Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq135 228 1e-54
seq219 149 7e-31
>seq135
Length=88816
Score = 228 bits (252), Expect = 1e-54
Identities = 1072/1680 (64%), Gaps = 47/1680 (3%)
Strand=Plus/Plus
Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624
||||||| || ||| ||| ||||| | || ||||||||||| || |||||||| |
Sbjct 28573 TGAACTGGATAGGTGCAGCCGCGGCCTGGGTACGCAGGTAGTACATGCCAGTCTTGAGAC 28632
Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684
| |||||||| || | |||||| || | |||| | ||| ||| | ||||
Sbjct 28633 CAAGCTTCCAGCCAGTGAAATGCATGCTGGTAATCTTGCCCATTGTGGGATCCTTCATGT 28692
Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744
|| ||||| ||||| ||||| ||||| ||||| || || | ||| | | ||
Sbjct 28693 GGATGTTCAAGGACTGGGACTGATCAATGAAAGCACCACGGTCGGCTGACATCTGGA-CA 28751
Query 113745 CATCCTTCATCTTGA----TTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 113800
|| || | |||| | ||||| ||||| |||| ||| ||| || || | ||
Sbjct 28752 -AT--TTGACGTTGAGAAATCTCCCAAACAGTCTTGTACAGGGCCTTGATGTCGGCGGGA 28808
Query 113801 ATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTT 113860
|| | || || ||||| ||||| | | | ||| | | ||||||| | |
Sbjct 28809 ATGTTGGGAATGTTCTGGATAGAGCCGTTCTCAGCAATGATGCGGTTCTTCATAGCATCG 28868
Query 113861 GACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAACAACAAAC 113917
||||| || || | | ||||||| |||| || |||||||| |||
Sbjct 28869 GACCAAAGGCCGGTATCGACAAGATCCTT---GAGAAGCCAGGGGTTGACAACCTGGAAC 28925
Query 113918 TCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTG 113977
|| || || ||| |||| | | ||||| |||| ||||| |||||||| ||||| |||
Sbjct 28926 TCGCCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCAAAACACTCGTTG 28985
Query 113978 TTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGG 114037
||||||||||| |||| ||| ||| |||||||| || || | ||| | |||||| ||
Sbjct 28986 TTACCCAAGATCTGGGAAGTGCTGGCAGTGGGCATAGGGGCGACGAGCAAGCTGTTGCGA 29045
Query 114038 AGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCC 114097
||||| | ||| |||| | |||||||| | ||||| || | | | | ||
Sbjct 29046 AGACCGTGCTCCTTAATTTGCTCCTTGAGCGAATCCCACTCCCACAGGTCGGTGGGCTTG 29105
Query 114098 CCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCG 114157
| | |||||| ||| | || || || |||| ||||| || ||||||| |||| |
Sbjct 29106 ACATCCCACATGTCATATTGAAGAATGCCTTCAGAGGCGGGTGATCCCTTGAATGACGAA 29165
Query 114158 TATGGGCCCTCAACCTCCGCCAATTC---GGAGCTCGCCTCGAGGGCTGCGTGATACATT 114214
|| || || ||||||| || | || ||| ||||| ||||| || || || ||
Sbjct 29166 TAAGGACCTTCAACCTTGGCAATCTCCATAGAG---GCCTCAAGGGCAGCATGGTAGATG 29222
Query 114215 GTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCAC 114274
|||||||| || | |||| | || ||| || || || | || | |||
Sbjct 29223 GTCTCAAAGATTTGCTTGTTCAGCTCACGAGCTTCGGGTGATTCGAAGGGAAGAC-GCAG 29281
Query 114275 A-AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 114333
| || || |||| || || || |||||||| | ||||| || || || | | ||
Sbjct 29282 AGCAAGGAAAGCATCAGCAAGTCCCTGGACACCAACACCAATGGGTCGGTGACGGCTGTT 29341
Query 114334 AGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTT 114393
|| ||||| || || || || | ||| |||||| | | || || ||
Sbjct 29342 GCTGTTGCGAGCCTCCTGAACAGGGTAGTAGTTCACATCGATGATGCGGTTGAGGTTACG 29401
Query 114394 GGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATT 114453
| || |||||||| | ||| |||||||||| | ||| | | | | | |
Sbjct 29402 GACAACCACCTTTGTAACTTCGTGAAGCTTTTTAAAGTCATAGCATCCTTCGTTGTAGTC 29461
Query 114454 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 114513
|||| | ||| || || | || |||| || || |||| | |||||| |||
Sbjct 29462 GACAAAAGCAGGGAGAGCCAAAGAGGCCAAGTTGCAGACAGCGACCTCATCAGGCGCAGA 29521
Query 114514 GTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 114573
|||||| ||||| || || || | || || || ||||| |||| |||||| || ||
Sbjct 29522 GTACTCAATAATCTCAGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTT 29581
Query 114574 TGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 114633
||| ||| || ||||||||| |||||| | || | || ||||| || ||||
Sbjct 29582 GCTCTTGCGGTTGCAGCTATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGC 29641
Query 114634 CTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCT 114692
|| || |||| | ||| | | || | ||| | | ||| | | || |||||||
