Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq595 84.2 3e-11
>seq595
Length=8865
Score = 84.2 bits (92), Expect = 3e-11
Identities = 231/336 (69%), Gaps = 40/336 (12%)
Strand=Plus/Plus
Query 9324 ttaatatatcctcataacaatataa-attaatattattcatt---ttttattattaatgt 9379
||||||| | | |||| | | ||| |||||||||||| || ||||| ||||||| |
Sbjct 7866 TTAATAT-TATTAATAATATTTTAATATTAATATTATTAATAATATTTTAATATTAATAT 7924
Query 9380 ---aaaatatgtaa----aatttcaaaaaatattg-tatttatatataatggttttaaaa 9431
||||||| || || || ||||| |||| ||||| ||| || | ||||||
Sbjct 7925 TTAAAAATATTTATTTATAAATTAAAAAATTATTAATATTTTATTATTATAATATTAAAA 7984
Query 9432 aattaaagtctataatattacatttaggattttt----aaatatatctatatttgatttt 9487
| ||||||| ||| | ||| |||| |||||| ||| | | ||||||| || |
Sbjct 7985 ACTTAAAGTATATTTT-TTAAATTTTTTATTTTTTTTAAAAAAAAATTATATTT--TTAT 8041
Query 9488 tattttttcac--attaagtaat----tattttatttaatgatggtggtaattt-atat- 9539
||||||| | ||| | ||| |||||| ||| || || | |||||| ||||
Sbjct 8042 TATTTTTAAATTTATTTAAAAATATAATATTTTTTTTTATTATT-TAATAATTTTATATA 8100
Query 9540 ttattaataactttttttttATATTCAG---ATAGAGT-TAATATTTG--TAAGTTTATT 9593
|| |||| | |||||||||||||| | ||| | |||||||| ||||||| |
Sbjct 8101 TTTTTAAATATTTTTTTTTTATATTTATTAAATATTATATAATATTTAATTAAGTTTTTA 8160
Query 9594 AA--TGATTCTAAAAAATTAAATTTTTCTATTTTAT 9627
|| | | ||||||||||| ||||| ||||||
Sbjct 8161 AAATTAAAAATAAAAAATTAATTTTTT---TTTTAT 8193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755442411235200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |