Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq135 221 1e-52
>seq135
Length=88816
Score = 221 bits (244), Expect = 1e-52
Identities = 610/925 (66%), Gaps = 10/925 (1%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||| | |||||| || |||||| || || ||||| ||| | ||||||
Sbjct 30403 AACTACCAATACTTCGGCTTCAAGACCCTGGAGCGATCATATCTCCTGAAGCTTGATGGC 30344
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || ||||| || || || || | ||||| || || | || ||| || ||
Sbjct 30343 AAGATTGTTGAGCGGCCACAGCACATGATTATGCGAGTGGCTGTTGGCATTTGGGGAGAC 30284
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
|||| | ||| | | | | | |||| ||| | |||| ||
Sbjct 30283 AACATTGAGCGTGTCCTTGAGACATACCACCTCATGTCCAGCAAATTCTTTACCCATGCG 30224
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953
|||| ||||| |||||||| || |||||| | ||| | || || || ||| || |
Sbjct 30223 TCCCCCACCCTCTTCAACGCTGGTACCCCGCAAGCTCAGCTCTCCTCATGCTTCTTGGTT 30164
Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013
||| | |||| |||| ||| || || | ||| | | ||| ||||| | ||
Sbjct 30163 GAC-ATGAAGGACGACAGCATTGAGGGTATCTACGATACTTTGAAGACATGTGCCATGAT 30105
Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCC 94071
|| || || || || ||||| ||| |||||| |||| ||||||| || ||
Sbjct 30104 TTCCAAGATGGCTGGTGGTATCGGCCTCAACGTCCAC--CGTATCCGTGCCACAGGCTCT 30047
Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131
|| ||| ||| || || || ||||||||||| || |||| ||||| || |||||||||
Sbjct 30046 TATATCGCCGGCACAAACGGTACCTCCAACGGTATCATCCCCATGCTTCGTGTCTTCAAC 29987
Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191
||| | || | ||||| ||||||||||| | | | ||| | || || ||||
Sbjct 29986 AACACTGCCAGATACGTCGACCAGGGTGGAAACAAGCGTCCTGGTGCCTTTGCCATCTAC 29927
Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251
|||||||| |||||||| || || | ||| | ||||| || ||||||||||||||
Sbjct 29926 CTCGAGCCTTGGCACGCCGATGTCTTTGAGTTCCTTGACCTCCGCAAGAACCACGGCAAG 29867
Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311
|| || | ||| | ||||| ||| |||||||||| | || || || || |||||
Sbjct 29866 GAAGAGGTCCGTGCCCGTGACCTGTTCCTCGCTCTCTGGATCCCTGATCTGTTCATGAAG 29807
Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371
||||||||||| |||| | |||| | | | || || |||||||| || || || |
Sbjct 29806 CGCGTCGAGAAGAACTTGGATTGGACTTTGATGTGCCCTAATGAATGCCCTGGCCTTGCT 29747
Query 94372 GACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CAAGGC 94430
||| | ||| | || || | |||||| || || | |||| | ||
Sbjct 29746 GACTGCTATGGCGAGGAATTCGAGGCTCTGTATGAGAAGTATGAGAAGGAGGGACGTGGT 29687
Query 94431 CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGAC 94490
| | ||| ||| ||| |||||||||| | ||| |||| | ||| |||||
Sbjct 29686 C-GCAAGACTATCCGAGCTCAGAAGCTGTGGTACTCTATCCTGGAGGCCCAGACTGAGAC 29628
Query 94491 GGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549
|||| |||| ||| | | |||||| ||| |||| |||| ||||||| || |||
Sbjct 29627 TGGTAACCCCTTCATGCTCTACAAGGATAGCTG-CAACCGCAAGAGCAACCAGAAGAACC 29569
Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609
| || ||| ||||| || || ||||| |||||| | ||||| || | || || |
Sbjct 29568 TGGGAACCATCCGCAGCTCCAACCTCTGCACTGAGATTATTGAGTACTCTGCGCCTGATG 29509
Query 94610 AGATTGCTGTGTGTAACCTGGGCTC 94634
|| | ||||| || ||| ||| |||
Sbjct 29508 AGGTCGCTGTCTGCAACTTGGCCTC 29484
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494714301166440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |