Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq135 242 4e-59
seq18 109 6e-19
seq219 98.7 1e-15
>seq135
Length=88816
Score = 242 bits (268), Expect = 4e-59
Identities = 969/1501 (65%), Gaps = 57/1501 (4%)
Strand=Plus/Plus
Query 105833 ATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGC 105892
||| | | ||||||| | | ||||||||| || | | ||||| |||| ||
Sbjct 28848 ATGCGGTTCTTCATAGCATCGGACCAAAGGCCGGTATCGACAAGATCCTTGAGAAGCCAG 28907
Query 105893 TTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAG 105952
|||||||| | ||||| || || ||| | || | | |||||||| | ||||||
Sbjct 28908 GGGTTGACAACCTGGAACTCGCCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAG 28967
Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012
|| ||||| || || || ||||||||||| || | ||| ||| || ||||| || ||
Sbjct 28968 GGCTCAAAACACTCGTTGTTACCCAAGATCTGGGAAGTGCTGGCAGTGGGCATAGGGGCG 29027
Query 106013 ATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTC- 106071
| | | ||||| |||||||| | ||||| || | |||||||| |||||| ||
Sbjct 29028 ACGAGCAAGCTGTTGCGAAGACCGTGCTCCTTAATTTGCTCCTTGAGCGAATCCCACTCC 29087
Query 106072 -----GTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGAC 106126
|| | || ||||| | |||||||| ||| ||||||| | |||| ||
Sbjct 29088 CACAGGTCGGTGGGCTTG------ACATCCCACATGTCATATTGAAGAATGCCTTCAGAG 29141
Query 106127 GTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCA-ATTCACAGCTCGC 106185
| ||| || |||| |||| | ||| | ||||| | | || | | || || ||
Sbjct 29142 GCGGGTGATCCCTTGAATGACGAATAAGGACCTTCAACCTTGGCAATCTCCATAG-AGGC 29200
Query 106186 CTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATC 106245
||| |||| || || || ||||| |||||||| | |||| ||| |||||
Sbjct 29201 CTCAAGGGCAGCATGGTAGATGGTCTCAAAGATTTGCTTGTTCAGCTCACGAGCTTCGGG 29260
Query 106246 TGAATCAAATGCGTAGCGGCACA-AAATAAATACATCCGCGAGACCTTGAACACCCAAAC 106304
||| || || | | || ||| | || || |||| || || || || ||||| | ||
Sbjct 29261 TGATTCGAA-GGGAAGACGCAGAGCAAGGAAAGCATCAGCAAGTCCCTGGACACCAACAC 29319
Query 106305 CAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGT 106364
|||| |||| ||| || | || || || || || ||| || || | || |
Sbjct 29320 CAATGGGTCGGTGACGGCTGTTGCTGTTGCGAGCCTCCTGAACAGGGTAGTAGTTCACAT 29379
Query 106365 CAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT 106424
| |||| ||||| || || | ||| | |||||| | ||| ||||| |||| | | |
Sbjct 29380 CGATGATGCGGTTGAGGTTACGGACAACCACCTTTGTAACTTCGTGAAGCTTTTTAAAGT 29439
Query 106425 CAAAAGTGCGAGTCTCTTCATT------GACATACTTTGGAAGGGCGATTGATGCCAAAT 106478
|| | | || |||| || |||| | || || || | || ||||| |
Sbjct 29440 CATA-----GCATC-CTTCGTTGTAGTCGACAAAAGCAGGGAGAGCCAAAGAGGCCAAGT 29493
Query 106479 TGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAAC 106538
|||| ||||| |||||| | | |||||| | ||| || || || | |||||| |
Sbjct 29494 TGCAGACAGCGACCTCATCAGGCGCAGAGTACTCAATAATCTCAGTGCAGAGGTTGGAGC 29553
Query 106539 TCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCA 106598
| || || |||| ||||| ||||| ||||| |||||| ||||||||||||||
Sbjct 29554 TGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGCTATCCTTGTAGAGCA 29613
Query 106599 TGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCT 106657
|| |||| | || ||||| ||||| | || || || | | ||||| | || | |||
Sbjct 29614 TGAAGGGGTTACCAGTCTCAGTCTGGGCCTCCAGGATAGAGTACCACAGCTTCTG-AGCT 29672
Query 106658 GGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCC 106717
| | | | | | ||||||||| ||| ||||| || || || || || |||
Sbjct 29673 CGGATAGTCTTGCGACCACGTCCCTCCTTCTCATACTTCTCATACAGAGCCTCGAATTCC 29732
Query 106718 TCACCCACCGC-GTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGAC 106775
|| ||| || ||| | || || || || || | || || | | || ||| | |
Sbjct 29733 TC-GCCATAGCAGTCAGCAAGGCCAGG-GCATTCATTAGGGCACATCAAAGTCCAAT--C 29788
Query 106776 CA--CCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 106833
|| || ||| || ||||||||||| || || || ||||| || | || || ||
Sbjct 29789 CAAGTTCTTCTCGACGCGCTTCATGAACAGATCAGGGATCCAGAGAGCGAGGAACAGGTC 29848
Query 106834 TC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATAT 106892
| ||| || ||||||| | || ||||| || | ||||||||||| | || ||
Sbjct 29849 ACGGGCACGGA-CCTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAACTCAAAGACAT 29907
Query 106893 CCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTT 106946
| |||||||| ||||| || |||| || | | || ||||| ||| | |
Sbjct 29908 CGGCGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACC---AGGACGCTTGTTTCCACCCT 29964
Query 106947 GATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATT 107006
| | || || | || ||| ||| || || |||||||| || || ||||| | ||
Sbjct 29965 GGTCGACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATGGGGATGATACCGTTGGAGG 30024
Query 107007 GACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCC 107064
||| ||||| || ||| ||| ||| | |||| | | | |||| || | ||
Sbjct 30025 TACCGTTTGTGCCGGCGATATAAGAGCCT--GTGGCACGGATACGGTGGACGTTGAGGCC 30082
Query 107065 AATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTT 107124
||||| |||||| ||| || || ||||| | | | ||| | |||||||| |
Sbjct 30083 GATACCACCAGCCATCTTGGAAATCATGGCACATGTCTTCAAAGTATCGTAGATACCCTC 30142
Query 107125 GATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACC 107184
|| ||| ||||| || | | | |||||| ||| | ||| | | || |||||
Sbjct 30143 AATGCTGTCGTCCTTCATGTCAACCAAGAAGCATGAGGAGAGCTGAGCTTGCGGGGTACC 30202
Query 107185 AGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACA--TACCTTGGGACATCTTGTCGTAT 107242
||| ||||||||||| || | || || | || | | || |||||| || ||||
Sbjct 30203 AGCGTTGAAGAGGGTGGGGGACGCATGGGTAAAGAATTTGCT--GGACATGAGGTGGTAT 30260
Query 107243 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATG 107302
||||| | |||| ||||||| || || ||||| | ||||| ||||||| ||||
Sbjct 30261 GTCTCAAGGACACGCTCAATGTTGTCTCCCCAAATGCCAACAGCCACTCGCATAATCATG 30320
Query 107303 T 107303
|
Sbjct 30321 T 30321
>seq18
Length=239243
Score = 109 bits (120), Expect = 6e-19
Identities = 277/414 (67%), Gaps = 18/414 (4%)
Strand=Plus/Plus
Query 9194 ATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGC 9253
||||||||| || ||||| | || || | || ||||| ||| | ||||| || ||||
Sbjct 111133 ATCAAAGCGGCCAGGACGCATCAGGGCCTTGTCCAGGATGTCAGCACGATTGGTACCGGC 111192
Query 9254 GATGACAACAATACCTGTT-TC-ATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTA 9311
| |||||| | |||||| || | | | || || ||||| ||||| | || ||||||
Sbjct 111193 CAAGACAACGA--CCTGTTCTCGAGTGTTGAATCCGTCCATTTCTGTGAGAATCTGGTTA 111250
Query 9312 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCC--CA 9369
| || ||| ||||| ||||| | | |||| | | || || || || ||
Sbjct 111251 AGGGTAGCTTCGCGTTCGTCATTTCCACCGAATCCACGACCGCT---TTCCTGTCGAGCA 111307
Query 9370 CGGC-------ATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATT 9422
|||| ||| || || |||||||||| || || || ||| | || |
Sbjct 111308 CGGCCGATAGCATCGATTTCGTCAATGAAGATGATGCAAGGCGCATTCTTTCGACCTTCG 111367
Query 9423 TCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCG 9482
|||| || || || || | | ||||| ||||| ||||||||||| || | |
Sbjct 111368 GCAAACAGGTCTCGTACTCGAGACGGACCCACGCCAACGAACATCTCCACGAACTCAGAA 111427
Query 9483 GCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGT 9541
|| || || | ||| ||||| ||| || || ||| |||| ||||||||||||
Sbjct 111428 CCGCTCACGCTGAA-GAATGGGACGCCAGACTCTCCAGCAGTGGCCTTGGCGAGAAGAGT 111486
Query 9542 CTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595
||| ||||| ||||| || | ||||| |||||| || ||||||||||||||
Sbjct 111487 CTTTCCCGTTCCTGGGGGGCCGGAGAGGATGGCACCTCGAGGAATCTTGGCGCC 111540
>seq219
Length=54288
Score = 98.7 bits (108), Expect = 1e-15
Identities = 342/524 (65%), Gaps = 15/524 (3%)
Strand=Plus/Plus
Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333
||||| || ||| |||||||| || || || || || || || |||||| || ||
Sbjct 42762 GCAAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCA 42821
Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393
||||||||||| | |||||| | ||| | || | | || | ||| ||||||||||
Sbjct 42822 GGCATGAGACCTCTCTTCTTGAGCCAGAAGATGGAGGCAAAGGCTCCGCTGAAGAAGATA 42881
Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTC---A 117450
||||| ||| ||||| |||| || |||| ||| ||||| ||| || ||||
Sbjct 42882 CCCTCAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGA---AGAGTTCTTGTCCTGG 42938
Query 117451 AACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCA 117510
| ||| || || ||||| | |||||||| ||| || || | ||| | || || |
Sbjct 42939 ATCCACTTGATGGCCCACTCGGCCTTCTTGCGAATGCAAGGGATAGTCTCAATAGCGTTG 42998
Query 117511 AATAACT-GCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGT 117569
|| | | | | | | | | ||||| | ||| |||| || | || |||||
Sbjct 42999 AAGAGGTAGGTGCGCTGGCTGTGC-TCCTTGACGTAGGTGTCGATGAGCAGAGAGTATGT 43057
Query 117570 TTCGCCATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTA 117628
||| || | | | ||| ||| | || | ||||||| | || || ||| |
Sbjct 43058 CTCGGAGTGGATGTTCTCCATCATGATCTGGA-AACCGTAGAAGCATCGAGCCTCGGGGA 43116
Query 117629 TCTGCACTTCATCCGC-AAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCA 117687
|||| || || |||| ||| | | ||||| ||||| || || || ||
Sbjct 43117 TCTGAACCTC-GCCGCTGAAACGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGAGGCA 43175
Query 117688 GCAAAGAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTC 117744
|||||||| |||||||||| ||||| | ||| || | || |||| || | |||
Sbjct 43176 GCAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTC 43235
Query 117745 CAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788
||||||| | ||| ||||||| ||||| || || || |||||
Sbjct 43236 CAGTCGTGCAAATCCTTGGACAGATCAATCTCCTCGGCGGTCCA 43279
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589970187720360
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