Sbjct 29642 CTCCAGGATAGAGTACCACAGCTTCTG-AGCTCGGATAGTCTTGCGACCACGTCCCTCCT 29700
Query 114693 CCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTG 114752
||| ||||| || || || || || || || || | || | || || || |
Sbjct 29701 TCTCATACTTCTCATACAGAGCCTCGAATTCCTCGCCATAGCAGTCAGCAAGGCCAGG-G 29759
Query 114753 CCTT-ATCTGGGCAGAAGAGAGACCATTGACCA--CCCTCCTCAACACGCTTCATGAAGA 114809
| || || ||||| | | || ||| | ||| || ||| || ||||||||||| |
Sbjct 29760 CATTCATTAGGGCACATCAAAGTCCAAT--CCAAGTTCTTCTCGACGCGCTTCATGAACA 29817
Query 114810 GGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGAT 114869
| || |||||||||||||| ||| || || || || | ||||| | || || |
Sbjct 29818 GATCAGGGATCCAGAGAGCGAGGAACAGGTCACGGGCACGGACCTCTTCCTTGCCGTGGT 29877
Query 114870 TGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 114929
| || | || | || || | || ||| |||||||| || || ||||| | || |
Sbjct 29878 TCTTGCGGAGGTCAAGGAACTCAAAGACATCGGCGTGCCAAGGCTCGAGGTAGATGGCAA 29937
Query 114930 TTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATA 114983
| || | |||| ||| |||||| || || || || ||| || || |
Sbjct 29938 AGGCACC---AGGACGCTTGTTTCCACCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGA 29994
Query 114984 CGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTT 115041
| |||||||| || |||||||| | || || ||||| || ||| ||| ||| ||
Sbjct 29995 CACGAAGCATGGGGATGATACCGTTGGAGGTACCGTTTGTGCCGGCGATATAAGAGCCT- 30053
Query 115042 ATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGC 115101
|||| | || | |||| || | || ||||| || ||| ||| || || ||
Sbjct 30054 -GTGGCACGGATACGGTGGACGTTGAGGCCGATACCACCAGCCATCTTGGAAATCATGGC 30112
Query 115102 GCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAA 115161
|| | | | | | ||||||| || || || ||| |||| | | | | |||
Sbjct 30113 ACATGTCTTCAAAGTATCGTAGATACCCTCAATGCTGTCGTCCTTCATGTCAACCAAGAA 30172
Query 115162 GCAGCTCGACATTTGTGGCCTT--GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGG 115219
||| || | || | ||| || |||||||||||||||||||| || | ||| |||
Sbjct 30173 GCATGAGGAGAGCTGAG--CTTGCGGGGTACCAGCGTTGAAGAGGGTGGGGGACGCATGG 30230
>seq219
Length=54288
Score = 149 bits (164), Expect = 7e-31
Identities = 351/523 (67%), Gaps = 13/523 (2%)
Strand=Plus/Plus
Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106
||||| || ||| |||||||||||||| |||||||| || || |||||| ||| ||
Sbjct 42762 GCAAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCA 42821
Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166
||||||||||| | |||||| | |||||| || | ||| | || |||||||||
Sbjct 42822 GGCATGAGACCTCTCTTCTTGAGCCAGAAGATGGAGGCAAAGGCTCCGCTGAAGAAGATA 42881
Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---A 126223
||||| ||| || || |||| |||||||| |||||||| || || ||||
Sbjct 42882 CCCTCAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGA---AGAGTTCTTGTCCTGG 42938
Query 126224 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 126283
| |||||| || ||||||| ||||| || || || |||| |||| || || |
Sbjct 42939 ATCCACTTGATGGCCCACTCGGCCTTCTTGCGAATGCAAGGGATAGTCTCAATAGCGTTG 42998
Query 126284 AAGAGTTCCTTCTTTTCTGATG-GATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 126342
||||| | | | | || | || |||| ||| | || ||||| || |||||
Sbjct 42999 AAGAGGTAGGTGCGCT-GGCTGTGCTCCTTGACGTAGGTGTCGATGAGCAGAGAGTATGT 43057
Query 126343 TTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTA 126401
||| ||||| | | ||| || | ||| | ||||||| | || || ||| |
Sbjct 43058 CTCGGAGTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCATCGAGCCTCGGGGA 43116
Query 126402 TCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAG 126461
|||| ||||| || ||| | | ||||| ||||| || || || |||
Sbjct 43117 TCTGAACCTCGCCGCTGAAACGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGAGGCAG 43176
Query 126462 CAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCC 126518
|||| || |||||||| | ||||| | || || | ||||||| || | ||||
Sbjct 43177 CAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCC 43236
Query 126519 AGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561
|||||| | |||||| || ||||| | |||||| || |||||
Sbjct 43237 AGTCGTGCAAATCCTTGGACAGATCAATCTCCTCGGCGGTCCA 43279
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597342855102120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |