Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq111 98.7 9e-16
>seq111
Length=101096
Score = 98.7 bits (108), Expect = 9e-16
Identities = 117/159 (74%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 5593 CAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAG 5652
|||||| || | |||||||||| ||| | ||| | ||| ||| | || |||||| ||
Sbjct 92323 CAGCTGAGCAACTCGGTCGCCCTCCTTGATCTCATAGTCGGTGTCGGCGTGGTTGAAGAG 92382
Query 5653 CACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAA 5712
| || ||| ||||||||||| ||||| || || || ||||| |||||||||
Sbjct 92383 GAGAACCTTGACGGGTCCGCGGTAGTCTGCGTCAATGACACCGGCGCCGGTGTCGATGAA 92442
Query 5713 GTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCC 5751
||||||| || ||||| ||||||||||| | |||||
Sbjct 92443 GTGCTTGGAGGCGAGGCCAGAGCGGGGAGCGATTCGGCC 92481
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430046857786568
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |