Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq637 140 2e-28
seq13 123 2e-23
>seq637
Length=7549
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1559 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 1500
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 1499 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1465
>seq13
Length=255145
Score = 123 bits (136), Expect = 2e-23
Identities = 203/293 (69%), Gaps = 0/293 (0%)
Strand=Plus/Plus
Query 6195 GACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAAC 6254
|| || |||||||||||||| ||| |||| || ||||| | || || ||||| |||
Sbjct 160853 GATGCCTTCTACCGCTACAAGATGGAGCGCCTCCAGACCAAGATTGAAGGCAAGGGTAAC 160912
Query 6255 GGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCC 6314
||||| || ||||| | |||||| || | |||||| || | || | |||||||
Sbjct 160913 GGTATCAAGACCGTTGTCGTCAACTTGTCCAGCGTCGCTCAGTCTCTTGCTCGCCCTGGT 160972
Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374
||||| | || || || || | ||| ||||| |||||||| | |||| | |||
Sbjct 160973 TCCTACGTCATCAAGTACTTTGGTTTCGAGCTTGGTGCTCAGACCAACATTGACCCCAAG 161032
Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434
| || || | ||| | ||||| | || | | |||||||||||||| || ||
Sbjct 161033 GATGACCGTTGGATCATCAACGGCGCCCACGATGCCGCCAAGCTGCAGGATCATCTCGAT 161092
Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487
||||| || ||| ||||| || || | ||||| | ||||| ||||||||
Sbjct 161093 GGCTTCATCAACAAATTTGTCCTTTGCAAGAAATGCAAGAACCCTGAGACCGA 161145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334941325758809
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |