Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq56 196 6e-45
>seq56
Length=137465
Score = 196 bits (216), Expect = 6e-45
Identities = 285/398 (72%), Gaps = 6/398 (2%)
Strand=Plus/Plus
Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929
|||||||||||| | | |||||||||||||||||||||| | ||| |||
Sbjct 86606 ACGTAGAACTGGGCAAACATGTGGCAGGGCGGCAGGGCCATGCTCTTGAAGTCTTTTGGG 86665
Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGATCTCCCCTATCAG 145988
||||| ||| |||||| | || | | || | |||||| | || || || |
Sbjct 86666 TTCCATGCGCTGAGGATCATTCTGC-GATCATAGGGGTTGTTGCGGAGCTTGTGGATGAT 86724
Query 145989 GTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGC 146048
|| |||||||| ||||||| || |||||||| ||| | ||| || || ||||
Sbjct 86725 CTCGGCCAGCTGGTCGACGCCCTTGCCGGCGTAATCTGCCTTTGCGTCGACATAGTCGGC 86784
Query 146049 CCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCC 146108
|| ||||||| ||||||||| ||||||||||| || ||||| ||| || | ||||
Sbjct 86785 GCCAAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCTAGGTCGCCGACGTCGCGGTGCGT 86844
Query 146109 CAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--C 146166
|||||| | | | | ||||| || |||||||||||| ||||||||||||||||||| |
Sbjct 86845 GAGCCCGACGCTGTCAAGGAACTCGCGGGACCCGTTGCCGTCCCAGATCTTGACGCCGAC 86904
Query 146167 CTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGG 146226
|||| ||| | | ||||| ||| ||| |||||||||||||||||| ||| |
Sbjct 86905 GTCGCTGAGGG--CGGTGGAGGAGGTGTTGCCCTCGATGAACCAGAGCAGCTCGGCGATG 86962
Query 146227 ACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264
|| | | |||||| | ||||||||| || |||||
Sbjct 86963 ACGGCGCGGAGGAAGACTCGCTTGGTGGTGAGGAGGGG 87000
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590066185993560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |