Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06- 08] 1,439 sequences; 37,686,724 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq135 264 1e-65 seq219 152 6e-32 seq18 141 1e-28 seq85 82.4 9e-11 >seq135 Length=88816 Score = 264 bits (292), Expect = 1e-65 Identities = 931/1432 (65%), Gaps = 29/1432 (2%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 |||||| ||||| | ||||| || || | || || || || | ||||| ||| Sbjct 30328 CCACAGCACATGATTATGCGAGTGGCTGTTGGCATTTGGGGAGACAACATTGAGCGTGTC 30269 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | ||||||||| || |||||| | | || | ||| || | || ||||||||| Sbjct 30268 CTTGAGACATACCACCTCATGTCCAGCAAATTCTTTACCCATGCGTCCCCCACCCTCTTC 30209 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 ||||||||||| || | | || | ||| || ||| | ||| | ||||| || Sbjct 30208 AACGCTGGTACCCCGCAAGCTCAGCTCTCCTCATGCTTCTTGGTTGACATGAAGGACGAC 30149 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 || | || || |||| ||| | | ||||||| || || ||| ||||||| Sbjct 30148 AGCATTGAGGGTATCTACGATACTTTGAAGACATGTGCCATGATTTCCAAGATGGCTGGT 30089 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAG-TCTCGTATTAGAGGTACAAA 111910 |||||||| | || |||| | || | |||| || | ||| ||| || ||||| Sbjct 30088 GGTATCGGCCTCAACGTCCACCGTATCCGTGCCA-CAGGCTCTTATATCGCCGGCACAAA 30030 Query 111911 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 111970 ||| || | ||||| || || |||||||| || || ||| ||| || | || || Sbjct 30029 CGGTACCTCCAACGGTATCATCCCCATGCTTCGTGTCTTCAACAACACTGCCAGATACGT 29970 Query 111971 AAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 112024 |||| | ||| ||||| || | | || |||| || ||||| ||||| Sbjct 29969 CGACCAGGGTGGAAACAAGCGTCCT---GGTGCCTTTGCCATCTACCTCGAGCCTTGGCA 29913 Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTG 112084 ||| ||| || | ||||||||||| | || ||||| || | || |||| || Sbjct 29912 CGCCGATGTCTTTGAGTTCCTTGACCTCCGCAAGAACCACGGCAAGGAAGAGGTCCGTGC 29853 Query 112085 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 112144 ||| || || ||| |||||||||||| || ||||| ||||||||| | || ||| ||| Sbjct 29852 CCGTGACCTGTTCCTCGCTCTCTGGATCCCTGATCTGTTCATGAAGCGCGTCGAGAAGAA 29793 Query 112145 --TGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGA-TGCCGTGG 112200 ||| ||||| || | | || || | || || || || || | || ||| ||| Sbjct 29792 CTTGG--ATTGGACTTTGATGTGCCCTAATGAATGC-CCTGGCCTTGCTGACTGCTATGG 29736 Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GAC 112258 ||||| || || || || || ||||| ||| | || | || | | | || ||| Sbjct 29735 C-GAGGAATTCGAGGCTCTGTATGAGAAGTATGAGAAGGAGGGACGTG-GTC-GCAAGAC 29679 Query 112259 GGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 112317 | | |||| | || | ||||| | |||| || || | || || |||||||||| | Sbjct 29678 TATCCGAGCT-CAGAAGCTGTGGTACTCTATCCTGGAGGCCCAGACTGAGACTGGTAACC 29620 Query 112318 CATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 112377 | | ||||| ||||| || ||| |||| ||||| || || ||||| |||| | Sbjct 29619 CCTTCATGCTCTACAAGGATAGCTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAACCA 29560 Query 112378 TCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 112437 || || ||||||||||| || || || | || | | | |||||| |||| Sbjct 29559 TCCGCAGCTCCAACCTCTGCACTGAGATTATTGAGTACTCTGCGCCTGATGAGGTCGCTG 29500 Query 112438 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT-T 112496 | || ||| | || || | |||||||| | ||| || | | | || || | | Sbjct 29499 TCTGCAACTTGGCCTCTTTGGCTCTCCCTGCTTTTGTCGA-CTACAACGAAGGATGCTAT 29441 Query 112497 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATT 112556 || | | |||| || ||||||||||| || || ||||| ||| | | || Sbjct 29440 GACTTTAAAAAGCTTCACGAAGTTACAAAGGTGGTTGTCCGTAACCTCAACCGCATCATC 29381 Query 112557 GATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 112616 ||| || | ||||| ||| || ||||| || || | | ||||| || ||| Sbjct 29380 GATGTGAACTACTACCCTGTTCAGGAGGCTCGCAACAGCAACAGCCGTCACCGACCCATT 29321 Query 112617 GGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTC 112675 ||| | |||||||| || || || |||| ||| || || || || | | || || || Sbjct 29320 GGTGTTGGTGTCCAGGGACTTGCTGATGCTTTCCTTGCTCTG-CGTCTTCCCTTCGAATC 29262 Query 112676 CGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA 112735 |||||| || | || || || |||||||| || || || || || ||||| Sbjct 29261 ACCCGAAGCTCGTGAGCTGAACAAGCAAATCTTTGAGACCATCTACCATGCTGCCCTTGA 29202 Query 112736 GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 112795 ||| | |||| | || ||||||| ||||| ||| | || |||| || || || Sbjct 29201 GGCCTCTATGGAGATTGCCAAGGTTGAAGGTCCTTATTCGTCATTCAAGGGATCACCCGC 29142 Query 112796 TTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTG 112855 || |||| | ||||||| ||| |||||||| | || ||| | | || || Sbjct 29141 CTCTGAAGGCATTCTTCAATATGACATGTGGGATGTCAAGCCCACCGACCTGTGGGAGTG 29082 Query 112856 GGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACC 112915 ||| | |||||||| | || |||||| | |||||||| ||||| | | | || || Sbjct 29081 GGATTCGCTCAAGGAGCAAATTAAGGAGCACGGTCTTCGCAACAGCTTGCTCGTCGCCCC 29022 Query 112916 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 112975 ||||| || ||| ||| | || ||||||||||| || || || ||||| |||||||| Sbjct 29021 TATGCCCACTGCCAGCACTTCCCAGATCTTGGGTAACAACGAGTGTTTTGAGCCCTACAC 28962 Query 112976 GACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 113027 | |||||||| | | || | ||| || || ||||| | |||||||| Sbjct 28961 CTCCAACATCTACCAGCGACGTGTCCTTGCTGGCGAGTTCCAGGTTGTCAAC 28910 >seq219 Length=54288 Score = 152 bits (168), Expect = 6e-32 Identities = 355/523 (68%), Gaps = 13/523 (2%) Strand=Plus/Minus Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 101873 ||||| || || ||| | ||||| || ||||||||| |||| ||||| | | | || Sbjct 43279 TGGACCGCCGAGGAGATTGATCTGTCCAAGGATTTGCACGACTGGAACAACCGCCTGAAC 43220 Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933 || | || ||| | ||||| |||||||||| |||||||||| || || || ||| Sbjct 43219 GATGACGAGAAGTACTTCATCTCTCACATCCTGGCCTTCTTTGCTGCCTCGGACGGCATT 43160 Query 101934 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 101992 || ||||| | | || | ||||| || |||| | || || ||| Sbjct 43159 GTCAACGAGAACCTGGTCGAGCGTTTCAGCGGCGAGGTTCAGATCCCC-GAGGCTCGATG 43101 Query 101993 TTTCTATGCGTATCAATGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCA 102051 ||||| | || || | |||| ||| | | | || ||||||||| | |||| Sbjct 43100 CTTCTACG-GTTTCCAGATCATGATGGAGAACATCCACTCCGAGACATACTCTCTGCTCA 43042 Query 102052 TAGACAAGTATATTAAGGATGGTGCTGAGAA-GAAGC-AGCTCTTTGAAGCCATCCAAAC 102109 | |||| || | ||||| | | | | | | | | ||||| | || || | || Sbjct 43041 TCGACACCTACGTCAAGGA--GCACAGCCAGCGCACCTACCTCTTCAACGCTATTGAGAC 42984 Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 102168 | || || |||| ||||| || || ||||| || |||||| | | |||| | | Sbjct 42983 TATCCCTTGCATTCGCAAGAAGGCCGAGTGGGCCATCAAGTGGATCCAGGACAAGAACTC 42924 Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228 ||||||||| |||| ||| | || ||||| ||||||||||||||||||| || Sbjct 42923 -TTCCTTTGCCCAGCGTCTCGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGAG 42865 Query 102229 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 102288 |||| | | || | |||||||||||| ||||||||||||| ||||| |||||||| Sbjct 42864 CCTTTGCCTCCATCTTCTGGCTCAAGAAGAGAGGTCTCATGCCTGGTCTGACCTTCTCCA 42805 Query 102289 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||||| ||||||||||||||||| || ||| || ||||| Sbjct 42804 ACGAGCTCATCTCTCGTGACGAGGGTCTGCACACTGACTTTGC 42762 >seq18 Length=239243 Score = 141 bits (156), Expect = 1e-28 Identities = 284/414 (69%), Gaps = 18/414 (4%) Strand=Plus/Plus Query 15887 ATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGC 15946 ||||||||| || || || | || || | || ||||| ||| | ||||| || |||| Sbjct 111133 ATCAAAGCGGCCAGGACGCATCAGGGCCTTGTCCAGGATGTCAGCACGATTGGTACCGGC 111192 Query 15947 GATGACAACAATACCTGTT-TCGT-TATCAAAACCATCCATCTCTGTCAAAAGCTGGTTA 16004 | |||||| | |||||| ||| | | || || ||||| ||||| | || ||||||| Sbjct 111193 CAAGACAACGA--CCTGTTCTCGAGTGTTGAATCCGTCCATTTCTGTGAGAATCTGGTTA 111250 Query 16005 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCC--CA 16062 | || ||| ||||| ||||| | | |||| | | || || || || || Sbjct 111251 AGGGTAGCTTCGCGTTCGTCATTTCCACCGAATCCACGACCGCT---TTCCTGTCGAGCA 111307 Query 16063 CGGC-------ATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACT 16115 |||| ||| || || |||||||||| |||||| || ||| | ||| | | Sbjct 111308 CGGCCGATAGCATCGATTTCGTCAATGAAGATGATGCAAGGCGCATTCTTTCGACCTTCG 111367 Query 16116 TCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCG 16175 |||| || || ||||| || | ||||| ||||| ||||||||||| || | | Sbjct 111368 GCAAACAGGTCTCGTACTCGAGACGGACCCACGCCAACGAACATCTCCACGAACTCAGAA 111427 Query 16176 GCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGT 16234 || || || | ||| ||||| ||| || || ||| |||| |||||||||||| Sbjct 111428 CCGCTCACGCTGAA-GAATGGGACGCCAGACTCTCCAGCAGTGGCCTTGGCGAGAAGAGT 111486 Query 16235 CTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 ||| ||||| ||||| || | ||||| ||||||||| |||||||||||||| Sbjct 111487 CTTTCCCGTTCCTGGGGGGCCGGAGAGGATGGCACCTCGAGGAATCTTGGCGCC 111540 >seq85 Length=118840 Score = 82.4 bits (90), Expect = 9e-11 Identities = 196/295 (66%), Gaps = 6/295 (2%) Strand=Plus/Plus Query 176036 AGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATTGTTTGAACCCATGTAG 176095 || || | |||||| | ||||| ||||| || | |||||||||||||| |||| | Sbjct 54187 AGTCGAGAACCAAAGTTACCACTGGGCTCGAGGACGTTGATATTGTTTGAGCCCACAAAA 54246 Query 176096 TCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACTTCACCGTGGTGGTACGCACTC 176155 || | ||||| | ||||| | | || || ||||||||||||||||| ||| || Sbjct 54247 TCTTGAGCCAATCCAATGATCGTCTGCTGCAGTGAAACTTCACCGTGGTGGTAGGCAGTC 54306 Query 176156 TTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTCATCCTTG---AGATTCTTG 176212 | | ||| | | |||| || |||| | ||||||| ||| | ||| | Sbjct 54307 AGACCAGAGACGTAACCAGCCA---GCTCCACAACCTTCTCATCTTTGACCACGTTCCTC 54363 Query 176213 TGGAAACATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCATCCGCCATGTGTGCG 176272 | |||||| ||||| | ||||| ||||| |||||| | ||||| ||| | | Sbjct 54364 TTGAAACAGGCGTATAGCACCTTTCGTTGACCAGGCTTCAATCCATCAATCATCGACGGG 54423 Query 176273 ATAGAACGCTTCAAGTCCGCCAAACTGAAGTTGACGAGGTCCTTGTGTACAAAGT 176327 || || | | ||||||| |||||| | ||| ||||||| ||||||| Sbjct 54424 ATGGATCTTATGTTATCCGCCATACTGAACAGAATGAGCTCCTTGTTCACAAAGT 54478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620731234396080