Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq135 145 2e-29
>seq135
Length=88816
Score = 145 bits (160), Expect = 2e-29
Identities = 423/645 (66%), Gaps = 15/645 (2%)
Strand=Plus/Minus
Query 248782 CTGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACG 248841
|| ||| ||| |||| ||| | | ||| || | ||| | | ||| | ||||| ||
Sbjct 30436 CTTGACTCCGCCATTGTCTATGACCGAGACTTCAACTACCAATACTTCGGCTTCAAGACC 30377
Query 248842 CTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATG 248901
|||||| ||| |||||||| || ||||||||||||| || || || |||||||||
Sbjct 30376 CTGGAGCGATCATATCTCCTGAAGCTTGATGGCAAGATTGTTGAGCGGCCACAGCACATG 30317
Query 248902 TTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTAC 248961
| |||||||||||||| || ||| || |||| ||| | || || ||||| |||
Sbjct 30316 ATTATGCGAGTGGCTGTTGGCATTTGGGGAGACAACATTGAGCGTGTCCTTGAGACATAC 30257
Query 248962 ACCGGAATG---AGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGT 249018
| ||| || || || | || ||||| | || || ||||||||||| |||
Sbjct 30256 CACCTCATGTCCAGCAAATTCT---TTACCCATGCGTCCCCCACCCTCTTCAACGCTGGT 30200
Query 249019 ACCGTCAACAA--TCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCG 249076
||| | ||| |||||| ||| ||||| | ||| |||| | |||||| | |
Sbjct 30199 ACC--CCGCAAGCTCAGCTCTCCTCATGCTTCTTGGTTGACATGAAGGACGACAGCATTG 30142
Query 249077 ACGGCATTTATGACACGCTTAAACAGACG-GCGAAGATTTCTAAATTCGCGGGCGGAATC 249135
| || || || || || || || | | | || | |||||| || | || || || |||
Sbjct 30141 AGGGTATCTACGATAC-TTTGAAGACATGTGCCATGATTTCCAAGATGGCTGGTGGTATC 30083
Query 249136 GGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGGGGTC 249195
|| ||| |||| | ||||| || | || || || ||| || ||||| || |
Sbjct 30082 GGCCTCAACGTCCACCGTATCCGTGCCACAGGCTCTTATATCGCCGGCACAAACGGTACC 30023
Query 249196 AGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCAACCAG 249255
| |||||| | ||| | ||||| ||| | ||| ||||| | | || |||||
Sbjct 30022 TCCAACGGTATCATCCCCATGCTTCGTGTCTTCAACAACACTGCCAGATACGTCGACCAG 29963
Query 249256 GCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATA 249312
| || | || || | || ||||| || | || |||||||||||| |
Sbjct 29962 GGTGGAAACAAGCGTCCTGGTGCCTTTGCCATCTACCTCGAGCCTTGGCACGCCGATGTC 29903
Query 249313 TTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTC 249372
|| |||||||| ||| | |||||| ||||||| || | | || ||||||||
Sbjct 29902 TTTGAGTTCCTTGACCTCCGCAAGAACCACGGCAAGGAAGAGGTCCGTGCCCGTGACCTG 29843
Query 249373 TTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAG 249417
||| || || ||| || | || |||||||| |||||| ||
Sbjct 29842 TTCCTCGCTCTCTGGATCCCTGATCTGTTCATGAAGCGCGTCGAG 29798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073746602767552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |