Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06- 08] 1,439 sequences; 37,686,724 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq135 302 8e-77 seq219 190 4e-43 >seq135 Length=88816 Score = 302 bits (334), Expect = 8e-77 Identities = 916/1394 (66%), Gaps = 51/1394 (4%) Strand=Plus/Plus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| | |||||| || || | || || | | |||||| | ||| || |||||| Sbjct 28908 GGGTTGACAACCTGGAACTCGCCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAG 28967 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 ||||| | | ||||||||| |||| ||||| | ||||||||| |||||||| || || Sbjct 28968 GGCTCAAAACACTCGTTGTTACCCAAGATCTGGGAAGTGCTGGCAGTGGGCATAGGGGCG 29027 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCC 213086 || || | ||||| | | |||||||| || | | ||| |||| ||| Sbjct 29028 ACGAGCAAGCTGTTGCGAAGACCGTGCTCCTTAATTTGCTCCTTGAGCGAATCCCACTCC 29087 Query 213087 CATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146 || |||||| | ||| || | |||||||||| | || | ||||||| Sbjct 29088 CA---------CAGGTCGGTGGGCTTGACATCCCACATGTCATATTGAAGAATGCCTT-- 29136 Query 213147 CTCACGGGGCTG--CCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204 | | | || || |||| | | || || || || || | ||||||| | ||| | Sbjct 29137 CAGAGGCGGGTGATCCCTTGAATGACGAATAAGGACCTTCAACCTTGGCAATCTCCATAG 29196 Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264 | |||| |||||||| | ||||||||| ||||| || | | |||| |||| || | Sbjct 29197 AGGCCTCAAGGGCAGCATGGTAGATGGTCTCAAAGATTTGCTTGTTCAGCTCACGAGCTT 29256 Query 213265 CTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324 | || || |||||| | || |||| ||||||| || |||||||| || | Sbjct 29257 CGGGTGATTCGAAGGGAAGACGCAGAGCAAGGAAAGCATCAGCAAGTCCCTGGACACCAA 29316 Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTG 213383 || ||||||| ||| | ||| ||| |||| ||||| | ||||| |||| Sbjct 29317 CACCAATGGGTCGGTGACGGCTGTTGCTGTTGCGAGC-CTCCTGAACAGGGTAGTAGTTC 29375 Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443 |||||||| ||||||||| ||| |||| || || || | | || | | Sbjct 29376 ACATCGATGATGCGGTTGAGGTTACGGACAACCACCTTTGTAACTTCGTGAAGCTTTT-- 29433 Query 213444 TGATTGAACACGTAGCCCCCGTCCTGC------ACAAACTCAGGCAGGGCGATGCTGGCC 213497 | || | |||| || || | ||||| |||| || || | |||| Sbjct 29434 ----TAAAGTCATAGCATCCTTCGTTGTAGTCGACAAAAGCAGGGAGAGCCAAAGAGGCC 29489 Query 213498 AGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTG 213557 | |||||| || || ||||| | || | | |||||| || ||||| ||||| |||||| Sbjct 29490 AAGTTGCAGACAGCGACCTCATCAGGCGCAGAGTACTCAATAATCTCAGTGCAGAGGTTG 29549 Query 213558 CTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA-ATCCTTGTA 213616 || |||||||| |||||||||| ||||| ||| ||| | |||| ||||||||| Sbjct 29550 GAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTT-GCGGTTGCAGCTATCCTTGTA 29608 Query 213617 GAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCT 213676 ||||||| ||||| || ||||| ||||| | |||| || | ||| || | | | Sbjct 29609 GAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCCAGGATAGAGTACCACAGCTTC-T 29667 Query 213677 GGCCTTGACCACCCGCCTGACAGC-TCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGT 213735 | || | | | ||| | ||| | | ||| |||| || || || | | Sbjct 29668 GAGCTCGGATAGTCTTGCGACCACGTCCCTCCTT---CTCATACTTCTCATACAGAGCCT 29724 Query 213736 TGAATTCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGG-ATGCGGGACACATGAGGCT 213793 |||||| | ||| || | | | | || || || || || ||| ||||| | | Sbjct 29725 CGAATTCCTCGCCATAGCAGTCAG-CAAGGCCAGGGCATTCATTAGGG-CACATCAAAGT 29782 Query 213794 CCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGA 213852 ||| ||| || | |||| ||| | || ||||||||| || |||| ||| || ||| || Sbjct 29783 CCAATCCAAGTTCTTCTC-GACGCGCTTCATGAACAGATCAGGGATCCAGAGAGCGAGGA 29841 Query 213853 ACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAA 213912 ||||||| | || | ||| ||| || ||| ||||| || || || || |||| Sbjct 29842 ACAGGTCACGGGCACGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGGAACTCAA 29901 Query 213913 AGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGC 213969 ||| || |||||||| ||||| | ||||||||||||||| || || | |||| || | Sbjct 29902 AGACATCGGCGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTTCCAC 29961 Query 213970 CCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGG 214029 ||||||| || ||||| ||||||||| || || | ||| | | ||||||| Sbjct 29962 CCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATGGGGATGATACCGTTGG 30021 Query 214030 ACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC---TCAGGTTGCTCATGGAGA 214086 | ||||| || || || ||||| ||||| | ||| | | ||| | | | || Sbjct 30022 AGGTACCGTTTGTGCCGGCGATATAAGAGCCTGTGGCACGGATACGGTGG---ACGTTGA 30078 Query 214087 GCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGC 214146 | || || ||||| || |||||| |||||||| || | ||| ||| || ||| | Sbjct 30079 GGCCGATACCACCAGCCATCTTGGAAATCATGGCACATGTCTTCAAAGTATCGTAGATAC 30138 Query 214147 CGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG-GAC 214205 | | |||||||| || | | || | ||||||||| ||||||| | || || | Sbjct 30139 CCTCAATGCTGTCGTCCTTCATGTCAACCAAGAAGCATGAGGAGAGCT-GAGCTTGCGGG 30197 Query 214206 GAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTG 214265 | |||| |||||| || |||||| |||||| | | || ||| | || | ||| | Sbjct 30198 GTACCAGCGTTGAAGAGGGTGGGGGACGCATGGGTAAAGAATTTGCTGGACATGAGGTGG 30257 Query 214266 TAGGTCTCCAGGAC 214279 || ||||| ||||| Sbjct 30258 TATGTCTCAAGGAC 30271 >seq219 Length=54288 Score = 190 bits (210), Expect = 4e-43 Identities = 492/738 (67%), Gaps = 29/738 (4%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || | ||||| |||||||| ||||| || ||| || |||||||| Sbjct 42470 CTGGTACTCGCCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGAGAAATGTTCTC 42529 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC----CGTGTC--AGGCCCATCTGTTC 47952 ||| ||| |||||||||| | || || | | ||| || || | | | Sbjct 42530 CATAAAGTCAAAGGGGTTGGAGGACTTGTAGATCTTCTCGTTTCCGAGAGCGA------C 42583 Query 47953 CAGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTAT 48012 ||||| |||| || || |||| ||||| | ||| ||| || ||||||||| | Sbjct 42584 AAGCAGACGATCGGCAACAAACTCAATGTACTGCTTCATCAGGTTGGCGTTCATGCCCAG 42643 Query 48013 GAGGGA-CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTAT-CTGCACGGCTTCCCCC 48070 || | || ||| | ||||| || | ||||||| ||| || ||| ||||| || Sbjct 42644 AAGAGCGCAAGGG-AGAGCCTCAGTCAAGAACTCCTGCTCGATTCTG-ACGGCATCAGTG 42701 Query 48071 ACAATCT----GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAG 48126 | || | | | | | | || | | | || || |||||| | | ||| Sbjct 42702 ATGATGTCACGGATAATCTCCTTGCTG-GCGCGGTTCTT---CAGGTGAGAG---TGGAG 42754 Query 48127 CATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCA 48186 || ||| |||||||| |||||| || ||||| || ||||||| ||||||||||| Sbjct 42755 CAGGCAAGCAAAGTCAGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGT 42814 Query 48187 GAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAA 48246 ||||||||||||| || |||| ||||||||||| || | || || | || ||| Sbjct 42815 CAGACCAGGCATGAGACCTCTCTTCTTGAGCCAGAAGATGGAGGCAAAGGCTCCGCTGAA 42874 Query 48247 GAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTC 48306 |||||| ||||| || || || || || ||| | || | || |||| ||||||||| Sbjct 42875 GAAGATACCCTCAACAGCAGCAAAGGCAACGAGACGCTGGGCAAAGGAAGAGTTCTTGTC 42934 Query 48307 TGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366 |||||| | ||||| || |||||||| ||||| || || ||||| || || Sbjct 42935 CTGGATCCACTTGATGGCCCACTCGGCCTTCTTGCGAATGCAAGGGATAGTCTCAATAGC 42994 Query 48367 CCGGAAGAGCTTCTTGCACTCAC-CTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGT 48425 |||||| | ||| || | ||| ||| || ||||| || ||| | || Sbjct 42995 GTTGAAGAGGTAGGTGCGCTGGCTGTGC-TCCTTGACGTAGGTGTCGATGAGCAGAGAGT 43053 Query 48426 ACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAA 48485 | |||| ||||| | ||||| || ||||||||| ||||||||| | ||||| Sbjct 43054 ATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCGG 43113 Query 48486 ACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAG 48545 | ||| || || | ||| | ||| | ||| ||||| ||||| || || || || | Sbjct 43114 GGATCTGAACCTCGCCGCTGAAACGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGAGG 43173 Query 48546 CAGCAAAGAAGGCAAGGA 48563 ||||||||||||| |||| Sbjct 43174 CAGCAAAGAAGGCCAGGA 43191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931516044053760