Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq135 264 1e-65
seq219 152 6e-32
seq18 141 1e-28
seq85 82.4 9e-11
>seq135
Length=88816
Score = 264 bits (292), Expect = 1e-65
Identities = 931/1432 (65%), Gaps = 29/1432 (2%)
Strand=Plus/Minus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|||||| ||||| | ||||| || || | || || || || | ||||| |||
Sbjct 30328 CCACAGCACATGATTATGCGAGTGGCTGTTGGCATTTGGGGAGACAACATTGAGCGTGTC 30269
Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731
| ||||||||| || |||||| | | || | ||| || | || |||||||||
Sbjct 30268 CTTGAGACATACCACCTCATGTCCAGCAAATTCTTTACCCATGCGTCCCCCACCCTCTTC 30209
Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791
||||||||||| || | | || | ||| || ||| | ||| | ||||| ||
Sbjct 30208 AACGCTGGTACCCCGCAAGCTCAGCTCTCCTCATGCTTCTTGGTTGACATGAAGGACGAC 30149
Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851
|| | || || |||| ||| | | ||||||| || || ||| |||||||
Sbjct 30148 AGCATTGAGGGTATCTACGATACTTTGAAGACATGTGCCATGATTTCCAAGATGGCTGGT 30089
Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAG-TCTCGTATTAGAGGTACAAA 111910
|||||||| | || |||| | || | |||| || | ||| ||| || |||||
Sbjct 30088 GGTATCGGCCTCAACGTCCACCGTATCCGTGCCA-CAGGCTCTTATATCGCCGGCACAAA 30030
Query 111911 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 111970
||| || | ||||| || || |||||||| || || ||| ||| || | || ||
Sbjct 30029 CGGTACCTCCAACGGTATCATCCCCATGCTTCGTGTCTTCAACAACACTGCCAGATACGT 29970
Query 111971 AAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 112024
|||| | ||| ||||| || | | || |||| || ||||| |||||
Sbjct 29969 CGACCAGGGTGGAAACAAGCGTCCT---GGTGCCTTTGCCATCTACCTCGAGCCTTGGCA 29913
Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTG 112084
||| ||| || | ||||||||||| | || ||||| || | || |||| ||
Sbjct 29912 CGCCGATGTCTTTGAGTTCCTTGACCTCCGCAAGAACCACGGCAAGGAAGAGGTCCGTGC 29853
Query 112085 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 112144
||| || || ||| |||||||||||| || ||||| ||||||||| | || ||| |||
Sbjct 29852 CCGTGACCTGTTCCTCGCTCTCTGGATCCCTGATCTGTTCATGAAGCGCGTCGAGAAGAA 29793
Query 112145 --TGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGA-TGCCGTGG 112200
||| ||||| || | | || || | || || || || || | || ||| |||
Sbjct 29792 CTTGG--ATTGGACTTTGATGTGCCCTAATGAATGC-CCTGGCCTTGCTGACTGCTATGG 29736
Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GAC 112258
||||| || || || || || ||||| ||| | || | || | | | || |||
Sbjct 29735 C-GAGGAATTCGAGGCTCTGTATGAGAAGTATGAGAAGGAGGGACGTG-GTC-GCAAGAC 29679
Query 112259 GGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 112317
| | |||| | || | ||||| | |||| || || | || || |||||||||| |
Sbjct 29678 TATCCGAGCT-CAGAAGCTGTGGTACTCTATCCTGGAGGCCCAGACTGAGACTGGTAACC 29620
Query 112318 CATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 112377
| | ||||| ||||| || ||| |||| ||||| || || ||||| |||| |
Sbjct 29619 CCTTCATGCTCTACAAGGATAGCTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAACCA 29560
Query 112378 TCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 112437
|| || ||||||||||| || || || | || | | | |||||| ||||
Sbjct 29559 TCCGCAGCTCCAACCTCTGCACTGAGATTATTGAGTACTCTGCGCCTGATGAGGTCGCTG 29500
Query 112438 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT-T 112496
| || ||| | || || | |||||||| | ||| || | | | || || | |
Sbjct 29499 TCTGCAACTTGGCCTCTTTGGCTCTCCCTGCTTTTGTCGA-CTACAACGAAGGATGCTAT 29441
Query 112497 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATT 112556
|| | | |||| || ||||||||||| || || ||||| ||| | | ||
Sbjct 29440 GACTTTAAAAAGCTTCACGAAGTTACAAAGGTGGTTGTCCGTAACCTCAACCGCATCATC 29381
Query 112557 GATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 112616
||| || | ||||| ||| || ||||| || || | | ||||| || |||
Sbjct 29380 GATGTGAACTACTACCCTGTTCAGGAGGCTCGCAACAGCAACAGCCGTCACCGACCCATT 29321
Query 112617 GGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTC 112675
||| | |||||||| || || || |||| ||| || || || || | | || || ||
Sbjct 29320 GGTGTTGGTGTCCAGGGACTTGCTGATGCTTTCCTTGCTCTG-CGTCTTCCCTTCGAATC 29262
Query 112676 CGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA 112735
|||||| || | || || || |||||||| || || || || || |||||
Sbjct 29261 ACCCGAAGCTCGTGAGCTGAACAAGCAAATCTTTGAGACCATCTACCATGCTGCCCTTGA 29202
Query 112736 GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 112795
||| | |||| | || ||||||| ||||| ||| | || |||| || || ||
Sbjct 29201 GGCCTCTATGGAGATTGCCAAGGTTGAAGGTCCTTATTCGTCATTCAAGGGATCACCCGC 29142
Query 112796 TTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTG 112855
|| |||| | ||||||| ||| |||||||| | || ||| | | || ||
Sbjct 29141 CTCTGAAGGCATTCTTCAATATGACATGTGGGATGTCAAGCCCACCGACCTGTGGGAGTG 29082
Query 112856 GGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACC 112915
||| | |||||||| | || |||||| | |||||||| ||||| | | | || ||
Sbjct 29081 GGATTCGCTCAAGGAGCAAATTAAGGAGCACGGTCTTCGCAACAGCTTGCTCGTCGCCCC 29022
Query 112916 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 112975
||||| || ||| ||| | || ||||||||||| || || || ||||| ||||||||
Sbjct 29021 TATGCCCACTGCCAGCACTTCCCAGATCTTGGGTAACAACGAGTGTTTTGAGCCCTACAC 28962
Query 112976 GACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 113027
| |||||||| | | || | ||| || || ||||| | ||||||||
Sbjct 28961 CTCCAACATCTACCAGCGACGTGTCCTTGCTGGCGAGTTCCAGGTTGTCAAC 28910
>seq219
Length=54288
Score = 152 bits (168), Expect = 6e-32
Identities = 355/523 (68%), Gaps = 13/523 (2%)
Strand=Plus/Minus
Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 101873
||||| || || ||| | ||||| || ||||||||| |||| ||||| | | | ||
Sbjct 43279 TGGACCGCCGAGGAGATTGATCTGTCCAAGGATTTGCACGACTGGAACAACCGCCTGAAC 43220
Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933
|| | || ||| | ||||| |||||||||| |||||||||| || || || |||
Sbjct 43219 GATGACGAGAAGTACTTCATCTCTCACATCCTGGCCTTCTTTGCTGCCTCGGACGGCATT 43160
Query 101934 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 101992
|| ||||| | | || | ||||| || |||| | || || |||
Sbjct 43159 GTCAACGAGAACCTGGTCGAGCGTTTCAGCGGCGAGGTTCAGATCCCC-GAGGCTCGATG 43101
Query 101993 TTTCTATGCGTATCAATGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCA 102051
||||| | || || | |||| ||| | | | || ||||||||| | ||||
Sbjct 43100 CTTCTACG-GTTTCCAGATCATGATGGAGAACATCCACTCCGAGACATACTCTCTGCTCA 43042
Query 102052 TAGACAAGTATATTAAGGATGGTGCTGAGAA-GAAGC-AGCTCTTTGAAGCCATCCAAAC 102109
| |||| || | ||||| | | | | | | | | ||||| | || || | ||
Sbjct 43041 TCGACACCTACGTCAAGGA--GCACAGCCAGCGCACCTACCTCTTCAACGCTATTGAGAC 42984
Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 102168
| || || |||| ||||| || || ||||| || |||||| | | |||| | |
Sbjct 42983 TATCCCTTGCATTCGCAAGAAGGCCGAGTGGGCCATCAAGTGGATCCAGGACAAGAACTC 42924
Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228
||||||||| |||| ||| | || ||||| ||||||||||||||||||| ||
Sbjct 42923 -TTCCTTTGCCCAGCGTCTCGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGAG 42865
Query 102229 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 102288
|||| | | || | |||||||||||| ||||||||||||| ||||| ||||||||
Sbjct 42864 CCTTTGCCTCCATCTTCTGGCTCAAGAAGAGAGGTCTCATGCCTGGTCTGACCTTCTCCA 42805
Query 102289 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
||||||| ||||||||||||||||| || ||| || |||||
Sbjct 42804 ACGAGCTCATCTCTCGTGACGAGGGTCTGCACACTGACTTTGC 42762
>seq18
Length=239243
Score = 141 bits (156), Expect = 1e-28
Identities = 284/414 (69%), Gaps = 18/414 (4%)
Strand=Plus/Plus
Query 15887 ATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGC 15946
||||||||| || || || | || || | || ||||| ||| | ||||| || ||||
Sbjct 111133 ATCAAAGCGGCCAGGACGCATCAGGGCCTTGTCCAGGATGTCAGCACGATTGGTACCGGC 111192
Query 15947 GATGACAACAATACCTGTT-TCGT-TATCAAAACCATCCATCTCTGTCAAAAGCTGGTTA 16004
| |||||| | |||||| ||| | | || || ||||| ||||| | || |||||||
Sbjct 111193 CAAGACAACGA--CCTGTTCTCGAGTGTTGAATCCGTCCATTTCTGTGAGAATCTGGTTA 111250
Query 16005 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCC--CA 16062
| || ||| ||||| ||||| | | |||| | | || || || || ||
Sbjct 111251 AGGGTAGCTTCGCGTTCGTCATTTCCACCGAATCCACGACCGCT---TTCCTGTCGAGCA 111307
Query 16063 CGGC-------ATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACT 16115
|||| ||| || || |||||||||| |||||| || ||| | ||| | |
Sbjct 111308 CGGCCGATAGCATCGATTTCGTCAATGAAGATGATGCAAGGCGCATTCTTTCGACCTTCG 111367
Query 16116 TCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCG 16175
|||| || || ||||| || | ||||| ||||| ||||||||||| || | |
Sbjct 111368 GCAAACAGGTCTCGTACTCGAGACGGACCCACGCCAACGAACATCTCCACGAACTCAGAA 111427
Query 16176 GCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGT 16234
|| || || | ||| ||||| ||| || || ||| |||| ||||||||||||
Sbjct 111428 CCGCTCACGCTGAA-GAATGGGACGCCAGACTCTCCAGCAGTGGCCTTGGCGAGAAGAGT 111486
Query 16235 CTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288
||| ||||| ||||| || | ||||| ||||||||| ||||||||||||||
Sbjct 111487 CTTTCCCGTTCCTGGGGGGCCGGAGAGGATGGCACCTCGAGGAATCTTGGCGCC 111540
>seq85
Length=118840
Score = 82.4 bits (90), Expect = 9e-11
Identities = 196/295 (66%), Gaps = 6/295 (2%)
Strand=Plus/Plus
Query 176036 AGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATTGTTTGAACCCATGTAG 176095
|| || | |||||| | ||||| ||||| || | |||||||||||||| |||| |
Sbjct 54187 AGTCGAGAACCAAAGTTACCACTGGGCTCGAGGACGTTGATATTGTTTGAGCCCACAAAA 54246
Query 176096 TCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACTTCACCGTGGTGGTACGCACTC 176155
|| | ||||| | ||||| | | || || ||||||||||||||||| ||| ||
Sbjct 54247 TCTTGAGCCAATCCAATGATCGTCTGCTGCAGTGAAACTTCACCGTGGTGGTAGGCAGTC 54306
Query 176156 TTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTCATCCTTG---AGATTCTTG 176212
| | ||| | | |||| || |||| | ||||||| ||| | ||| |
Sbjct 54307 AGACCAGAGACGTAACCAGCCA---GCTCCACAACCTTCTCATCTTTGACCACGTTCCTC 54363
Query 176213 TGGAAACATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCATCCGCCATGTGTGCG 176272
| |||||| ||||| | ||||| ||||| |||||| | ||||| ||| | |
Sbjct 54364 TTGAAACAGGCGTATAGCACCTTTCGTTGACCAGGCTTCAATCCATCAATCATCGACGGG 54423
Query 176273 ATAGAACGCTTCAAGTCCGCCAAACTGAAGTTGACGAGGTCCTTGTGTACAAAGT 176327
|| || | | ||||||| |||||| | ||| ||||||| |||||||
Sbjct 54424 ATGGATCTTATGTTATCCGCCATACTGAACAGAATGAGCTCCTTGTTCACAAAGT 54478
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620731234396080
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