Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq54 214 2e-50
seq135 84.2 3e-11
>seq54
Length=139347
Score = 214 bits (236), Expect = 2e-50
Identities = 461/688 (67%), Gaps = 6/688 (1%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||| |||||||||||||| || || || || || | ||||| || ||||||||
Sbjct 63108 TCGAAATCCTCACCACCCAAGTGAGTGTCACCGGCAGTGGACTTGACCTCGAAGATACCC 63049
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| |||||| | | | |||||||| || ||||||||||| || || || ||||| |||
Sbjct 63048 TCCTCAATGGTCAGGAGAGAAACATCGAAAGTACCACCACCAAGATCGAAGATGAGGACG 62989
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| | || ||||| || |||||||| || || || || || || || ||
Sbjct 62988 TTGCGCTCGCCCTCGACCTTCTTGTCAAGACCGTAGGCAATGGCAGCAGCGGTGGGCTCG 62929
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| || ||||| || ||| || || ||||| | || || || || || || ||
Sbjct 62928 TTGATGATACGCAGGACGTTGAGACCGGCAATGAGACCGGCGTCCTTGGTAGCCTGACGC 62869
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| ||||| |||||||| ||||| || | ||| |||| |||| | || ||
Sbjct 62868 TGGCTGTCGTTGAAGTAGGCGGGGACAGTGATGACGGCGTTGTTGACGGTGCCGCCCAGG 62809
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|| | || ||| | || ||| ||||| || | ||| || || ||||| || | |
Sbjct 62808 TAGGCCTCGGCGGTCTCACGCATCTTGGTCAGGATCATGGAGGAGATCTCCTCGGGGGTG 62749
Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876
|| || || || || || || || || || | | ||| || | || | |
Sbjct 62748 AAGGTCTTGGTCTCGCCCTTGAACTCGACCTCGACGACGGGCTT---GGAGGCCTTGTCG 62692
Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936
| | ||| | | | | |||||||| | || |||| ||| | ||||| |
Sbjct 62691 ACGATCTTGAAGGGGAAGTGCTTCATATCAGCCTGAACCTCGGCGTCGGCGAACTTGCGA 62632
Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996
|| || | ||||| || || || || ||||| | |||||||||||| ||||||||
Sbjct 62631 CCAATCAATCGCTTGGCGTCGAAGACGGTGTTCTGGGGGTTCATGGCGACCTGGTTCTTG 62572
Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056
|| || || || || ||||| || | || || || || ||| |||| |||||||||
Sbjct 62571 GCGGCATCACCAATCAGACGCTC---GGTGTCGGTGAAGGCAACGAACGAAGGGGTCGTT 62515
Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116
|| || || |||||||| ||||| || || ||||| | | ||| ||||||||
Sbjct 62514 CGGTTACCCTGGTCGTTGGCAATGATATCACACCGGTCCTCACGGAAGATACCGACGCAA 62455
Query 8117 GAATACGTTGTTCCTAAATCAATACCGA 8144
|| ||||| || || | || |||||||
Sbjct 62454 GAGTACGTAGTACCCAGGTCGATACCGA 62427
>seq135
Length=88816
Score = 84.2 bits (92), Expect = 3e-11
Identities = 331/519 (64%), Gaps = 9/519 (2%)
Strand=Plus/Plus
Query 105559 TCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTC 105618
|| ||||| |||||||||| ||| || ||||| | || || ||||| || |
Sbjct 29799 TCGACGCGCTTCATGAACAGATCAGGGATCCAGAGAGCGAGGAACAGGTCACGGGCACGG 29858
Query 105619 GCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCAT 105678
||||||| | || || ||| || | || || || || | | ||||||||||||
Sbjct 29859 ACCTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAACTCAAAGACATCGGCGTGCCAA 29918
Query 105679 GGTTCTAAATAGACTGCAATAGACCCTTTACGACGC------CCCGCTTGATTGACATAT 105732
|| || | |||| |||| || | | | ||||| || | || | ||| |||
Sbjct 29919 GGCTCGAGGTAGATGGCAA-AGGCAC--CAGGACGCTTGTTTCCACCCTGGTCGACGTAT 29975
Query 105733 CTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGTT 105792
|| || || ||| | || || | ||| || || ||||| | ||| || || |||||
Sbjct 29976 CTGGCAGTGTTGTTGAAGACACGAAGCATGGGGATGATACCGTTGGAGGTACCGTTTGTG 30035
Query 105793 CCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGCC 105852
|| |||| || | ||||| | | ||| |||| | || ||||| ||||||
Sbjct 30036 CCGGCGATATAAGAGCCTGTGGCACGGATACGGTGGACGTTGAGGCCGATACCACCAGCC 30095
Query 105853 CACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTCC 105912
||| || ||||| || | |||||||| ||||| || || || || |||
Sbjct 30096 ATCTTGGAAATCATGGCACATGTCTTCAAAGTATCGTAGATACCCTCAATGCTGTCGTCC 30155
Query 105913 TTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTACCAGCATTGAACAGA 105972
|| | ||| || ||| || || || | || | | || |||||||| ||||| ||
Sbjct 30156 TTCATGTCAACCAAGAAGCATGAGGAGAGCTGAGCTTGCGGGGTACCAGCGTTGAAGAGG 30215
Query 105973 GTTGGTGTTGCATGAATGAACAAACCTTTCGATAACGCTTCGTATGTTTCCAGGACGTGA 106032
|| || | ||||| | || || | || | | |||||| || ||||| |
Sbjct 30216 GTGGGGGACGCATGGGTAAAGAATTTGCTGGACATGAGGTGGTATGTCTCAAGGACACGC 30275
Query 106033 TCAATATCGTGTCCATGAATACCAATAGCGACGCGCATA 106071
||||| | || ||| ||| |||| ||| || ||||||
Sbjct 30276 TCAATGTTGTCTCCCCAAATGCCAACAGCCACTCGCATA 30314
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635121375548760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |