Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq38 98.7 6e-16
>seq38
Length=159530
Score = 98.7 bits (108), Expect = 6e-16
Identities = 152/215 (71%), Gaps = 8/215 (4%)
Strand=Plus/Minus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||||||||||| ||||| || ||||| ||||| ||||| ||| | || | || ||
Sbjct 139217 AACCAAGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGACCGTCTTC 139158
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
|||||| || || ||||| || || || |||||||| | || | |||||||||||
Sbjct 139157 CAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTG 139098
Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947
||||| |||||| || | ||||| ||| | ||| || || | || || |
Sbjct 139097 GATCTTTGATTTGAC--AT--TGTCGATGGTATCAGATGACTCCACCTCCAGTGTGATTG 139042
Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
| || || || | |||||| || ||||||||||||
Sbjct 139041 TCTTGCCGGTTAAAGTCTTGACGAAGATCTGCATA 139007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324627906636792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |