Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq56 116 3e-21
>seq56
Length=137465
Score = 116 bits (128), Expect = 3e-21
Identities = 257/380 (68%), Gaps = 4/380 (1%)
Strand=Plus/Plus
Query 30008 TGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGA 30067
||||||| || || || |||||| |||||||| |||||||| |||| | ||| |
Sbjct 86625 TGTGGCAGGGCGGCAGGGCCATGCTCTTGAAGTCTTTTGGGTTCCATGCGCTGAGGATCA 86684
Query 30068 TGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCC 30127
| | | || | |||||||| | || || | | | |||||| || || |
Sbjct 86685 TTCTGCGATCATAGGGGTTGTTGCGGAGCTTGTGGATGATCTCGGCCAGCTGGTCGACGC 86744
Query 30128 CCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGA 30187
|| | || | ||| |||||| | ||| || || || || || |||| ||||||||
Sbjct 86745 CCTTGCCGGCGTAATCTGCCTTTGCGTCGACATAGTCGGCGCCAAAGTGCCGCCACTGGA 86804
Query 30188 ACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCT-TGTCCAAA 30246
| ||||| || || || ||||| || | || | |||| || |||| | |||| |
Sbjct 86805 AGCCGTAGACGGGGCCTAGGTCGCCGACGTCGCGGTGCGTGA-GCCCGACGCTGTCAAGG 86863
Query 30247 AAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAG 30306
|| || | ||| |||||| ||||||||||||| || || ||| ||| | |||||
Sbjct 86864 AACTCGCGGGACCCGTTGCCGTCCCAGATCTTGACGCCGACGTCGCTGAGGGCGGTGGAG 86923
Query 30307 TTTGTG-GACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCT 30365
||| ||||| || |||||| |||||||| | | |||||| ||||| |
Sbjct 86924 GAGGTGTTGCCCTC-GATGAACCAGAGCAGCTCGGCGATGACGGCGCGGAGGAAGACTCG 86982
Query 30366 CTTGGTCGTGAGGAGGGGAA 30385
|||||| |||||||||||||
Sbjct 86983 CTTGGTGGTGAGGAGGGGAA 87002
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408610433741147
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |