjct 3673330 ATCTTCGACTTGACGTTGTCGATGGTATCAGAAGACTCAACCTCCAATGTGATCGTCTTG 3673389
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||||||||| ||||| || |||||
Sbjct 3673390 CCGGTGAGGGTCTTGACGAAAATCTGCAT 3673418
Score = 118 bits (130), Expect = 8e-22
Identities = 167/233 (72%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | || | || ||||| ||| || || |||||| || |||||||| ||
Sbjct 3673416 CATACCACCACGGAGACGCAGCACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAGTC 3673475
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || ||| |||| || |||||||| ||||||||||| | |||||||||||| |
Sbjct 3673476 GCTCAGAGTGCGACCGTCCTCGAGCTGCTTACCGGCAAAGATAAGACGCTGCTGATCAGG 3673535
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284
||| | ||| ||||| || ||||| ||| || ||| | || ||||| | ||
Sbjct 3673536 AGGGATACCCTCCTTATCTTGGATCTTTGACTTGACATTGT--CGATTGTGTCCGATGAC 3673593
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || | ||||| ||||| || || || ||||| || |||||||||||
Sbjct 3673594 TCAACTTCTAATGTAATAGTCTTGCCAGTAAGAGTCTTGACAAAGATTTGCAT 3673646
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| || ||||| || ||||| ||||||||||| |||| || ||| | || ||
Sbjct 3673666 ACGAGATGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTCA 3673725
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| |||||||| |||| |||||||| || | ||| | || ||||| |||
Sbjct 3673726 AGCTGCTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGG 3673785
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
|||||| ||| | | | || ||||||| || || ||||| | ||||| ||||||
Sbjct 3673786 ATCTTCGACTTGACGTTGTCAATAGTGTCGGAAGACTCAACCTCGAGGGTAATGGTCTTT 3673845
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | ||||| |||||||| |||||
Sbjct 3673846 CCGGTCAAAGTCTTGACGAAGATCTGCAT 3673874
Score = 98.7 bits (108), Expect = 7e-16
Identities = 134/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||||||||||| || ||||||||||| | ||| ||| | || ||
Sbjct 3673894 ACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCATCCTCG 3673953
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || || |||| |||||||| || | || | || ||||| |||
Sbjct 3673954 AGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCAGGGGGAATTCCCTCCTTGTCCTGA 3674013
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||||| || || ||||| | ||||| |||||
Sbjct 3674014 ATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCAACCTCGAGGGTAATGGTCTTG 3674073
Query 44309 CCCGTGA 44315
|| ||||
Sbjct 3674074 CCGGTGA 3674080
>seq1
Length=8525130
Score = 113 bits (124), Expect = 3e-20
Identities = 136/183 (74%), Gaps = 4/183 (2%)
Strand=Plus/Minus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| ||||||||||| |||| ||| ||| | || || |||||||| || || ||||
Sbjct 1348138 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGA 1348079
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
||| |||||||| || | || | || ||||| ||| ||||| ||| || |||
Sbjct 1348078 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGACTTGACATTGT 1348019
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| |||||||| | ||| || ||||| | ||||| ||||| ||||| |||||||||||
Sbjct 1348018 --CGATGGTGTCCGAGGACTCGACCTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTCAC 1347961
Query 44326 GAA 44328
|||
Sbjct 1347960 GAA 1347958
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990285928042
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |