Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq135 210 3e-49
seq219 98.7 1e-15
>seq135
Length=88816
Score = 210 bits (232), Expect = 3e-49
Identities = 1076/1696 (63%), Gaps = 61/1696 (4%)
Strand=Plus/Plus
Query 109408 CGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAG 109467
|| || || ||||| || || ||||||||| |||||| | | |||||| |
Sbjct 28605 CGCAGGTAGTACATGCCAGTCTTGAGACCAAGCTTCCAGCCAGTGAAATGCATGCTGGTA 28664
Query 109468 AGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAAT 109527
| ||| | ||| ||| || ||| | ||||| ||||| |||||||| |||||
Sbjct 28665 ATCTTGCCCATTGTGGGATCCTTCATGTGGATGTTCAAGGACTGGGACTGATCAATGAAA 28724
Query 109528 CGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTG 109587
|||||| || || | ||| | || || ||| ||| ||||| |||||||||
Sbjct 28725 GCACCACGGTCGGCTGACATCTGGACAATTTGACGTTGAGAAATCTCCCAAACAGTCTTG 28784
Query 109588 TACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCAC---CAGCC 109644
|||| |||||| || ||||||||| ||||| || |||||||| ||||
Sbjct 28785 TACAGGGCCTTGATGTCGGCGGGAATGTTGGGAATGTTCTGGATAGAGCCGTTCTCAGCA 28844
Query 109645 TTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGTCAACA 109704
| | || | | |||||| | | ||||| || ||| | ||||| | | |
Sbjct 28845 ATGA---TGCGGTTCTTCATAGCATCGGACCAAAGGCCGGTATCGACAAGATCCTTGAGA 28901
Query 109705 AGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTC 109764
|| |||||| || || || |||||||| ||||| |||||||||| |
Sbjct 28902 AGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACACGTCGCTGGTAGATGTTGGAG 28961
Query 109765 GTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATG 109824
|||||||| || |||||||| ||||| || | ||| || | |||| || ||||||||
Sbjct 28962 GTGTAGGGCTCAAAACACTCGTTGTTACCCAAGATCTGGGAAGTGCTGGCAGTGGGCATA 29021
Query 109825 GGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCC 109884
|| || | ||| | ||||| || ||||| | | ||| | |||| | | |||
Sbjct 29022 GGGGCGACGAGCAAGCTGTTGCGAAGACCGTGCTCCTTAATTTGCTCCTTGAGCGAATCC 29081
Query 109885 CAATCATAACGACCACTAAATT--TAGTCTCACCATCCCACATATCTGGTTGAAGTACAC 109942
|| || |||| | | | | || |||||||||| || |||||| | |
Sbjct 29082 CACTC-------CCAC-AGGTCGGTGGGCTTGACATCCCACATGTCATATTGAAGAATGC 29133
Query 109943 CCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGG 110002
| |||| || || || |||||||| | || | || ||||||| ||| | |||
Sbjct 29134 CTTCAGAGGCGGGTGATCCCTTGAATGACGAATAAGGACCTTCAACCTTGGCAATCTCCA 29193
Query 110003 ATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAG 110062
|| ||||| || || ||||| || || |||||||| || || |||| ||||
Sbjct 29194 TAGAGGCCTCAAGGGCAGCATGGTAGATGGTCTCAAAGATTTGCTTGTTCAGCTCACGAG 29253
Query 110063 ACTCTTCACAGTCGAAGGGAAGACCACAAAG-AATAAACACATCCGCTAGACCCTGAACA 110121
|| | ||||||||||||| || || || || |||| || || ||||| |||
Sbjct 29254 CTTCGGGTGATTCGAAGGGAAGACG-CAGAGCAAGGAAAGCATCAGCAAGTCCCTGGACA 29312
Query 110122 CCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAG 110181
|| | ||||||||| || || |||| | ||||| | || ||||| ||
Sbjct 29313 CCAACACCAATGGGTCGGTGACGGCTGTTGCTGTTGCGAGCCTCCTGAACAGGGTAGTAG 29372
Query 110182 TTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTT- 110240
|| ||||||| || ||||| || || ||| || | ||| || || ||
Sbjct 29373 TTCACATCGATGATGCGGTTGAGGTTACGGACAACCACCTTTGTAACTTCGTGAAGCTTT 29432
Query 110241 -----GTCGTA--ATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAATAG 110293
||| || ||| |||| | ||| |||| | |||||||| | ||
Sbjct 29433 TTAAAGTCATAGCATCCTTCGTTGTAGTC--------GACAAAAGCAGGGAGAGCCAAAG 29484
Query 110294 ACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACA 110353
| || | ||||| |||| ||| || | | ||| || | ||| || || || |
Sbjct 29485 AGGCCAAGTTGCAGACAGCGACCTCATCAGGCGCAGAGTACTCAATAATCTCAGTGCAGA 29544
Query 110354 AGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCT 110413
|||||| || ||| |||| ||||||||| || ||| |||||| |||||
Sbjct 29545 GGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGCTATCCT 29604
Query 110414 TATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CA 110472
| ||||||||| | ||| ||||||| || ||||| | || || || | | ||| | |
Sbjct 29605 TGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCCAGGATAGAGTACCACAGCT 29664
Query 110473 TCGGCGGCGGGGACAGT--TGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGT 110530
|| | | | ||| ||| |||| | | | || |||| ||| ||||| ||||
Sbjct 29665 TCTGAG-CTCGGATAGTCTTGCG--ACCACGTCCCTCCTTCTCATACTTCTCATACAGAG 29721
Query 110531 CCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTG-TCGGGACAGAAGAGG 110589
|||| ||||||| || || |||| ||| || || || | || || | |
Sbjct 29722 CCTCGAATTCCTCGCCATAGCAGTCAGCAAGGCCAGG-GCATTCATTAGGGCACATCAAA 29780
Query 110590 GACCAATTTCCACCCTC--CTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCG 110647
| ||||| ||| || ||| || | |||||||||||| ||||| ||||| | ||
Sbjct 29781 GTCCAAT--CCAAGTTCTTCTCGACGCGCTTCATGAACAGATCAGGGATCCAGAGAGCGA 29838
Query 110648 AGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGT 110707
||| ||||||||| ||| ||||||| | || ||||| ||| || || | || |
Sbjct 29839 GGAACAGGTCACGGGCACGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAACT 29898
Query 110708 CCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGACG----- 110762
| | || ||| | |||||| || ||||| |||| || | || || | ||||
Sbjct 29899 CAAAGACATCGGCGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACC---AGGACGCTTGT 29955
Query 110763 -ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTC 110821
|| |||||| || || | || ||| |||||||| | ||||| || || || |
Sbjct 29956 TTCCACCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATGGGGATGATAC 30015
Query 110822 CATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATAT 110881
| | ||| ||| ||||| || || || ||||||| || ||||| |
Sbjct 30016 CGTTGGAGGTACCGTTTGTGCCGGCGATATAAGAGCCTGTGGCACGGATACGGTGGACGT 30075
Query 110882 GCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTACCATAA 110940
| || |||||||| ||| ||| ||| ||||| ||| | | ||| | ||
Sbjct 30076 TGAGGCCGATACCACCAGCCATCTTGGAAATCATGGCACATGTCT-TCAAAGTATCGTAG 30134
Query 110941 ATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGA 111000
||||| ||||| || |||| || ||| | ||||| || || | ||||| |
Sbjct 30135 ATACCCTCAATGCTGTCGTCCTTCATGTCAACCAAGAAGCATGAGGAGAGCTGAGCTTGC 30194
Query 111001 GGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG--GGACATCT 111058
|| || || || |||||||| || || | |||||| | | ||| ||| ||||||
Sbjct 30195 GGGGTACCAGCGTTGAAGAGGGTGGGGGACGCATG--GGTAAAGAATTTGCTGGACATGA 30252
Query 111059 TGTTGTATGTGTCGAG 111074
|| |||||| || ||
Sbjct 30253 GGTGGTATGTCTCAAG 30268
>seq219
Length=54288
Score = 98.7 bits (108), Expect = 1e-15
Identities = 139/192 (72%), Gaps = 5/192 (3%)
Strand=Plus/Plus
Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567
|| || || || || |||||||||||||| || |||| || ||||||||||| |||
Sbjct 42774 TGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAGACCT 42833
Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627
|| ||||| ||||| ||||||| ||| ||| |||||||| ||||| |||
Sbjct 42834 CTCTTCTTGAGCCAGAAGATGGAGGCAAAGGCTCCGCTGAAGAAGATACCCTCAACAGCA 42893
Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GAACCACTTGAGAGC 119683
|| || || | ||||||| || ||||| ||| |||||| || |||||||| ||
Sbjct 42894 GCAAAGGCAACGAGACGCTGGGC-AAAGGAAGAGTTCTTGTCCTGGATCCACTTGATGGC 42952
Query 119684 CCAGTTGGCCTT 119695
||| | ||||||
Sbjct 42953 CCACTCGGCCTT 42964
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588965405794200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |