Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq38 185 2e-41
seq5 170 4e-37
seq219 159 6e-34
seq116 95.1 2e-14
>seq38
Length=159530
Score = 185 bits (204), Expect = 2e-41
Identities = 177/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || |||||||| | |||||||| || |||||||| || |||||||| || |||||
Sbjct 138721 CCACCACGAAGGCGGAGAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 138662
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| |||| |||||||| | |||||| |||||||| || | | || ||||| || |||
Sbjct 138661 AGAGTCCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGAGGA 138602
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | ||| || ||||||||||| | || || ||
Sbjct 138601 ATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGAAGACTCCACC 138542
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||||||| || || ||||||||||||||||| || |||||
Sbjct 138541 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 138495
Score = 131 bits (144), Expect = 3e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| || ||| ||| || |||||||| || |||
Sbjct 139234 CCACCACGCAGACGGAGAACCAAGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 139175
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || ||||| | |||||| || || || || || | || ||||| || |||
Sbjct 139174 AGGGTACGACCGTCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCAGGGGGA 139115
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||||| ||||| |||||||| || | ||| || ||
Sbjct 139114 ATACCCTCCTTGTCCTGGATCTTTGATTTGACATTGTCGATGGTATCAGATGACTCCACC 139055
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| ||||| || || || || | ||||||||||| ||||||||
Sbjct 139054 TCCAGTGTGATTGTCTTGCCGGTTAAAGTCTTGACGAAGATCTGCAT 139008
>seq5
Length=314554
Score = 170 bits (188), Expect = 4e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||||| |||| ||| || || ||||| || |||||||| || |||
Sbjct 52323 CCACCACGCAGGCGCAGGACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTC 52382
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || ||||| || | || || ||||| || |||
Sbjct 52383 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCCGGGGGA 52442
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | ||||||| ||||||||||| | || || ||
Sbjct 52443 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 52502
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || || |||||||||||||||||||| ||||||||
Sbjct 52503 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 52549
>seq219
Length=54288
Score = 159 bits (176), Expect = 6e-34
Identities = 563/868 (65%), Gaps = 25/868 (3%)
Strand=Plus/Plus
Query 9933 TTCATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCC 9992
|||||||| || |||||||||||||| || || |||||||||||||| ||||||
Sbjct 42453 TTCATGACACCAGCCTTCTGGTACTCGCCGACACGCTTCTCGAAGAAGTTGGTCTTGCCG 42512
Query 9993 TCGAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAA 10052
| || |||||| |||||| |||||||||||||| || | ||| ||
Sbjct 42513 CCCAGAGAAATGTTCTCCATAAAGTCAAAGGGGTTGGAGGACTTGTAGATCTTCTCGTTT 42572
Query 10053 CCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAG 10112
||||| || | | || || || || ||||| |||||||| ||||||||| | |
Sbjct 42573 CCGAGAGCGACAAGCAGACGATCGGCAACAAACTCAATGTACTGCTTCATCAGGTTGGCG 42632
Query 10113 TTCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACC 10172
|||||||| | | ||| |||| || || | ||| |||| ||| | |||
Sbjct 42633 TTCATGCCCAGAAGAGCGCAAGGGAGAGCCTCAGTCAAGAACTCCTGCTCGATTCTGACG 42692
Query 10173 GCTTCCTCGACGATG---CTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAA 10229
|| || || |||| | | | | | | || | || ||| || | ||
Sbjct 42693 GCATCAGTGATGATGTCACGGATAATCTCCTTGCTGGCGCGGTTCTTC---AGGTGAGAG 42749
Query 10230 TACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGAC 10289
| || || |||| | ||| || |||||||| || ||||| |||||||||
Sbjct 42750 TGGAGCAGGCAAGCAAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAG 42809
Query 10290 AAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCG 10349
|| |||||| |||||||| || | || |||||||| |||| | || | |||
Sbjct 42810 AAGGTCAGACCAGGCATGAGACCTCTCTTCTTGAGCCAGAAGATGGAGGCAAAGGCTCCG 42869
Query 10350 GAGAACAGAAGACCCTCCAC-GCACACCCAGGCGACGAGGCGCTCTGCGAAGGA-GCGGT 10407
||| | | |||||| || ||| | |||| ||||| |||| || ||||| | | |
Sbjct 42870 CTGAAGAAGATACCCTCAACAGCAG-CAAAGGCAACGAGACGCTGGGCAAAGGAAGAGTT 42928
Query 10408 CGCG--CGAAAAGTATTTCGAGGCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTC 10465
| | | | | || ||||||| | |||||||| | | | |||||| |||||
Sbjct 42929 CTTGTCCTGGATCCACTTGATGGCCCACTCGGCCTTCTTGCGAATGCAAGGGATAGTCTC 42988
Query 10466 GATAGCCTCGAAGAGCTTGTTACGCTCGGTCTCGTCCTCAA--TAAGAGCATCAAGGAGC 10523
||||| | |||||| | | | |||| | | | |||| | || | | || | ||||
Sbjct 42989 AATAGCGTTGAAGAGGTAGGTGCGCTGGCTGTGCTCCTTGACGTAGGTG--TCGATGAGC 43046
Query 10524 AGGGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAA-CATACG 10582
|| |||||| |||| ||||| | |||| | |||| || ||||||| ||| ||
Sbjct 43047 AGAGAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAT-CG 43105
Query 10583 TGCCGAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCC 10642
||| |||| | || || || || | | ||||||||| | || |||||
Sbjct 43106 AGCCTCGGGGATCTGAACCTCGCCGCTGAAACGCTCGACCAGGTTCTCGTTGACAATGCC 43165
Query 10643 ATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCA- 10701
|| | | ||||||||| | |||||||| |||||||| ||| ||||||||||
Sbjct 43166 GTCCGAGGCAGCAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAG 43225
Query 10702 ---GTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGA 10758
||| || |||||| || ||||| | || | | |||||| |||||||||
Sbjct 43226 GCGGTTGTT----CCAGTCGTGCAAATCCTTGGACAGATCAATCTCCTCGGCGGTCCAGA 43281
Query 10759 AAGTGGCAACGGCCTTCTTGTACATCTG 10786
| | || | |||||||||||||| ||
Sbjct 43282 AGGAAGCCTCAGCCTTCTTGTACATTTG 43309
>seq116
Length=98879
Score = 95.1 bits (104), Expect = 2e-14
Identities = 129/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 225817 GGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCC 225876
|||||| ||||| | ||| | || || ||||| | || ||| |||||| | ||
Sbjct 43066 GGGGAAACCCTCAACCTGCTCGTTGTTGATGGCACGCATGAGAGTAGACTTGCCGGAACC 43007
Query 225877 GTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAG 225936
|||||||||| || || ||| | | || ||||||| | |||| | || ||| ||
Sbjct 43006 GTTGGGACCGCAAAGACCATAACGCTGACCACGCTTGAGGCGGAGGTGGGTCTGGTTAAG 42947
Query 225937 GAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996
|| |||||| |||| |||||||| ||||| ||| | ||| |||||||| ||||||||
Sbjct 42946 CAGAATCTTGGCACCGTAGGCAAGAGAGAAGGTGCAGTTGCAAAGGTCCTCGCCCTCCTC 42887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921605822317080
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