Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq135 237 2e-57
seq219 152 6e-32
>seq135
Length=88816
Score = 237 bits (262), Expect = 2e-57
Identities = 1175/1841 (64%), Gaps = 61/1841 (3%)
Strand=Plus/Plus
Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585
||||||| || ||| ||| ||||| | || ||||||||||| || |||||||| |
Sbjct 28573 TGAACTGGATAGGTGCAGCCGCGGCCTGGGTACGCAGGTAGTACATGCCAGTCTTGAGAC 28632
Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 115645
| |||||||| || | |||||| || | |||| | ||| ||| | ||||
Sbjct 28633 CAAGCTTCCAGCCAGTGAAATGCATGCTGGTAATCTTGCCCATTGTGGGATCCTTCATGT 28692
Query 115646 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 115705
|| ||||| ||||| ||||| ||||| || || || || | ||| | | ||
Sbjct 28693 GGATGTTCAAGGACTGGGACTGATCAATGAAAGCACCACGGTCGGCTGACATCTGGA-CA 28751
Query 115706 CATCCTTCATCTTGA----TTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 115761
|| || | |||| | ||||| ||||| |||| ||| ||| || || | ||
Sbjct 28752 -AT--TTGACGTTGAGAAATCTCCCAAACAGTCTTGTACAGGGCCTTGATGTCGGCGGGA 28808
Query 115762 ATATCCACGATATTTTGGATAGAGCCAC---CTGCCTTGACCATGAGATCCTTCATATCC 115818
|| | || || ||||||||||| | || ||| || | | ||||||| |
Sbjct 28809 ATGTTGGGAATGTTCTGGATAGAGCCGTTCTCAGCAATGA---TGCGGTTCTTCATAGCA 28865
Query 115819 TTTGACCAGAGACCAATCTTCTTGAGATCCTCCA----CGAGGTGCTTATTGACAACAAC 115874
| ||||| || || | | ||||||| | | ||| | ||||||||
Sbjct 28866 TCGGACCAAAGGCCGGTATCGACAAGATCCTTGAGAAGCCAGGGG----TTGACAACCTG 28921
Query 115875 AAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTC 115934
||||| || || ||| |||| | | |||||||||| ||||| |||||||| |||||
Sbjct 28922 GAACTCGCCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCAAAACACTC 28981
Query 115935 ATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994
|||||||||||||| |||| ||| ||| |||||||| || || | ||| | ||||||
Sbjct 28982 GTTGTTACCCAAGATCTGGGAAGTGCTGGCAGTGGGCATAGGGGCGACGAGCAAGCTGTT 29041
Query 115995 GCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGT 116054
||| ||||| | || |||| | |||||||| | ||||| || | | | |
Sbjct 29042 GCGAAGACCGTGCTCCTTAATTTGCTCCTTGAGCGAATCCCACTCCCACAGGTCGGTGGG 29101
Query 116055 CTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGT 116114
|| | |||||||| ||| | || || || |||| || || || ||||||| ||||
Sbjct 29102 CTTGACATCCCACATGTCATATTGAAGAATGCCTTCAGAGGCGGGTGATCCCTTGAATGA 29161
Query 116115 CTCATATGGGCCCTCAACCTCCGCCAATTC---GGAGCTCGCCTCGAGGGCTGCGTGATA 116171
| ||| || || ||||||| || | || ||| ||||| ||||| || || ||
Sbjct 29162 CGAATAAGGACCTTCAACCTTGGCAATCTCCATAGAG---GCCTCAAGGGCAGCATGGTA 29218
Query 116172 CATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACG 116231
|| |||||||| || | |||| | || ||| || || || | ||||
Sbjct 29219 GATGGTCTCAAAGATTTGCTTGTTCAGCTCACGAGCTTCGGGTGATTCGAAGGGAAGAC- 29277
Query 116232 GCACA-AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCA 116290
||| | || || |||| || || || |||||||| | ||||| || || || |
Sbjct 29278 GCAGAGCAAGGAAAGCATCAGCAAGTCCCTGGACACCAACACCAATGGGTCGGTGACGGC 29337
Query 116291 TATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGAT 116350
| || || ||||| || || || || | ||| |||||| | | || || |
Sbjct 29338 TGTTGCTGTTGCGAGCCTCCTGAACAGGGTAGTAGTTCACATCGATGATGCGGTTGAGGT 29397
Query 116351 TTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTT 116410
| | || |||||||| | ||| |||||||||| | ||| | | | | |
Sbjct 29398 TACGGACAACCACCTTTGTAACTTCGTGAAGCTTTTTAAAGTCATAGCATCCTTCGTTGT 29457
Query 116411 CATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTAT 116470
| |||| | ||| || || | || |||| || || |||| | ||||||
Sbjct 29458 AGTCGACAAAAGCAGGGAGAGCCAAAGAGGCCAAGTTGCAGACAGCGACCTCATCAGGCG 29517
Query 116471 CAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTT 116530
||| |||||| ||||| || || || | || || || ||||| |||| |||||| |
Sbjct 29518 CAGAGTACTCAATAATCTCAGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCT 29577
Query 116531 GATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTT 116590
| || ||| ||| || ||||||||||||||| | || | || ||||| || |
Sbjct 29578 GGTTGCTCTTGCGGTTGCAGCTATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCT 29637
Query 116591 GGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCC 116649
||| || || |||| | ||| | | || | ||| | | ||| | | || |||
Sbjct 29638 GGGCCTCCAGGATAGAGTACCACAGCTTCTG-AGCTCGGATAGTCTTGCGACCACGTCCC 29696
Query 116650 TCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAGAGCCC 116708
|||| ||| ||||| || || ||||| || || || ||| ||| || | || ||
Sbjct 29697 TCCTTCTCATACTTCTCATACAGAGCCTCGAATTCCTC-GCCATAGCAGTCAGCAAGGCC 29755
Query 116709 TGGTGCCTT-ATCTGGACAGAAGAGAGACCATTGACCA--CCCTCCTCAACCCGCTTCAT 116765
|| || || || || || | | || ||| | ||| || ||| || ||||||||
Sbjct 29756 AGG-GCATTCATTAGGGCACATCAAAGTCCAAT--CCAAGTTCTTCTCGACGCGCTTCAT 29812
Query 116766 GAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCC 116825
||| || || ||||||||||| || ||| || || || || | ||||| | ||
Sbjct 29813 GAACAGATCAGGGATCCAGAGAGCGAGGAACAGGTCACGGGCACGGACCTCTTCCTTGCC 29872
Query 116826 CTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACAC 116885
|| || || | || | || || | || ||| |||||||| || || ||||| |
Sbjct 29873 GTGGTTCTTGCGGAGGTCAAGGAACTCAAAGACATCGGCGTGCCAAGGCTCGAGGTAGAT 29932
Query 116886 CGCGATTG-AC-----CCCTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTT 116939
|| | | || | |||| ||| |||||| || || || || || |||
Sbjct 29933 GGCAAAGGCACCAGGACGCTTG---TTTCCACCCTGGTCGACGTATCTGGCAGTGTTGTT 29989
Query 116940 AAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGA 116997
|| || |||||||| || |||||||| | || || ||||| || ||| ||| ||
Sbjct 29990 GAAGACACGAAGCATGGGGATGATACCGTTGGAGGTACCGTTTGTGCCGGCGATATAAGA 30049
Query 116998 GACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATT 117057
| || |||| | || | ||||| || | || ||||| || ||| ||| || ||
Sbjct 30050 GCCT--GTGGCACGGATACGGTGGACGTTGAGGCCGATACCACCAGCCATCTTGGAAATC 30107
Query 117058 TGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATG 117117
|| || | | | | | ||||||| || || || ||| |||| | | |
Sbjct 30108 ATGGCACATGTCTTCAAAGTATCGTAGATACCCTCAATGCTGTCGTCCTTCATGTCAACC 30167
Query 117118 AGGAAGCAGCTCGACATTTGTGGCCTT--GGTGTACCAGCGTTGAAGAGGGTTGGTGTCG 117175
| |||||| || | || | ||| || |||||||||||||||||||| || | ||
Sbjct 30168 AAGAAGCATGAGGAGAGCTGAG--CTTGCGGGGTACCAGCGTTGAAGAGGGTGGGGGACG 30225
Query 117176 CGTGGATGAACA--TACCTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTC 117233
| ||| | || | | || |||||| | ||| ||||| | |||| |||||
Sbjct 30226 CATGGGTAAAGAATTTGCT--GGACATGAGGTGGTATGTCTCAAGGACACGCTCAATGTT 30283
Query 117234 TTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGAT 117293
|| || ||| || | | || ||||||| ||||| || || || | | |
Sbjct 30284 GTCTCCCCAAATGCCAACAGCCACTCGCATAATCATGTGCTGTGGCCGCTCAACAATCTT 30343
Query 117294 ACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGA 117334
||||| ||| || |||| || ||||| ||||||||
Sbjct 30344 GCCATCAAGCTTCAGGAGATATGATCGCTCCAGGGTCTTGA 30384
>seq219
Length=54288
Score = 152 bits (168), Expect = 6e-32
Identities = 350/521 (67%), Gaps = 7/521 (1%)
Strand=Plus/Plus
Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578
|||||| || ||| |||||||||||||| |||||||| || || |||||| ||||||
Sbjct 42761 AGCAAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACC 42820
Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638
||||||||||| | |||||| | |||||| || | ||| | || |||||||||
Sbjct 42821 AGGCATGAGACCTCTCTTCTTGAGCCAGAAGATGGAGGCAAAGGCTCCGCTGAAGAAGAT 42880
Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAA 127698
||||| ||| || || |||| ||||||| ||||||||| | ||| | |
Sbjct 42881 ACCCTCAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAAGAGTTCTTGTCCTGGAT 42940
Query 127699 CCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAA 127758
|||||| || ||||||| ||||| || || || |||| |||| || || | ||
Sbjct 42941 CCACTTGATGGCCCACTCGGCCTTCTTGCGAATGCAAGGGATAGTCTCAATAGCGTTGAA 43000
Query 127759 GAGTTCCTTCTTTTCTGATG-GATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTT 127817
||| | | | | || | || |||| ||| | || ||||| || ||||| |
Sbjct 43001 GAGGTAGGTGCGCT-GGCTGTGCTCCTTGACGTAGGTGTCGATGAGCAGAGAGTATGTCT 43059
Query 127818 CGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATC 127876
|| ||||| | | ||| || | ||| | ||||||| | || || ||| |||
Sbjct 43060 CGGAGTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCATCGAGCCTCGGGGATC 43118
Query 127877 TGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCA 127936
|| ||||| || ||| | | ||||| ||||| || || || |||||
Sbjct 43119 TGAACCTCGCCGCTGAAACGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGAGGCAGCA 43178
Query 127937 AAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAG 127993
|| || |||||||| | ||||| | || || | ||||||| || | ||||||
Sbjct 43179 AAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCAG 43238
Query 127994 TCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
|||| | |||||| || ||||| | |||||| || |||||
Sbjct 43239 TCGTGCAAATCCTTGGACAGATCAATCTCCTCGGCGGTCCA 43279
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613496164539240
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