Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06- 08] 1,439 sequences; 37,686,724 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq111 98.7 9e-16 >seq111 Length=101096 Score = 98.7 bits (108), Expect = 9e-16 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 5593 CAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAG 5652 |||||| || | |||||||||| ||| | ||| | ||| ||| | || |||||| || Sbjct 92323 CAGCTGAGCAACTCGGTCGCCCTCCTTGATCTCATAGTCGGTGTCGGCGTGGTTGAAGAG 92382 Query 5653 CACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAA 5712 | || ||| ||||||||||| ||||| || || || ||||| ||||||||| Sbjct 92383 GAGAACCTTGACGGGTCCGCGGTAGTCTGCGTCAATGACACCGGCGCCGGTGTCGATGAA 92442 Query 5713 GTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCC 5751 ||||||| || ||||| ||||||||||| | ||||| Sbjct 92443 GTGCTTGGAGGCGAGGCCAGAGCGGGGAGCGATTCGGCC 92481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430046857786568