Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Torrubiella_20hemipterigena_20[genbank_20GCA_5F000825705.1_202014-
12-05] 26 sequences; 28,476,206 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq3 149 2e-30
seq7 147 5e-30
seq1 127 5e-24
>seq3
Length=4610873
Score = 149 bits (164), Expect = 2e-30
Identities = 157/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||| | || ||||| || || ||||||||||| || || |||
Sbjct 3673871 CAGATCTTCGTCAAGACTTTGACCGGAAAGACCATTACCCTCGAGGTTGAGTCTTCCGAC 3673812
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || |||||||| ||||| |||||||| || || |||||||| ||||||||
Sbjct 3673811 ACTATTGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAGCAG 3673752
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || || ||||| || ||||| |||||||| | || ||| |||| || ||| ||
Sbjct 3673751 CGCCTGATTTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTTTCCGACTACAACATC 3673692
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || ||||| || || ||||| |||
Sbjct 3673691 CAGAAGGAATCTACCCTTCATCTCGTT 3673665
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || ||||| || || |||||||| | ||||| || || ||
Sbjct 3673415 CAGATTTTCGTCAAGACCCTCACCGGCAAGACGATCACATTGGAGGTTGAGTCTTCTGAT 3673356
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||||||||| || || || || ||||| |||||||||
Sbjct 3673355 ACCATCGACAACGTCAAGTCGAAGATTCAGGATAAGGAGGGTATTCCTCCTGACCAGCAA 3673296
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| |||||||| || || || ||||| |||||||| | ||||| | || || ||| |
Sbjct 3673295 CGTCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACTCTCTCTGACTACAACATT 3673236
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || |||||||| ||
Sbjct 3673235 CAGAAGGAGAGCACTCTGCATCTCGT 3673210
Score = 116 bits (128), Expect = 9e-21
Identities = 127/169 (75%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002
|||| || || || || ||||||||||| || || |||||||| || ||||||||
Sbjct 3674080 TCACCGGCAAGACCATTACCCTCGAGGTTGAGTCTTCCGACACCATTGACAACGTCAAGT 3674021
Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062
|||||||||||||| || ||||| || || |||||||| || || || ||||| || |
Sbjct 3674020 CCAAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAGCAGCGCCTGATTTTCGCTGGCA 3673961
Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGA 178111
| |||||||| ||||| | || || | ||||| ||| | || || ||
Sbjct 3673960 AGCAGCTCGAGGATGGCCGCACCCTCTCTGATTACAACATTCAGAAGGA 3673912
>seq7
Length=1200748
Score = 147 bits (162), Expect = 5e-30
Identities = 156/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || || || ||||| ||||||||||| |||||||| || |||
Sbjct 1041342 CAGATTTTCGTCAAGACCCTTACGGGAAAGACGATCACCCTTGAGGTGGAGTCTTCCGAC 1041401
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || ||||| ||||| ||||| || || || ||||| || ||||||||
Sbjct 1041402 ACCATTGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCCCCTGACCAGCAG 1041461
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || |||||||| ||||| | || || |||| || ||| ||
Sbjct 1041462 CGCCTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATC 1041521
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || |||||
Sbjct 1041522 CAGAAGGAGTCCACTCTCCACCTTGT 1041547
>seq1
Length=8525130
Score = 127 bits (140), Expect = 5e-24
Identities = 136/180 (76%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988
||||||||| || || || || || || || ||||||||||| || ||| ||||||||
Sbjct 1347957 TTTCGTGAAGACCCTGACGGGTAAGACCATTACCCTCGAGGTCGAGTCCTCGGACACCAT 1348016
Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048
||| || ||||| ||||| ||||| || || || || || || |||||||| || ||
Sbjct 1348017 CGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGCATTCCCCCTGACCAGCAGCGCCT 1348076
Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
|||||||| || || |||||||| ||||| | || || |||| || ||| |||| ||
Sbjct 1348077 GATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAA 1348136
Score = 86.0 bits (94), Expect = 2e-11
Identities = 182/270 (67%), Gaps = 4/270 (1%)
Strand=Plus/Plus
Query 214123 CCAAAGTTTTTCTGGTTGCTTTTGCGGCA--AATGGCATCTTTGTATGCGATGAAAGGCA 214180
|| ||||| ||||||||||| |||||| | ||| || ||||| ||||| ||
Sbjct 556710 CCCAAGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGG--TCCTTGTAGAGCATGAAGGGGT 556767
Query 214181 TTCCCACCTCGACTTGAGCGACAAGAATGTGATGCCAGAGTTCTTGGGCCTTCACGACCT 214240
| || |||| ||||| |||| ||| | ||| || | || ||||| | | ||
Sbjct 556768 TACCAGTCTCGGTCTGAGCCTCAAGGATGGCGTACCAAAGCTTCTGAGCCTTGATGGTCT 556827
Query 214241 TTTTGGCTCTTCCCTCGTTTTCGTACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGA 214300
| | | | ||||| |||||||| || || || | ||| |||||| |||||||
Sbjct 556828 TGCGGCCACGGCCCTCAGCCTCGTACTTCTCGTACAGGGCCTCGAATTCCTCACCGTAGC 556887
Query 214301 CATCATCAAGACCGGGAGCCTCGTTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGA 214360
||| |||| || || |||||||||||| | || |||| | ||| || | | |
Sbjct 556888 AATCGGCAAGGCCAGGGCACTCGTTGGGGCACATGAGGGTCCACTCTCCGTTCTTCTCAA 556947
Query 214361 CTCTTTTCATGAAAAGGTCGGAAGTCCAGA 214390
| | ||||||||||| |||| | ||||||
Sbjct 556948 CACGCTTCATGAAAAGATCGGGAATCCAGA 556977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730799007044
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |