Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq219 370 2e-97
seq135 233 4e-56
>seq219
Length=54288
Score = 370 bits (410), Expect = 2e-97
Identities = 609/862 (71%), Gaps = 32/862 (4%)
Strand=Plus/Minus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || ||| ||||||||||||||||||||| |||
Sbjct 43315 ATCTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACCGCCGAGGAGATTGATCTG 43256
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA--GA--ACGAAAAGTTTTTCCTCAA 42415
||||||| | || |||| | || | |||| || |||| |||| ||| ||
Sbjct 43255 TCCAAGGATTTGCACGACTGGAACA-ACCGCCTGAACGATGACGAGAAGTACTTCATCTC 43197
Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475
|||| ||||||||||| || ||||| |||||||| ||||| |||||||||| | |
Sbjct 43196 TCACATCCTGGCCTTCTTTGCTGCCTCGGACGGCATTGTCAACGAGAACCTGGTCGAGCG 43137
Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
|||| ||||| ||| | ||||| || ||||||||||| |||||||| ||
Sbjct 43136 TTTCAGCGGCGAGGTTCAGATCCCCGAGGCTCGATGCTTCTACGGTTTCCAGATCATGAT 43077
Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCC 42592
|||||| | ||||| ||| ||| | ||||||| |||| ||| || ||| |
Sbjct 43076 GGAGAACATCCACTCCGAGACATACTC---TCTGCTCATCGACACCTACGTCAAGGAGCA 43020
Query 42593 CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGC 42652
| | |||| | | || ||||| || || ||||| || || ||||| ||||||||
Sbjct 43019 CAGCCAGCGCACCTACCTCTTCAACGCTATTGAGACTATCCCTTGCATTCGCAAGAAGGC 42960
Query 42653 GGACTGGGCGCTCAACTGGATCGAGAGTCCCG-ACGCAACGTTCGGCGAGAGGCTGGTAG 42711
|| ||||| |||| |||||| || | | | || | | || | | || | || || |
Sbjct 42959 CGAGTGGGCCATCAAGTGGATCCAG-GACAAGAACTCTTCCTTTGCCCAGCGTCTCGTTG 42901
Query 42712 CCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCA 42771
||||| | || || ||||| ||||||||| || ||||| |||||||||||||||||||
Sbjct 42900 CCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGAGCCTTTGCCTCCATCTTCTGGCTCA 42841
Query 42772 AGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAG 42830
|| ||| |||| || ||||| || || |||||||| ||||| |||||| | ||||||
Sbjct 42840 AGAAGAGAGGTCTC-ATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAG 42782
Query 42831 GGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCG 42890
|| ||||| | |||||||| ||||| || ||| ||||| | | || ||
Sbjct 42781 GGTCTGCACACTGACTTTGCTTGCCTGCTCCACTC---TCACCTGAAGAACCGCGCCAGC 42725
Query 42891 AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACG 42950
|||||| |||| | ||||||||| || ||||| |||||| |||||||| | ||
Sbjct 42724 AAGGAGATTATCCGTGACATCATCACTGATGCCGTCAGAATCGAGCAGGAGTTCTTGACT 42665
Query 42951 CAGTCGCTGCCCGTG-TCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCA 43009
|| | || ||| || | || | ||||||||| | |||| ||| ||||||| |
Sbjct 42664 GAGGCTCT-CCCTTGCGCTCTTCTGGGCATGAACGCCAACCTGATGAAGCAGTACATTGA 42606
Query 43010 GTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTC--AGCCG----CCTCTACAACAC 43063
|| || ||||| | ||| || || | | |||| | || ||||||| |
Sbjct 42605 GTTTGTTGCCGATCGTCTGCT-TG-----TCGCTCTCGGAAACGAGAAGATCTACAAGTC 42552
Query 43064 GCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGA 43123
| |||||| ||||||||||||||||| || ||| |||||||||||||| |||||
Sbjct 42551 CTCCAACCCCTTTGACTTTATGGAGAACATTTCTCTGGGCGGCAAGACCAACTTCTTCGA 42492
Query 43124 GAAGCGCGTCGCCGACTACCAG 43145
|||||| |||| ||| ||||||
Sbjct 42491 GAAGCGTGTCGGCGAGTACCAG 42470
>seq135
Length=88816
Score = 233 bits (258), Expect = 4e-56
Identities = 910/1415 (64%), Gaps = 49/1415 (3%)
Strand=Plus/Plus
Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149
||| || ||||| ||||| || | || || || |||||||||| |||| | || ||
Sbjct 28910 GTTGACAACCTGGAACTCGCCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGG 28969
Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209
||| | | ||| |||| |||| ||||| | ||||| ||||| ||||| || | ||
Sbjct 28970 CTCAAAACACTCGTTGTTACCCAAGATCTGGGAAGTGCTGGCAGTGGGCATAGGGGCGAC 29029
Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCA 244269
|||| ||||| | | |||||| || || | ||||| | ||| |||||
Sbjct 29030 GAGCAAGCTGTTGCGAAGACCGTGCTCCTTAATTTGCTCCTTGAGCGAATCCCACTCCCA 29089
Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329
|| | | ||| | | |||| ||||||||||| | || || | || | |
Sbjct 29090 CAGGTC-----GGT----GGGCTTGACATCCCACATGTCATATTGAAGAATGCCTT--CA 29138
Query 244330 GACGGGGCTG--CCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCT---TACAG 244384
|| | || || |||| | | | || || ||||| || || ||| | || || ||
Sbjct 29139 GAGGCGGGTGATCCCTTGAATGACGAATAAGGACCTTCAACCTTGGCAATCTCCATAGAG 29198
Query 244385 CTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCC 244444
||| ||||| || | |||||||||||| ||||| |||||||| || || ||
Sbjct 29199 GCCTCA---AGGGCAGCATGGTAGATGGTCTCAAAGATTTGCTTGTTCAGCTCACGAGCT 29255
Query 244445 TTGCCGCAGGTGAAGGG--GATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGC 244502
| | | |||||| || || | || | ||| | || || |||||||| || |
Sbjct 29256 TCGGGTGATTCGAAGGGAAGACGCAGAGCA--AGGAAAGCATCAGCAAGTCCCTGGACAC 29313
Query 244503 CGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGT 244562
| | || ||||||| ||| || ||||| | || || | || ||||| |||
Sbjct 29314 CAACACCAATGGGTCGGTGACGGCTGTTGCTGTTGCGAGCCTCCTGAACAGGGTAGTAGT 29373
Query 244563 TGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCA--TGCGGACGACGTCGGCCAGCAG 244620
| | ||||| | ||||||||| ||| | || | | | || ||| |||
Sbjct 29374 TCACATCGATGATGCGGTTGAGGTTACGGACAACCACCTTTGTA--ACTTCGTGAAGCTT 29431
Query 244621 CTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGC 244680
| |||||| || | ||||| | | || || || || | | ||| ||
Sbjct 29432 TTTAAAGTCATA-------GCATCCTTCG---TTGTAGTCGACAAAAGCAGG--GAGAGC 29479
Query 244681 GACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGT 244740
| ||||| ||||||||| || ||||| || | | ||||| | |||||| ||
Sbjct 29480 CAAAGAGGCCAAGTTGCAGACAGCGACCTCATCAGGCGCAGAGTACTCAATAATCTCAGT 29539
Query 244741 GCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGC 244800
||||||||| || |||||| ||||||| || || ||| |||| |||||||
Sbjct 29540 GCAGAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGCT 29599
Query 244801 GTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCA 244860
|||||||||||||||||||| || ||||| |||||| | |||| || |||
Sbjct 29600 ATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCCAGGATAGAGTACCA 29659
Query 244861 GAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAG 244920
|| | | ||| || ||| ||||| | ||||| ||| || |||||
Sbjct 29660 CAGCTTCTGAGCTCGGATAGTCTTGCGACCACGTCCCTCCTTCTCATACTTCTCATACAG 29719
Query 244921 GGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAG 244980
|||||||| || ||| || || | ||||| ||||| |||||||| |
Sbjct 29720 AGCCTCGAATTCCTCGCCATAGCAGTCAGCAAGGCCAGGGCATTCATTAGGGCACATCAA 29779
Query 244981 ACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTG 245040
| |||| || | | || ||| | || |||||| || || ||||||||||| || |
Sbjct 29780 AGTCCAATCCAAGTTCTTCTCGACGCGCTTCATGAACAGATCAGGGATCCAGAGAGCGAG 29839
Query 245041 GAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTC 245100
||| ||||| | || | ||| ||| ||| |||||| | || || | || ||
Sbjct 29840 GAACAGGTCACGGGCACGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAACTC 29899
Query 245101 AAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCC 245160
|||||| ||| ||||||| ||||| | ||||| || | ||| || || |||||||| ||
Sbjct 29900 AAAGACATCGGCGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTTCC 29959
Query 245161 TCCCTGGTCCACCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGT 245219
|||||||| || || | || | |||||||| || || | || | || ||||
Sbjct 29960 ACCCTGGTCGACGTATCTGGC-AGTGTTGTTGAAGACACGAAGCATGGGGATGATACCGT 30018
Query 245220 TAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGA---GGTTGCTGATGG 245276
| ||| ||||| ||||| ||| || | ||| || | | || ||| | | ||
Sbjct 30019 TGGAGGTACCGTTTGTGCCGGCGATATAAGAGCCTGTGGCACGGATACGGTGGACGTTG- 30077
Query 245277 ACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTA 245336
| ||| | || || || |||||| || | ||| || |||| | || || |
Sbjct 30078 --AGGCCGATACCACCAGCCATCTTGGAAATCATGGCACATGTCTTCAAAGTATCGTAGA 30135
Query 245337 TGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTG- 245395
| ||||| |||||||| |||||||| | || ||||| ||||| |||| | |||||
Sbjct 30136 TACCCTCAATGCTGTCGTCCTTCATGTCAACCAAGAAGCATGAGGAGAGCT-GAGCTTGC 30194
Query 245396 GGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAAC 245455
||| | | | |||||| || |||||| || ||||||||| | ||| || | ||
Sbjct 30195 GGGGTACCAGCGTTGAAGAGGGTGGGGGACGCATGGGTAAAGAATTTGCTGGACATGAGG 30254
Query 245456 CCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCC 245490
||| |||| || | | || |||||||| ||
Sbjct 30255 TGGTATGTCTCAAGGACACGCTCAATGTTGTCTCC 30289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944322213698640
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