Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq135 302 8e-77
seq219 190 4e-43
>seq135
Length=88816
Score = 302 bits (334), Expect = 8e-77
Identities = 916/1394 (66%), Gaps = 51/1394 (4%)
Strand=Plus/Plus
Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966
|||||||| | |||||| || || | || || | | |||||| | ||| || ||||||
Sbjct 28908 GGGTTGACAACCTGGAACTCGCCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAG 28967
Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026
||||| | | ||||||||| |||| ||||| | ||||||||| |||||||| || ||
Sbjct 28968 GGCTCAAAACACTCGTTGTTACCCAAGATCTGGGAAGTGCTGGCAGTGGGCATAGGGGCG 29027
Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCC 213086
|| || | ||||| | | |||||||| || | | ||| |||| |||
Sbjct 29028 ACGAGCAAGCTGTTGCGAAGACCGTGCTCCTTAATTTGCTCCTTGAGCGAATCCCACTCC 29087
Query 213087 CATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146
|| |||||| | ||| || | |||||||||| | || | |||||||
Sbjct 29088 CA---------CAGGTCGGTGGGCTTGACATCCCACATGTCATATTGAAGAATGCCTT-- 29136
Query 213147 CTCACGGGGCTG--CCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204
| | | || || |||| | | || || || || || | ||||||| | ||| |
Sbjct 29137 CAGAGGCGGGTGATCCCTTGAATGACGAATAAGGACCTTCAACCTTGGCAATCTCCATAG 29196
Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264
| |||| |||||||| | ||||||||| ||||| || | | |||| |||| || |
Sbjct 29197 AGGCCTCAAGGGCAGCATGGTAGATGGTCTCAAAGATTTGCTTGTTCAGCTCACGAGCTT 29256
Query 213265 CTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324
| || || |||||| | || |||| ||||||| || |||||||| || |
Sbjct 29257 CGGGTGATTCGAAGGGAAGACGCAGAGCAAGGAAAGCATCAGCAAGTCCCTGGACACCAA 29316
Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTG 213383
|| ||||||| ||| | ||| ||| |||| ||||| | ||||| ||||
Sbjct 29317 CACCAATGGGTCGGTGACGGCTGTTGCTGTTGCGAGC-CTCCTGAACAGGGTAGTAGTTC 29375
Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443
|||||||| ||||||||| ||| |||| || || || | | || | |
Sbjct 29376 ACATCGATGATGCGGTTGAGGTTACGGACAACCACCTTTGTAACTTCGTGAAGCTTTT-- 29433
Query 213444 TGATTGAACACGTAGCCCCCGTCCTGC------ACAAACTCAGGCAGGGCGATGCTGGCC 213497
| || | |||| || || | ||||| |||| || || | ||||
Sbjct 29434 ----TAAAGTCATAGCATCCTTCGTTGTAGTCGACAAAAGCAGGGAGAGCCAAAGAGGCC 29489
Query 213498 AGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTG 213557
| |||||| || || ||||| | || | | |||||| || ||||| ||||| ||||||
Sbjct 29490 AAGTTGCAGACAGCGACCTCATCAGGCGCAGAGTACTCAATAATCTCAGTGCAGAGGTTG 29549
Query 213558 CTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA-ATCCTTGTA 213616
|| |||||||| |||||||||| ||||| ||| ||| | |||| |||||||||
Sbjct 29550 GAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTT-GCGGTTGCAGCTATCCTTGTA 29608
Query 213617 GAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCT 213676
||||||| ||||| || ||||| ||||| | |||| || | ||| || | | |
Sbjct 29609 GAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCCAGGATAGAGTACCACAGCTTC-T 29667
Query 213677 GGCCTTGACCACCCGCCTGACAGC-TCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGT 213735
| || | | | ||| | ||| | | ||| |||| || || || | |
Sbjct 29668 GAGCTCGGATAGTCTTGCGACCACGTCCCTCCTT---CTCATACTTCTCATACAGAGCCT 29724
Query 213736 TGAATTCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGG-ATGCGGGACACATGAGGCT 213793
|||||| | ||| || | | | | || || || || || ||| ||||| | |
Sbjct 29725 CGAATTCCTCGCCATAGCAGTCAG-CAAGGCCAGGGCATTCATTAGGG-CACATCAAAGT 29782
Query 213794 CCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGA 213852
||| ||| || | |||| ||| | || ||||||||| || |||| ||| || ||| ||
Sbjct 29783 CCAATCCAAGTTCTTCTC-GACGCGCTTCATGAACAGATCAGGGATCCAGAGAGCGAGGA 29841
Query 213853 ACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAA 213912
||||||| | || | ||| ||| || ||| ||||| || || || || ||||
Sbjct 29842 ACAGGTCACGGGCACGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAACTCAA 29901
Query 213913 AGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGC 213969
||| || |||||||| ||||| | ||||||||||||||| || || | |||| || |
Sbjct 29902 AGACATCGGCGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTTCCAC 29961
Query 213970 CCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGG 214029
||||||| || ||||| ||||||||| || || | ||| | | |||||||
Sbjct 29962 CCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATGGGGATGATACCGTTGG 30021
Query 214030 ACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC---TCAGGTTGCTCATGGAGA 214086
| ||||| || || || ||||| ||||| | ||| | | ||| | | | ||
Sbjct 30022 AGGTACCGTTTGTGCCGGCGATATAAGAGCCTGTGGCACGGATACGGTGG---ACGTTGA 30078
Query 214087 GCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGC 214146
| || || ||||| || |||||| |||||||| || | ||| ||| || ||| |
Sbjct 30079 GGCCGATACCACCAGCCATCTTGGAAATCATGGCACATGTCTTCAAAGTATCGTAGATAC 30138
Query 214147 CGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG-GAC 214205
| | |||||||| || | | || | ||||||||| ||||||| | || || |
Sbjct 30139 CCTCAATGCTGTCGTCCTTCATGTCAACCAAGAAGCATGAGGAGAGCT-GAGCTTGCGGG 30197
Query 214206 GAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTG 214265
| |||| |||||| || |||||| |||||| | | || ||| | || | ||| |
Sbjct 30198 GTACCAGCGTTGAAGAGGGTGGGGGACGCATGGGTAAAGAATTTGCTGGACATGAGGTGG 30257
Query 214266 TAGGTCTCCAGGAC 214279
|| ||||| |||||
Sbjct 30258 TATGTCTCAAGGAC 30271
>seq219
Length=54288
Score = 190 bits (210), Expect = 4e-43
Identities = 492/738 (67%), Gaps = 29/738 (4%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
|||||| || || || | ||||| |||||||| ||||| || ||| || ||||||||
Sbjct 42470 CTGGTACTCGCCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGAGAAATGTTCTC 42529
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC----CGTGTC--AGGCCCATCTGTTC 47952
||| ||| |||||||||| | || || | | ||| || || | | |
Sbjct 42530 CATAAAGTCAAAGGGGTTGGAGGACTTGTAGATCTTCTCGTTTCCGAGAGCGA------C 42583
Query 47953 CAGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTAT 48012
||||| |||| || || |||| ||||| | ||| ||| || ||||||||| |
Sbjct 42584 AAGCAGACGATCGGCAACAAACTCAATGTACTGCTTCATCAGGTTGGCGTTCATGCCCAG 42643
Query 48013 GAGGGA-CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTAT-CTGCACGGCTTCCCCC 48070
|| | || ||| | ||||| || | ||||||| ||| || ||| ||||| ||
Sbjct 42644 AAGAGCGCAAGGG-AGAGCCTCAGTCAAGAACTCCTGCTCGATTCTG-ACGGCATCAGTG 42701
Query 48071 ACAATCT----GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAG 48126
| || | | | | | | || | | | || || |||||| | | |||
Sbjct 42702 ATGATGTCACGGATAATCTCCTTGCTG-GCGCGGTTCTT---CAGGTGAGAG---TGGAG 42754
Query 48127 CATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCA 48186
|| ||| |||||||| |||||| || ||||| || ||||||| |||||||||||
Sbjct 42755 CAGGCAAGCAAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGT 42814
Query 48187 GAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAA 48246
||||||||||||| || |||| ||||||||||| || | || || | || |||
Sbjct 42815 CAGACCAGGCATGAGACCTCTCTTCTTGAGCCAGAAGATGGAGGCAAAGGCTCCGCTGAA 42874
Query 48247 GAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTC 48306
|||||| ||||| || || || || || ||| | || | || |||| |||||||||
Sbjct 42875 GAAGATACCCTCAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAAGAGTTCTTGTC 42934
Query 48307 TGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366
|||||| | ||||| || |||||||| ||||| || || ||||| || ||
Sbjct 42935 CTGGATCCACTTGATGGCCCACTCGGCCTTCTTGCGAATGCAAGGGATAGTCTCAATAGC 42994
Query 48367 CCGGAAGAGCTTCTTGCACTCAC-CTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGT 48425
|||||| | ||| || | ||| ||| || ||||| || ||| | ||
Sbjct 42995 GTTGAAGAGGTAGGTGCGCTGGCTGTGC-TCCTTGACGTAGGTGTCGATGAGCAGAGAGT 43053
Query 48426 ACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAA 48485
| |||| ||||| | ||||| || ||||||||| ||||||||| | |||||
Sbjct 43054 ATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCGG 43113
Query 48486 ACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAG 48545
| ||| || || | ||| | ||| | ||| ||||| ||||| || || || || |
Sbjct 43114 GGATCTGAACCTCGCCGCTGAAACGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGAGG 43173
Query 48546 CAGCAAAGAAGGCAAGGA 48563
||||||||||||| ||||
Sbjct 43174 CAGCAAAGAAGGCCAGGA 43191
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931516044053760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |