Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06- 08] 1,439 sequences; 37,686,724 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq135 228 1e-54 seq219 149 7e-31 >seq135 Length=88816 Score = 228 bits (252), Expect = 1e-54 Identities = 1072/1680 (64%), Gaps = 47/1680 (3%) Strand=Plus/Plus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 ||||||| || ||| ||| ||||| | || ||||||||||| || |||||||| | Sbjct 28573 TGAACTGGATAGGTGCAGCCGCGGCCTGGGTACGCAGGTAGTACATGCCAGTCTTGAGAC 28632 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684 | |||||||| || | |||||| || | |||| | ||| ||| | |||| Sbjct 28633 CAAGCTTCCAGCCAGTGAAATGCATGCTGGTAATCTTGCCCATTGTGGGATCCTTCATGT 28692 Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744 || ||||| ||||| ||||| ||||| ||||| || || | ||| | | || Sbjct 28693 GGATGTTCAAGGACTGGGACTGATCAATGAAAGCACCACGGTCGGCTGACATCTGGA-CA 28751 Query 113745 CATCCTTCATCTTGA----TTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 113800 || || | |||| | ||||| ||||| |||| ||| ||| || || | || Sbjct 28752 -AT--TTGACGTTGAGAAATCTCCCAAACAGTCTTGTACAGGGCCTTGATGTCGGCGGGA 28808 Query 113801 ATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTT 113860 || | || || ||||| ||||| | | | ||| | | ||||||| | | Sbjct 28809 ATGTTGGGAATGTTCTGGATAGAGCCGTTCTCAGCAATGATGCGGTTCTTCATAGCATCG 28868 Query 113861 GACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAACAACAAAC 113917 ||||| || || | | ||||||| |||| || |||||||| ||| Sbjct 28869 GACCAAAGGCCGGTATCGACAAGATCCTT---GAGAAGCCAGGGGTTGACAACCTGGAAC 28925 Query 113918 TCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTG 113977 || || || ||| |||| | | ||||| |||| ||||| |||||||| ||||| ||| Sbjct 28926 TCGCCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCAAAACACTCGTTG 28985 Query 113978 TTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGG 114037 ||||||||||| |||| ||| ||| |||||||| || || | ||| | |||||| || Sbjct 28986 TTACCCAAGATCTGGGAAGTGCTGGCAGTGGGCATAGGGGCGACGAGCAAGCTGTTGCGA 29045 Query 114038 AGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCC 114097 ||||| | ||| |||| | |||||||| | ||||| || | | | | || Sbjct 29046 AGACCGTGCTCCTTAATTTGCTCCTTGAGCGAATCCCACTCCCACAGGTCGGTGGGCTTG 29105 Query 114098 CCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCG 114157 | | |||||| ||| | || || || |||| ||||| || ||||||| |||| | Sbjct 29106 ACATCCCACATGTCATATTGAAGAATGCCTTCAGAGGCGGGTGATCCCTTGAATGACGAA 29165 Query 114158 TATGGGCCCTCAACCTCCGCCAATTC---GGAGCTCGCCTCGAGGGCTGCGTGATACATT 114214 || || || ||||||| || | || ||| ||||| ||||| || || || || Sbjct 29166 TAAGGACCTTCAACCTTGGCAATCTCCATAGAG---GCCTCAAGGGCAGCATGGTAGATG 29222 Query 114215 GTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCAC 114274 |||||||| || | |||| | || ||| || || || | || | ||| Sbjct 29223 GTCTCAAAGATTTGCTTGTTCAGCTCACGAGCTTCGGGTGATTCGAAGGGAAGAC-GCAG 29281 Query 114275 A-AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 114333 | || || |||| || || || |||||||| | ||||| || || || | | || Sbjct 29282 AGCAAGGAAAGCATCAGCAAGTCCCTGGACACCAACACCAATGGGTCGGTGACGGCTGTT 29341 Query 114334 AGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTT 114393 || ||||| || || || || | ||| |||||| | | || || || Sbjct 29342 GCTGTTGCGAGCCTCCTGAACAGGGTAGTAGTTCACATCGATGATGCGGTTGAGGTTACG 29401 Query 114394 GGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATT 114453 | || |||||||| | ||| |||||||||| | ||| | | | | | | Sbjct 29402 GACAACCACCTTTGTAACTTCGTGAAGCTTTTTAAAGTCATAGCATCCTTCGTTGTAGTC 29461 Query 114454 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 114513 |||| | ||| || || | || |||| || || |||| | |||||| ||| Sbjct 29462 GACAAAAGCAGGGAGAGCCAAAGAGGCCAAGTTGCAGACAGCGACCTCATCAGGCGCAGA 29521 Query 114514 GTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 114573 |||||| ||||| || || || | || || || ||||| |||| |||||| || || Sbjct 29522 GTACTCAATAATCTCAGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTT 29581 Query 114574 TGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 114633 ||| ||| || ||||||||| |||||| | || | || ||||| || |||| Sbjct 29582 GCTCTTGCGGTTGCAGCTATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGC 29641 Query 114634 CTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCT 114692 || || |||| | ||| | | || | ||| | | ||| | | || ||||||| Sbjct 29642 CTCCAGGATAGAGTACCACAGCTTCTG-AGCTCGGATAGTCTTGCGACCACGTCCCTCCT 29700 Query 114693 CCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTG 114752 ||| ||||| || || || || || || || || | || | || || || | Sbjct 29701 TCTCATACTTCTCATACAGAGCCTCGAATTCCTCGCCATAGCAGTCAGCAAGGCCAGG-G 29759 Query 114753 CCTT-ATCTGGGCAGAAGAGAGACCATTGACCA--CCCTCCTCAACACGCTTCATGAAGA 114809 | || || ||||| | | || ||| | ||| || ||| || ||||||||||| | Sbjct 29760 CATTCATTAGGGCACATCAAAGTCCAAT--CCAAGTTCTTCTCGACGCGCTTCATGAACA 29817 Query 114810 GGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGAT 114869 | || |||||||||||||| ||| || || || || | ||||| | || || | Sbjct 29818 GATCAGGGATCCAGAGAGCGAGGAACAGGTCACGGGCACGGACCTCTTCCTTGCCGTGGT 29877 Query 114870 TGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 114929 | || | || | || || | || ||| |||||||| || || ||||| | || | Sbjct 29878 TCTTGCGGAGGTCAAGGAACTCAAAGACATCGGCGTGCCAAGGCTCGAGGTAGATGGCAA 29937 Query 114930 TTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATA 114983 | || | |||| ||| |||||| || || || || ||| || || | Sbjct 29938 AGGCACC---AGGACGCTTGTTTCCACCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGA 29994 Query 114984 CGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTT 115041 | |||||||| || |||||||| | || || ||||| || ||| ||| ||| || Sbjct 29995 CACGAAGCATGGGGATGATACCGTTGGAGGTACCGTTTGTGCCGGCGATATAAGAGCCT- 30053 Query 115042 ATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGC 115101 |||| | || | |||| || | || ||||| || ||| ||| || || || Sbjct 30054 -GTGGCACGGATACGGTGGACGTTGAGGCCGATACCACCAGCCATCTTGGAAATCATGGC 30112 Query 115102 GCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAA 115161 || | | | | | ||||||| || || || ||| |||| | | | | ||| Sbjct 30113 ACATGTCTTCAAAGTATCGTAGATACCCTCAATGCTGTCGTCCTTCATGTCAACCAAGAA 30172 Query 115162 GCAGCTCGACATTTGTGGCCTT--GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGG 115219 ||| || | || | ||| || |||||||||||||||||||| || | ||| ||| Sbjct 30173 GCATGAGGAGAGCTGAG--CTTGCGGGGTACCAGCGTTGAAGAGGGTGGGGGACGCATGG 30230 >seq219 Length=54288 Score = 149 bits (164), Expect = 7e-31 Identities = 351/523 (67%), Gaps = 13/523 (2%) Strand=Plus/Plus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| |||||||||||||| |||||||| || || |||||| ||| || Sbjct 42762 GCAAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCA 42821 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||||||||| | |||||| | |||||| || | ||| | || ||||||||| Sbjct 42822 GGCATGAGACCTCTCTTCTTGAGCCAGAAGATGGAGGCAAAGGCTCCGCTGAAGAAGATA 42881 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---A 126223 ||||| ||| || || |||| |||||||| |||||||| || || |||| Sbjct 42882 CCCTCAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGA---AGAGTTCTTGTCCTGG 42938 Query 126224 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 126283 | |||||| || ||||||| ||||| || || || |||| |||| || || | Sbjct 42939 ATCCACTTGATGGCCCACTCGGCCTTCTTGCGAATGCAAGGGATAGTCTCAATAGCGTTG 42998 Query 126284 AAGAGTTCCTTCTTTTCTGATG-GATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 126342 ||||| | | | | || | || |||| ||| | || ||||| || ||||| Sbjct 42999 AAGAGGTAGGTGCGCT-GGCTGTGCTCCTTGACGTAGGTGTCGATGAGCAGAGAGTATGT 43057 Query 126343 TTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTA 126401 ||| ||||| | | ||| || | ||| | ||||||| | || || ||| | Sbjct 43058 CTCGGAGTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCATCGAGCCTCGGGGA 43116 Query 126402 TCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAG 126461 |||| ||||| || ||| | | ||||| ||||| || || || ||| Sbjct 43117 TCTGAACCTCGCCGCTGAAACGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGAGGCAG 43176 Query 126462 CAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCC 126518 |||| || |||||||| | ||||| | || || | ||||||| || | |||| Sbjct 43177 CAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCC 43236 Query 126519 AGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 |||||| | |||||| || ||||| | |||||| || ||||| Sbjct 43237 AGTCGTGCAAATCCTTGGACAGATCAATCTCCTCGGCGGTCCA 43279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597342855102120