Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20asperellum_20[genbank_20GCA_5F000733085.2_202015-06-
08] 1,439 sequences; 37,686,724 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq219 248 2e-60
seq135 219 8e-52
>seq219
Length=54288
Score = 248 bits (274), Expect = 2e-60
Identities = 570/857 (67%), Gaps = 24/857 (3%)
Strand=Plus/Minus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | ||||||||||||||| | || |||||||||||| ||||||||||||
Sbjct 43315 ATCTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACCGCCGAGGAGATTGATCTG 43256
Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592
||||||| || ||| |||| || || || | | |||||| || | || ||
Sbjct 43255 TCCAAGGATTTGCACGACTGGAACAACCGC-CTGAACGATGACGAGAAGTACTTCATCTC 43197
Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652
|| | |||| |||||||| ||||| || || || || |||||||| ||| |||| |
Sbjct 43196 TCACATCCTGGCCTTCTTTGCTGCCTCGGACGGCATTGTCAACGAGAACCTGGTCGAGCG 43137
Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712
|||| | | || || ||| | ||||| || ||||||||||||||||| ||
Sbjct 43136 TTTCAGCGGCGAGGTTCAGATCCCCGAGGCTCGATGCTTCTACGGTTTCCAGATCATGAT 43077
Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGC 25772
|| || | ||||| ||| || | ||| | || ||| | | || |
Sbjct 43076 GGAGAACATCCACTCCGAGACATACTCTCTGCTCATCGACACCTACGTCAAGGAGCACAG 43017
Query 25773 CGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCG 25832
| || | || || || || ||| || || |||| | ||||||
Sbjct 43016 CCAGCGCACCTACCTCTTCAACGCTATTGAGACTATCCCTTGCATTCGCAAGAAGGCCGA 42957
Query 25833 GTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTT 25892
||||||||| ||||||||| | | ||| | || | |||| | |||| || || |||||
Sbjct 42956 GTGGGCCATCAAGTGGATCCAGGACAAGAACTCTTCCTTTGCCCAGCGTCTCGTTGCCTT 42897
Query 25893 TGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCA 25952
||||||||| ||||| ||||| |||||||| | ||||| ||||||||||||||||| |
Sbjct 42896 TGCTGCTGTTGAGGGTATCTTCTTCAGCGGAGCCTTTGCCTCCATCTTCTGGCTCAAGAA 42837
Query 25953 GAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCT 26012
|| || |||||| || ||| ||| ||||||||||||||| | |||||||||||
Sbjct 42836 GAGAGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCT 42777
Query 26013 CCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTC--TCAA 26070
|||| || ||||| ||||||||| || | ||| || | || | | |||
Sbjct 42776 GCACACTGACTTTGCTTGCCTGCTCCACTC---TCAC---CTGAAGAACCGCGCCAGCAA 42723
Query 26071 -GAGA----CCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNN 26125
|||| |||| || ||||||| || || || |||||| |||||||
Sbjct 42722 GGAGATTATCCGT-GAC---ATCATCACTGATGCCGTCAGAATCGAGCAGGAGTTCTTGA 42667
Query 26126 NNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTG 26185
||||||||||| || || |||| || |||||||
Sbjct 42666 CTGAGGCTCTCCCTTGCGCTCTTCTGGGCATGAACGCCAACCTGATGAAGCAGTACATTG 42607
Query 26186 AGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTAC-AGTACGCCT 26244
||| ||| ||||| | |||||| | || ||| || | ||||| ||| | ||
Sbjct 42606 AGTTTGTTGCCGATCGTCTGCTTGTCGCTCTCGGAAACGAGAAGATCTACAAGTCCTCC- 42548
Query 26245 AACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAG 26304
||||| || ||||||||||| ||||| || ||| || |||||||||||||| || |||
Sbjct 42547 AACCCCTTTGACTTTATGGAGAACATTTCTCTGGGCGGCAAGACCAACTTCTTCGAGAAG 42488
Query 26305 AGGGTCGGCGACTATCA 26321
| |||||||| || ||
Sbjct 42487 CGTGTCGGCGAGTACCA 42471
>seq135
Length=88816
Score = 219 bits (242), Expect = 8e-52
Identities = 837/1282 (65%), Gaps = 59/1282 (5%)
Strand=Plus/Plus
Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGGAGA 221478
|||||||| |||||||||||||||||||| |||||| || ||| | || ||||| ||
Sbjct 29205 AGGGCAGCATGGTAGATGGTCTCAAAGATTTGCTTGTTCAG-CTCACGAGCTTCGGGTGA 29263
Query 221479 AGTGAAGGGCATACGCAGCATCT--GAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536
|||||| | |||||| | | ||||| | || || |||||||| || || | |||
Sbjct 29264 TTCGAAGGGAAGACGCAG-AGCAAGGAAAG-CATCAGCAAGTCCCTGGACACCAACACCA 29321
Query 221537 ATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGT 221594
||||| | ||| | |||||| | ||| | || ||| || || || |||| || |
Sbjct 29322 ATGGGTCGGTGACGGCTGTTGCTGTTGCGAGC-CTCCTGA-ACAGGGTAGTAGTTCACAT 29379
Query 221595 CGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGA- 221653
|||| | ||||||||| | ||| |||||||| || | |||| ||||
Sbjct 29380 CGATGATGCGGTTGAGGTTACG------GAC---AACCACCTTTGTAA-CTTC--GTGAA 29427
Query 221654 ----TTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAAC 221709
|| || || | || || |||| | | || |||||||| || || |
Sbjct 29428 GCTTTTTAAAGTCA--TAGCATCCTTCGTTGTAG---TCGACAAAAGCAGGGAGAGCCAA 29482
Query 221710 GCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACA 221769
||||| ||| || || || ||||| || | |||| || ||||| || ||
Sbjct 29483 AGAGGCCAAGTTGCAGACAGCGACCTCATCAGGCGCAGAGTACTCAATAATCTCAGTGCA 29542
Query 221770 GAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG-T 221828
||||||| || |||||| ||||||| || || || |||||| ||| |||| |
Sbjct 29543 GAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTG-CAGCTAT 29601
Query 221829 CCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGA 221888
||||||||||||| ||||| |||||||| ||| ||| |||| || || ||| |
Sbjct 29602 CCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCCAGGATAGAGTACCACA 29661
Query 221889 GTTCTCTG-GCGCTCACCGTCCTCTTGACTGCA-CCCTCGGTCTTTTCATAC--CCGGTA 221944
| | |||| || | | ||| | ||| | ||||| ||| |||||| | ||
Sbjct 29662 GCT-TCTGAGCTCGGATAGTCTTGC-GACCACGTCCCTC---CTTCTCATACTTCTCATA 29716
Query 221945 TAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACAC 222004
||||| | | || | || || || || | ||||| || || || |||
Sbjct 29717 CAGAGCCT--CGAATTCCTCGCCATAGCAGTCAGCAAGGCCAGGGCATTCATTAGGGCAC 29774
Query 222005 ATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGC 222064
|||| | |||| | | ||| | | ||| | || |||||| || || |||||||| ||
Sbjct 29775 ATCAAAGTCCAATCCAAGTTCTTCTCGACGCGCTTCATGAACAGATCAGGGATCCAGAGA 29834
Query 222065 GCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAA 222124
|| | || || || | || || ||| ||| ||||| ||| || | || || |
Sbjct 29835 GCGAGGAACAGGTCACGGGCACGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGGTCAAGG 29894
Query 222125 AACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTG 222184
|||||||| | || |||||||| ||||| || |||| ||| | || || || ||||||
Sbjct 29895 AACTCAAAGACATCGGCGTGCCAAGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTG 29954
Query 222185 TTGCCACCCTGATCCACCATCCTCTCCAGAGC-GTTGAAGATGCGAAGGGTCGGTACCAG 222243
|| |||||||| || || || | || | |||||||| ||||| | || | |
Sbjct 29955 TTTCCACCCTGGTCGACGTATCTGGC-AGTGTTGTTGAAGACACGAAGCATGGGGATGAT 30013
Query 222244 TCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGC 222303
|||||||| |||||| ||||| || || | || ||| | || ||| ||
Sbjct 30014 ACCGTTGGAGGTACCGTTTGTGCCGGCGATATAAGAGCCTGTGGCAC---GGATAC-GGT 30069
Query 222304 AGACAT----GCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGT 222359
||| | |||||||||||| || || || |||||||| || |||| | ||| |
Sbjct 30070 GGACGTTGAGGCCGATACCACCAGCCATCTTGGAAATCATGGCACATGTCTTCAAAGTAT 30129
Query 222360 CCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAG 222419
| ||| ||||| || ||| ||||| | || | || || || || || | |||||
Sbjct 30130 CGTAGATACCCTCAATGCTGTCGTCCTTCATGTCAACCAAGAAGCATGAGGAGAGCTGAG 30189
Query 222420 ATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACA 222479
|| | || || ||||| || || ||||| || || |||||| | || ||||
Sbjct 30190 CTTGCGGGGTACCAGCGTTGAAGAGGGTGGGGGACGCATGGGTAAAGAATTTGCTGGACA 30249
Query 222480 TCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATC 222539
| || | ||| ||||| | ||| | | |||||||| || ||| | || ||
Sbjct 30250 TGAGGTGGTATGTCTCAAGGACACGCTCAATGTTGTCTCCCCAAATGCCAACAGCCACTC 30309
Query 222540 TCATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACGA 222597
||| ||||| ||| |||| ||| ||| || | |||| || || || ||
Sbjct 30310 GCATAATCATGTGCTGTGGCCGCTCAACAATCTTGCCATCAAGCT--TCAGGAGATATGA 30367
Query 222598 TTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGC 222657
| ||||| |||||||| || ||||| | | || ||||||| | | | || | |||
Sbjct 30368 TCGCTCCAGGGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCGGTCATAGACAATGGC 30427
Query 222658 GGCGTCCAGCTCCGACTTGTGC 222679
|| ||| |||||| |||||||
Sbjct 30428 GGAGTCAAGCTCCTCCTTGTGC 30449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928828092404160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |